TCONS_00007541-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00007541-protein
Unique NameTCONS_00007541-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length288

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00007541-protein ID=TCONS_00007541-protein|Name=TCONS_00007541-protein|organism=Clytia hemisphaerica|type=polypeptide|length=288bp
MALDFGAGCLGGAAGVVVGQPFDTVKVRLQVPKASYRGVFHCFTTMVKEE
SIFSLYKGMTPPLLGVAFQNAILFGLQGYFRRFVDDSVSGEMIAGALTGA
SQAIVTAPIEHAKIKLQIQGTGCPTQNTRRYKGPIQTILQIRRESGTKSC
FRGLLGVVLRDMPGTAIYFGSFSFLNQFFIPEGGDINSLRPATLLFTGGL
AGMLSWAAFYPIDVIKTRIQAEGLQPHGRYASYTDCAVVSFKEEGYTWMT
RGFGATMLRAFPVNAAIFATVTLIYRYMRSQSSDEYDD
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_004264XLOC_004264Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00007541TCONS_00007541Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002067Mit_carrier
IPR023395Mt_carrier_dom
IPR018108Mitochondrial_sb/sol_carrier
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0055085 transmembrane transport
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002067Mitochondrial carrier proteinPRINTSPR00926MITOCARRIERcoord: 250..268
score: 24.94
coord: 104..118
score: 42.3
coord: 204..222
score: 32.61
coord: 91..104
score: 19.32
coord: 153..173
score: 30.44
IPR023395Mitochondrial carrier domainGENE3D1.50.40.10coord: 1..278
e-value: 5.1E-72
score: 241.6
IPR023395Mitochondrial carrier domainSUPERFAMILY103506Mitochondrial carriercoord: 3..270
IPR018108Mitochondrial substrate/solute carrierPFAMPF00153Mito_carrcoord: 87..179
e-value: 2.8E-16
score: 59.1
coord: 189..279
e-value: 4.7E-17
score: 61.6
coord: 4..84
e-value: 2.6E-19
score: 68.8
IPR018108Mitochondrial substrate/solute carrierPROSITEPS50920SOLCARcoord: 86..178
score: 21.397
IPR018108Mitochondrial substrate/solute carrierPROSITEPS50920SOLCARcoord: 189..277
score: 19.338
IPR018108Mitochondrial substrate/solute carrierPROSITEPS50920SOLCARcoord: 1..83
score: 22.191

Blast
[Close]
BLAST of TCONS_00007541-protein vs. Swiss-Prot (Human)
Match: MCATL (Mitochondrial basic amino acids transporter OS=Homo sapiens GN=SLC25A29 PE=1 SV=2)

HSP 1 Score: 249.21 bits (635), Expect = 4.610e-82
Identity = 130/287 (45.30%), Postives = 179/287 (62.37%), Query Frame = 0 
Query:    1 MALDFGAGCLGGAAGVVVGQPFDTVKVRLQV---PKASYRGVFHCFTTMVKEESIFSLYKGMTPPLLGVAFQNAILFGLQGY-FRRFVDDSVSGEMIAGALTGASQAIVTAPIEHAKIKLQIQGTGCPTQNTRRYKGPIQTILQIRRESGTKSCFRGLLGVVLRDMPGTAIYFGSFSFLNQFFIPEGGDINSLRPATLLFTGGLAGMLSWAAFYPIDVIKTRIQAEGLQPHGRYASYTDCAVVSFKEEGYTWMTRGFGATMLRAFPVNAAIFATVTLIYRYMRSQSS 283
            MALDF AGC GG AGV+VG PFDTVKVRLQV    K  YRG  HCF +++K+ES+  LYKG+  PL+G+ F NA++FG+QG   R    DS   + +AGA  GA Q ++  P+E AK +LQ+Q  G      R YKG +  + QI    G +   RG++  +LR+ P   +YF ++  L +    E GD   L    LL  GG +G++SW + YP+DV+K+R+QA+GL+   RY    DC   S++ EG+   TRG  +T+LRAFPVNAA FATVT++  Y R + +
Sbjct:    1 MALDFLAGCAGGVAGVLVGHPFDTVKVRLQVQSVEKPQYRGTLHCFKSIIKQESVLGLYKGLGSPLMGLTFINALVFGVQGNTLRALGHDSPLNQFLAGAAAGAIQCVICCPMELAKTRLQLQDAG----PARTYKGSLDCLAQIYGHEGLRGVNRGMVSTLLRETPSFGVYFLTYDALTRALGCEPGD--RLLVPKLLLAGGTSGIVSWLSTYPVDVVKSRLQADGLRGAPRYRGILDCVHQSYRAEGWRVFTRGLASTLLRAFPVNAATFATVTVVLTYARGEEA 281
The following BLAST results are available for this feature:
BLAST of TCONS_00007541-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
MCATL4.610e-8245.30Mitochondrial basic amino acids transporter OS=Hom... [more]
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