TCONS_00007720-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00007720-protein
Unique NameTCONS_00007720-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1881

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00007720-protein ID=TCONS_00007720-protein|Name=TCONS_00007720-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1881bp
MEFLSHKEHDVQQKTLQCLQTYKFPYLKPYHEDFEKLMDDTTFREELVKI
CSVDEPVFKDDHKEHLMPIVIRLLYGKLQRKSGLGMSGKSSLMARRNIIM
QFLAQCNNNEIKTFISLITDPLKLYKDIEIISSVENQSLAISAIVPLQRQ
ISFCNMFSTLVTRLQKQAMYYLPELFHLMLKIVWSNSWCLEHKKEEIWPH
YLGRMKELRTLGIMKLIELFTTIPEFDCQESIDEIFTSAVWPKLAQLPTE
SCQNSTPLFQLVECWSKNSRYFQLLSKENENGLSLISQLFEVLRQNALTS
DMEKKVMIIIQNLLKSEAFEESEEKGKLLTTGQSFKDEETIGIQIVKPYV
ANLLHHFYGKLHSKMSNVTLKTKQKIGNIIPHIQLSILADVSKFVTDADL
CEKLIDIFLPVLHCVASEEVQFNIVTTVQNLLPQTTPTERHLSLFPPLFS
CFHGNKPRDMLCKVYIKMSESYPEIARIAKYVNDLNSWDAKRLEEPDYER
RLAAYRGISDSFEKEAEKWSVDHILPILNNCFFFVDHSNDMSLRDASSSC
IEAVFQMVSRKLKAEREAGQEGSGTKLFEDVFVKCILPSIMQGLKLKNSV
PRHEHIHFLEVLIKTFDHRCLSDLKELTTDDPETDFFQNIKHVQMHRRIR
AVHQLTSKCGEGKLSNKSLYNYLLPMITHFIHDNLSKSKDHNLLTATIEG
IGAIVNGFPWSKYANVLKHYLSLLQKERFNQKTYIRVVVVVLNNFPFDLS
NVIIEEQILKKSDGKKDEKPGIKGSHEKPQEDNKDKDESKETENETEKIV
DMEEEEINEEEMEETNGDEISTRGEVKPRTKQVDQKSAEQICQALSTRIL
PQLHRFFTKKSRVESFHKKSNNHAEDGEDILKVPVAFAIVKLLQHLPKST
LMSNLSGILLRVSQSLKSQARDVRDIARDTLKKIAASLGSSYLSQXRDTL
KKIASSLGSSYLSQVFSQMKSVLQRGYQLHVLGYTVHSILENMQNEMKGG
DLDNCVALIMQIVCEELFGTVAEEKTIQGIVVKLFEAKSKKSNDLIEIVS
TFITSGSFATLIGPLKEVLDTTQDHKTRRKVEEAFRRVSVGLLHNTGVSP
EDHLLFIHGTISNTVSTLFEKRKNKKAAVNHINDADKMNHPSIVREDIYL
MPDKPTRSGVAPSVSKFTNEHVLIEFGLQQLHTGLKRSKFTATNDEHCRM
LDPFIEILVNSLTSKHTRLVTLTMRCVALLVKFSLPALKESMPEITKQIF
KLIKKYARAGSAKGDNFEMIMTSFKTMTIIIRDGKEHKVSTKQLQILMTY
VEEDIYDSSRQATALPLLKAILMRRLASKEITDTMEKIEELSIRDDDNSI
RAQCRQLMMTYLIEYPLGKKMSKHFDFYISNLSYEEETGRISSLEMFAVM
FNKFPYTVLQEYSTYFFIPLVMMLINDESALCKKMAASAVKLLINKLGVG
SPRNDLFDITLNWSKQNKVQLRQVAMQLFGTFIDVEQDTSNNDNFKTRLD
QMVPVLLKTIQDGVKADQDDDESSEDESEAEDNENEAENNINEDSEDHDG
AVQIKKLPMNDKCLYNTLTCVGKIFTKIPGIFTTGADYKINEFLAAITEL
LLHSHAWVRLSSSQLFAVYFSSIPVEEIANTSSNSYLSIDTQAKVKDLCL
IFYEQLKDDQLTKEIADQATKNLIYLFKIVKYLNEGEPNSKAVSNNNAIG
DTDILHDDEEIQNPKKNITIKVLIVKMTRLATFEALKKIKESVKRTCVFR
WIGAVCLDSDHQQLLPHLPDLLKPLYREISNAQKEESDLVKLAHEVLELI
RGQFDKQTFAEVYAKVQKMAHEKRDSRKRKLAVEAVKEPEKFAARKQKLN
LAKREQKKRKLYERKPELKFKKIRSQKATEE
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_004377XLOC_004377Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00007720TCONS_00007720Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011989ARM-like
