TCONS_00007801-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00007801-protein
Unique NameTCONS_00007801-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length516

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00007801-protein ID=TCONS_00007801-protein|Name=TCONS_00007801-protein|organism=Clytia hemisphaerica|type=polypeptide|length=516bp
MEDQKDFVEEVLKQMSHSYVHLEMKKSLQNEINKANLYSGDIKKHLKKFL
KESGYSVTIQNFIYQRVLEKYNKRYNSSGAYKEPLEYIEKAQITWQKCIV
KSINNMCSELSLPLSRKRNAQDQKVLSQKLENMQLGLEYNDEAYSKLRPV
YSSADFFEVLVNIKNPNLVPSTEGNIEQWGLMQAGLIGSNDIKSELELLN
GKTPQVGIDDVLNASFASEWIAVGQKVIAQRHIAASRQYLKQGCPSGLRK
DIWRTFFNIDITNESIHYYERLKGKVLEYDMLVDYLIMKDVRLTATNDDA
FFVFEDVLHQVMLVFSRDTWMIDQFHHFSNQPPKSYVRGRLGLEEYSVNY
PPCGIFPFHGFSMLAAPLCYIFEKPVELFFVFRQLYSRYFYQLYDISSHP
ESIVSLCSFFEERLQLDEPQVFKHLLEIKAQPLRIVFSWFLFAFSGYLAT
DQTLQLWERVLGFDSLRLLAVLAVAIISYRRENLLGVTTKASAEAVLADI
STIKVIPVLVQYLSNS
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_004432XLOC_004432Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00007801TCONS_00007801Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000195Rab-GTPase-TBC_dom
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000195Rab-GTPase-TBC domainSMARTSM00164tbc_4coord: 240..488
e-value: 6.6E-5
score: 20.9
IPR000195Rab-GTPase-TBC domainPFAMPF00566RabGAP-TBCcoord: 359..485
e-value: 2.8E-13
score: 50.0
IPR000195Rab-GTPase-TBC domainPROSITEPS50086TBC_RABGAPcoord: 243..464
score: 16.771
IPR000195Rab-GTPase-TBC domainSUPERFAMILY47923Ypt/Rab-GAP domain of gyp1pcoord: 402..487

Blast
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BLAST of TCONS_00007801-protein vs. Swiss-Prot (Human)
Match: TBC19 (TBC1 domain family member 19 OS=Homo sapiens GN=TBC1D19 PE=1 SV=2)

HSP 1 Score: 431.795 bits (1109), Expect = 5.398e-147
Identity = 234/514 (45.53%), Postives = 340/514 (66.15%), Query Frame = 0 
Query:    8 VEEVLKQMSHSYVHLEMKKSLQNEINKANLYSGDIKKHLKKFLKESGYSVTIQNFIYQR--VLEKYNKRYNSSGAYKEPLEYIEKAQITWQKCIVKSINNMCSELSLPLSRKRNAQDQKVLSQKLENMQLGLEYNDEAYSKLRPVYSSADFFEVLVNIKNPNLVPSTEGNIE-QWGLMQAGLIGSN--DIKSELELLNGKTPQVGIDDVLNAS---FASEWIAVGQKVIAQRHIAASRQYLKQGCPSGLRKDIWRTFFNIDITNESIHYYERLKGKVLEYDMLVDYLIMKDVRLTATNDDAFFVFEDVLHQVMLVFSRDTWMIDQFHHFSNQPPKSYVRGRLGLEEYSVNYPPCGIFPFHGFSMLAAPLCYIFEKPVELFFVFRQLYSRYFYQLYDISSHPESIVSLCSFFEERLQLDEPQVFKHLLEIKAQPLRIVFSWFLFAFSGYLATDQTLQLWERVLGFDSLRLLAVLAVAIISYRRENLLGVTTKASAEAVLADISTIKVIPVLVQYL 513
            + ++++++  S ++ ++++     + +  +    +K+ +K+F K SG+   +QN +Y    V    +         KEPL Y+ KAQ +W+K I+KS+N+MC+ELS+PL+RKR   +QK L  K   M  G +  D   S  RPVY+  DF EVL+N++NPN       +     GL+Q  L   +  ++K     L     Q+GIDD        F +E + +GQKV+A++  AA++QY++QG P+ LR ++W    NI    E + YYE+LK  V+++D+LVD LI KDV+LTA+NDD +FVFED L+QV+L FSRDT ++  F   S  PPKSY+RG+LGLEEY+V YPP G+ PFHGFSM  APLC+++ +P +L+ +FR++Y R+F++L+ ISSHP  IVSLC  FE  LQ   PQ+F HL EI AQPLRI F W + AFSGYLATDQ L LW+R+LG++SL +LAVLA A+ ++R  NL+ VT+ A+AEAVLAD+ST+KV+P+L  +L
Sbjct:   12 IAQIVQKLKGSNLYSQLERQAWASLQRPEIKLESLKEDIKEFFKISGWEKKLQNAVYSELSVFPLPSHPAAPPEHLKEPLVYMRKAQGSWEKRILKSLNSMCTELSIPLARKRPVGEQKELLNKWNEM--GTDEPD--LSLFRPVYAPKDFLEVLINLRNPNYENGDSLSFRTHLGLIQVPLKVKDIPELKECFVELGLNIGQLGIDDSTQVPPELFENEHVRIGQKVLAEQDSAAAQQYIRQGSPTALRAELWALILNISSQPEDVLYYEQLKTNVIQHDLLVDSLIYKDVKLTASNDDYYFVFEDYLYQVLLCFSRDTSVLSHFAFNSASPPKSYIRGKLGLEEYAVFYPPNGVIPFHGFSMYVAPLCFLYHEPSKLYQIFREMYVRFFFRLHSISSHPSGIVSLCLLFETLLQTYLPQLFYHLREIGAQPLRISFKWMVRAFSGYLATDQLLLLWDRILGYNSLEILAVLAAAVFAFRAVNLMEVTSLAAAEAVLADLSTLKVMPLLQIFL 521
The following BLAST results are available for this feature:
BLAST of TCONS_00007801-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
TBC195.398e-14745.53TBC1 domain family member 19 OS=Homo sapiens GN=TB... [more]
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