TCONS_00007612-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00007612-protein
Unique NameTCONS_00007612-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length683

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00007612-protein ID=TCONS_00007612-protein|Name=TCONS_00007612-protein|organism=Clytia hemisphaerica|type=polypeptide|length=683bp
MKWYHSYETLELNTPSRLDGVDFEEEARYRKEGARFIMDIGNKLGLPYIT
MASGIVFYHRFYMFHSFKEFSRWVTATTCLFLAGKVEETPKKCRDIIKMT
HQSLPEYRFKAFGDNPTEEIMVIERILLQTIKFDLHLNHPYTYLIKFGKL
LKGDMEKINGFVQKAWIFINDSLSTTLCLRYKPQVIGLAVLLLSFKLSNQ
NIRDFMGKPRTDWWKIFYPEAKEPDLEDICEELTNMYSGKPPKRRFANVV
NITDKVKNSPKNAPGSPQTKKSKLTSESSQSTTTTTTTSSVTSTTATTTT
SAATVTTSSNTPSTTSISTVATTTASTTSAPLPPLNITNEVSNKPKTLPN
DNVAVKPPLPTGGAEPMQLATPTTNVKVSFPSSNSVTSTPSKAPSLDPPY
PPHSAHGEAPPHLPHSQQPMMKPNSFSNEPQHHHHQQQPPPLKTHRHEQL
KTYLHQNSPNSSQSGFTQQQQNSPYKATAPILDHMSSFFQSTPPSKSQQP
PPLNKPPRSFGQQQNQQNSPAHVMQPSTPPISMMEQLTKQRLPLTPNLKP
APPLPQMPPQQQQQQQQQQQQRFNNNFNQFNNQPPQLQQNLSNFQPQLAP
PPQIPPAFGVQNNNFMPMPPQGPQQQQPFMNNQGNNAPMNNFNNFNPPQQ
QQQPPMMMQNQNPRPPLQNQMNPQHPPYPGNFY
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_004297XLOC_004297Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00007612TCONS_00007612Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013763Cyclin-like
IPR006671Cyclin_N
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013763Cyclin-likeSMARTSM00385cyclin_7coord: 35..129
e-value: 1.8E-10
score: 50.8
coord: 142..235
e-value: 0.97
score: 10.9
IPR013763Cyclin-likeGENE3D1.10.472.10coord: 2..149
e-value: 1.3E-36
score: 125.0
IPR013763Cyclin-likeGENE3D1.10.472.10coord: 150..245
e-value: 1.3E-22
score: 79.6
IPR013763Cyclin-likeSUPERFAMILY47954Cyclin-likecoord: 2..136
IPR013763Cyclin-likeSUPERFAMILY47954Cyclin-likecoord: 138..238
IPR006671Cyclin, N-terminalPFAMPF00134Cyclin_Ncoord: 10..135
e-value: 6.8E-15
score: 54.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 646..683
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 254..446
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 486..529
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 544..609
NoneNo IPR availableCDDcd00043CYCLINcoord: 30..128
e-value: 2.82411E-13
score: 65.3376
NoneNo IPR availableCDDcd00043CYCLINcoord: 139..197
e-value: 1.75833E-5
score: 42.2257

Blast
[Close]
BLAST of TCONS_00007612-protein vs. Swiss-Prot (Human)
Match: CCNK (Cyclin-K OS=Homo sapiens GN=CCNK PE=1 SV=2)

HSP 1 Score: 289.271 bits (739), Expect = 5.339e-89
Identity = 129/237 (54.43%), Postives = 173/237 (73.00%), Query Frame = 0 
Query:    3 WYHSYETLELNTPSRLDGVDFEEEARYRKEGARFIMDIGNKLGLPYITMASGIVFYHRFYMFHSFKEFSRWVTATTCLFLAGKVEETPKKCRDIIKMTHQSLPEYRFKAFGDNPTEEIMVIERILLQTIKFDLHLNHPYTYLIKFGKLLKGDMEKINGFVQKAWIFINDSLSTTLCLRYKPQVIGLAVLLLSFKLSNQNIRDFMGKPR-TDWWKIFYPEAKEPDLEDICEELTNMYS 238
            WY   + L  +TPS+L+G+D   EARYR+EGARFI D+G +LGL Y T+A+GI+++HRFYMFHSFK+F R+VT   CLFLAGKVEETPKKC+DIIK     L + +F  FGD+P EE+MV+ERILLQTIKFDL + HPY +L+K+ K LKGD  KI   VQ AW F+NDSL TTL L+++P++I +AV+ L+ +L    I+++  KP    WW+ F  +     LEDIC ++ ++YS
Sbjct:   24 WYWDKKDLA-HTPSQLEGLDPATEARYRREGARFIFDVGTRLGLHYDTLATGIIYFHRFYMFHSFKQFPRYVTGACCLFLAGKVEETPKKCKDIIKTARSLLNDVQFGQFGDDPKEEVMVLERILLQTIKFDLQVEHPYQFLLKYAKQLKGDKNKIQKLVQMAWTFVNDSLCTTLSLQWEPEIIAVAVMYLAGRLCKFEIQEWTSKPMYRRWWEQFVQDVPVDVLEDICHQILDLYS 259
The following BLAST results are available for this feature:
BLAST of TCONS_00007612-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CCNK5.339e-8954.43Cyclin-K OS=Homo sapiens GN=CCNK PE=1 SV=2[more]
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