IPR011430DRIM
IPR016024ARM-type_fold
Vocabulary: Molecular Function
TermDefinition
GO:0005488binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005488 binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 1527..1547
NoneNo IPR availableCOILSCoilCoilcoord: 793..813
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 1..368
e-value: 0.13
score: 10.3
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 382..1659
e-value: 3.0E-44
score: 151.2
coord: 1660..1864
e-value: 9.9E-6
score: 23.8
IPR011430Down-regulated-in-metastasis proteinPFAMPF07539DRIMcoord: 1..597
e-value: 2.6E-138
score: 462.0
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 1709..1715
coord: 1561..1681
coord: 1748..1834
coord: 1494..1514
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 1172..1510
coord: 666..748
coord: 863..953
coord: 399..619

Blast
BLAST of TCONS_00007720-protein vs. Swiss-Prot (Human)
Match: UTP20 (Small subunit processome component 20 homolog OS=Homo sapiens GN=UTP20 PE=1 SV=3)

HSP 1 Score: 982.63 bits (2539), Expect = 0.000e+0
Identity = 625/1929 (32.40%), Postives = 1050/1929 (54.43%), Query Frame = 0
Query:    6 HKEHDVQQKTLQCLQTYKFPYLKPYHEDFEKLMDDTTFREELVKIC-SVDEPVFKDDHKEHLMPIVIRLLYGKLQRKSGLGMSGKSSLMARRNIIMQFLAQCNNNEIKTFISLITDPLKLYKDIE----IISSVENQSLAISAIVPLQRQISFCNMFSTLVTRLQKQAMYYLPELFHLMLKIVWSNSWCLEHKKEEIWPHYLGRMKELRTLGIMKLIELFTTIPEFDCQ-ESIDEIFTSAVWPKLAQLPTESCQNSTPLFQLVECWSKNSRYFQLLSKENENG--LSLISQLFEVLRQNALTSDMEKKVMIIIQNLLKSEAFEESEEKGKLLTTG-------QSFKDEETIGIQIVKPYVANLLHHFYGKLHSKMSNVTLKTKQKIGNIIPHIQLSILADVSKFVTDADLCEKLIDIFLPVLH-CVASEEVQFNIVTTVQNLLPQTTPTERHLSLFPPLFSCFHGNKPRDMLCKVYIKMSESYPEIARIAKYVND---LNSWDAKRLEEPDYERRLAAYRGISDSFEKEAEKWSVDHILPILNNCFFFVDHSNDMSLRDASSSCIEAVFQMVSRKLKAEREAGQEGSGTKLFEDVFVKCILPSIMQGLKLKNSVPRHEHIHFLEVLIKTFDHRC-LSDLKELT-TDDPETDFFQNIKHVQMHRRIRAVHQLTSKCGEGK--LSNKSLYNYLLPMITHFIHDNLSKSKDHNLLTATIEGIGAIVNGFPWSKYANVLKHYLSLLQKERFNQKTYIRVVVVVLNNFPFDLSNVIIEEQILKKSDGKKDEKPGIKGSHEKPQEDNKDKDESKETENETEKIVDMEEEEINEEEMEETNGDE------ISTRGEVKPRTKQVDQKSAEQICQALSTRILPQLHRFFTKKSRVESFHKKSNNHAEDGEDILKVPVAFAIVKLLQHLPKSTLMSNLSGILLRVSQSLKSQARDVRDIARDTLKKIAASLGSSYLSQXRDTLKKIASSLGSSYLSQVFSQMKSVLQRGYQLHVLGYTVHSILENMQNEMKGGDLDNCVALIMQIVCEELFGTVAEEKTIQGIVVKLFEAKSKKSNDLIEIVSTFITSGSFATLIGPLKEVLDTTQDHKTRRKVEEAFRRVSVGLLHNTGVSPEDHLLFIHGTISNTVSTLFEKRKNKKAAVNHINDADKMNHPSIVREDIYLMPDKPTRSGVAPSVSKFTNEHVLIEFGLQQLHTGLKRSKFTATNDEHCRMLDPFIEILVNSLTSKHTRLVTLTMRCVALLVKFSLPALKESMPEITKQIFKLIKKYARAGSAKGDNFEMIMTSFKTMTIIIRDGKEHKVSTKQLQILMTYVEEDIYDSSRQATALPLLKAILMRRLASKEITDTMEKIEELSIRDDDNSIRAQCRQLMMTYLIEYPLGKKMSKHFDFYISNLSYEEETGRISSLEMFAVMFNKFPYTVLQEYSTYFFIPLVMMLINDESALCKKMAASAVKLLINKLGVGSPRNDLFDITLNWSKQNKVQLRQVAMQLFGTFIDVEQDTSNNDNFKTRLDQMVPVLLKTIQDGVKADQDDDESSEDESEAEDNENEAENNINEDSEDHDGAVQIKKLPMNDKCLYNTLTCVGKIFTKIPGIFTTGADYKINEFLAAITELLLHSHAWVRLSSSQLFAVYFSSIPVEEIA---NTSSN----------SYLSIDTQAKVKDLCLIFYEQLKDDQLTKEIADQATKNLIYLFKIVKY---------------LNEGEPNSKAVSNNNAIGDTDILHDDEEIQNPKKNITIKVLIVKMTRLATFEALKKIKESVKRTCVFRWIGAVCLDSDHQQLLPHLPDLLKPLYREISNAQKEESDLVK-LAHEVLELIRGQFDKQTFAEVYAKVQKMAHEKRDSRKRKLAVEAVKEPEKFAARKQKLNLAKREQKKRKLYERKPELKFKKIRSQ 1876
            H++  VQ+ TL C+ TYK P++ PY E+ ++L++D +F+EE+V    S D  V K  H+  L PI++R+LYG+++ K+G    GKS+   R  I+++FLA     EI+ F+ L+ +P++ +K+ E    +I +VE+  L +S ++PL RQ    N    ++  +      YLP++  ++L +  + S  L+ ++E+I   ++  +K LR LGI  + ++F     +  + E ID +F  AVWP++++L +ES  + TPL +L+  WS+N+RYF LL+K+        +++ +F +L    L+      VM I+ +LL    FE +E    LL TG       ++  +  TIG +++ P+V  +L +      SK +    K K+K        +L IL+ +SKF+ D +    LI + LP LH    +E+ + +I+ TVQNLL         L     LFS       R +LC V+    E+  +     KY+ D   LN++D + L++ +++ R   ++ I+ S+ KE +   V++++P+++NCF+ ++   DMSL D +S C+ ++ + ++     E++          + ++  + +L  + +GLK +    + ++   L  LI+TF ++    DL +LT   DPE DFF+N+KH+Q+HRR RA+ +L  +  EGK  LS+KSL NY++P     I D     K  N+ TA  E IGAI     WS Y   LKH++ +LQ  + NQK  + ++V+VL  F FD  +  +EEQ+     GK + +     + E P+ +  + +   E E E       +  +    +  ++ G        I+      P+ K+  +++ + I   ++  ILP+LH+     ++ E  HK   +   + E++++VP+AFA+VKL+Q LP+  + +NL  ILL+V   LK++A+++RDIAR TL KI                      LG  +L  V  ++++ L RGYQ+HVL +TVH +L+ + N+++ GDLD+C+ ++++I   ELFG VAEEK ++ I+ K+ EA+  KS D  EI+  F+       LI PLKE+L  T   K  RKV E  RR++VGL+ N  ++ E  LL  +G IS  +  L EK KN  A             P +  +   L+P  P R G    VS+ TN H+ IE GL+ LH  LK SK  ++ +    MLDPF+ +L++ L S   +++T  ++C+  +++F LP+++    ++TK +F L+K YA+ G+A+G NF +++  FK +TI+++  K ++++ KQLQ+L+ Y EEDIYD+SRQATA  LLKAIL R+L   EI + M K+ +L++       R QCRQ+ + Y+++YPLG K+  + +F ++ L+YE ETGR S+LEM A +F+ FP  +L E    FFIPL +M IND+SA CKKMA+  +K L+ K+ +   ++ LFD+   W    K   RQ+A  + G F++     S   +F+ RL  ++PV+ K I         D E+ +D              I E++E+             D+ L++ LT + K+  +   I  T     +++  + +   L H H WV L+++Q+F + F+S   EE+    NT              +L+ D   K+K + L    QL    L + + +Q  KNL++  K++                 L E E     V+  +   ++D    +E  +   +  T+  LI K++R+A  EA    +  +KRTC+F+++GAV +D    ++ P+LP ++ PL+RE+++   E+  L+K L+ E++EL++     ++F+  +A VQK A+EKR  RK++ A+E V  P+  A +K K +  K E KKRK+   +P  K K+ +S 
Sbjct:  947 HQDQMVQKITLDCIMTYKHPHVLPYRENLQRLLEDRSFKEEIVHFSISEDNAVVKTAHRADLFPILMRILYGRMKNKTGSKTQGKSASGTRMAIVLRFLAGTQPEEIQIFLDLLFEPVRHFKNGECHSAVIQAVED--LDLSKVLPLGRQHGILNSLEIVLKNISHLISAYLPKILQILLCMTATVSHILD-QREKIQLRFINPLKNLRRLGIKMVTDIFLDWESYQFRTEEIDAVFHGAVWPQISRLGSESQYSPTPLLKLISIWSRNARYFPLLAKQKPGHPECDILTNVFAILSAKNLSDATASIVMDIVDDLLNLPDFEPTETVLNLLVTGCVYPGIAENIGESITIGGRLILPHVPAILQYL-----SKTTISAEKVKKKKNRAQVSKELGILSKISKFMKDKEQSSVLITLLLPFLHRGNIAEDTEVDILVTVQNLLKHCVDPTSFLKPIAKLFSVIKNKLSRKLLCTVF----ETLSDFESGLKYITDVVKLNAFDQRHLDDINFDVRFETFQTIT-SYIKEMQIVDVNYLIPVMHNCFYNLE-LGDMSLSDNASMCLMSIIKKLAALNVTEKD----------YREIIHRSLLEKLRKGLKSQTESIQQDYTTILSCLIQTFPNQLEFKDLVQLTHYHDPEMDFFENMKHIQIHRRARALKKLAKQLMEGKVVLSSKSLQNYIMPYAMTPIFDE-KMLKHENITTAATEIIGAICKHLSWSAYMYYLKHFIHVLQTGQINQKLGVSLLVIVLEAFHFD--HKTLEEQM-----GKIENEENAIEAIELPEPEAMELERVDEEEKEYTCKSLSDNGQPGTPDPADSGGTSAKESECITKPVSFLPQNKEEIERTIKNIQGTITGDILPRLHKCLASTTKREEEHKLVKSKVVNDEEVVRVPLAFAMVKLMQSLPQEVMEANLPSILLKVCALLKNRAQEIRDIARSTLAKII-------------------EDLGVHFLLYVLKELQTTLVRGYQVHVLTFTVHMLLQGLTNKLQVGDLDSCLDIMIEIFNHELFGAVAEEKEVKQILSKVMEARRSKSYDSYEILGKFVGKDQVTKLILPLKEILQNTTSLKLARKVHETLRRITVGLIVNQEMTAESILLLSYGLISENLPLLTEKEKNPVAPAPD---------PRLPPQSCLLLPPTPVRGGQKAVVSRKTNMHIFIESGLRLLHLSLKTSKIKSSGECVLEMLDPFVSLLIDCLGSMDVKVITGALQCLIWVLRFPLPSIETKAEQLTKHLFLLLKDYAKLGAARGQNFHLVVNCFKCVTILVKKVKSYQITEKQLQVLLAYAEEDIYDTSRQATAFGLLKAILSRKLLVPEIDEVMRKVSKLAVSAQSEPARVQCRQVFLKYILDYPLGDKLRPNLEFMLAQLNYEHETGRESTLEMIAYLFDTFPQGLLHENCGMFFIPLCLMTINDDSATCKKMASMTIKSLLGKISL-EKKDWLFDMVTTWFGAKKRLNRQLAALICGLFVE-----SEGVDFEKRLGTVLPVIEKEI---------DPENFKD--------------IMEETEEKAA----------DRLLFSFLTLITKLIKECNIIQFTKPAETLSKIWSHVHSHLRHPHNWVWLTAAQIFGLLFASCQPEELIQKWNTKKTKKHLPEPVAIKFLASDLDQKMKSISLASCHQLHSKFLDQSLGEQVVKNLLFAAKVLYLLELYCEDKQSKIKEDLEEQEALEDGVACADEKAESDGEEKEEVKEELGRPATLLWLIQKLSRIAKLEAAYSPRNPLKRTCIFKFLGAVAMDLGIDKVKPYLPMIIAPLFRELNSTYSEQDPLLKNLSQEIIELLKKLVGLESFSLAFASVQKQANEKRALRKKRKALEFVTNPDIAAKKKMKKHKNKSEAKKRKIEFLRPGYKAKRQKSH 2776          
The following BLAST results are available for this feature:
BLAST of TCONS_00007720-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
UTP200.000e+032.40Small subunit processome component 20 homolog OS=H... [more]
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