TCONS_00007483-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00007483-protein
Unique NameTCONS_00007483-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length843

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00007483-protein ID=TCONS_00007483-protein|Name=TCONS_00007483-protein|organism=Clytia hemisphaerica|type=polypeptide|length=843bp
MMCIIYTLWISLTFLLLSMVRCSLVTMRGGEYIVKDLRGEKIHSETLHVV
FQFKTIDPSSLLLFSVNHQLGDFISLELIGGKLRYKGRLGDEDKGAQEMI
VGGDALLNDYQWHVVDLKLNKRTVTIELDYQPHTKTFEGAYEVLDLDGDV
YLGGVSSTLDVSQYGITVRRYSGCLRNFFFNDDDFLYKTKYSKPTYSSYG
DLLWNKCENIDYQPIMFKSPQEYALVPTYLKHSLSLTFKFRTLIGSGLLF
SKVSKAVTATLYLKETKLFLSVRIGEGNGPIIMTQGADLDDGFWHRVEIS
ITTKHIMLKLDQLSELKHHSPFSHLVSFHKSNGTLGGGEEHIMKGFVGCM
YNIWMDNTLIDYRKLHPVYSAGVLRKCELKDYCLFQPCRNGGRCTQNHKS
YKCDCINTMYSGPTCEESVFQRSCQEYKELGLHEDAYCTIDPDGDQAQIK
PFRVLCNMTRYSHKAVTIFEHQLPTDEIQISKGVIEGQSYHHNIDYAIDL
DTFDYLLQHATHCQQHVNFKCKNARLMNSPLGPAETVWIGRQGHDEQYWG
GAKPDSGSCACRYDKSCAKPYRYCNCDVGDDVWRSDAGYLNQTDRLPVVM
MSFKLTANQSFFSVGHLECQFNATAIPQNLSKFRALKACTPLNQRPTSRP
HVTNPSIKQNERILSWDRKKPNFNYGRKNPTKEQGYVGPFVPKVNVNVTV
ELPKILEKQGEEGLKFTLSVYAVIVIAVATVIVVIIIAIVIIAKRCQGLR
NGGRATSEHDMDDYEREDGAAANEMCTFFGSYSRPSNSNRPVIEVHRHSI
HCDTIDELPPAYREFAHGYGHQPITTHIDLSYKPHKKSFGMFC
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_004219XLOC_004219Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00007483TCONS_00007483Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001791Laminin_G
IPR014716Fibrinogen_a/b/g_C_1
IPR000742EGF-like_dom
IPR002181Fibrinogen_a/b/g_C_dom
IPR013320ConA-like_dom
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001791Laminin G domainSMARTSM00282LamG_3coord: 45..183
e-value: 2.1E-25
score: 100.4
coord: 232..358
e-value: 2.0E-13
score: 60.6
IPR001791Laminin G domainPFAMPF02210Laminin_G_2coord: 240..357
e-value: 3.4E-13
score: 50.2
coord: 53..182
e-value: 1.2E-19
score: 71.1
IPR001791Laminin G domainPROSITEPS50025LAM_G_DOMAINcoord: 213..377
score: 24.086
IPR001791Laminin G domainPROSITEPS50025LAM_G_DOMAINcoord: 24..207
score: 29.645
IPR014716Fibrinogen, alpha/beta/gamma chain, C-terminal globular, subdomain 1GENE3D3.90.215.10coord: 418..775
e-value: 2.1E-5
score: 23.9
NoneNo IPR availableGENE3D2.60.120.200coord: 23..191
e-value: 1.4E-25
score: 89.6
NoneNo IPR availableGENE3D2.60.120.200coord: 192..374
e-value: 6.3E-22
score: 77.8
NoneNo IPR availableGENE3D2.10.25.10coord: 375..417
e-value: 1.6E-8
score: 33.9
NoneNo IPR availableCDDcd00054EGF_CAcoord: 381..416
e-value: 7.62735E-4
score: 37.231
NoneNo IPR availableCDDcd00110LamGcoord: 28..181
e-value: 6.61537E-25
score: 101.341
NoneNo IPR availableCDDcd00110LamGcoord: 214..356
e-value: 5.56672E-19
score: 84.0068
NoneNo IPR availableSUPERFAMILY57196EGF/Laminincoord: 381..417
IPR000742EGF-like domainPROSITEPS50026EGF_3coord: 379..416
score: 16.235
IPR002181Fibrinogen, alpha/beta/gamma chain, C-terminal globular domainSUPERFAMILY56496Fibrinogen C-terminal domain-likecoord: 409..471
IPR013320Concanavalin A-like lectin/glucanase domainSUPERFAMILY49899Concanavalin A-like lectins/glucanasescoord: 213..383
IPR013320Concanavalin A-like lectin/glucanase domainSUPERFAMILY49899Concanavalin A-like lectins/glucanasescoord: 24..183

Blast
BLAST of TCONS_00007483-protein vs. Swiss-Prot (Human)
Match: CNTP2 (Contactin-associated protein-like 2 OS=Homo sapiens GN=CNTNAP2 PE=1 SV=1)

HSP 1 Score: 254.988 bits (650), Expect = 5.086e-71
Identity = 186/631 (29.48%), Postives = 301/631 (47.70%), Query Frame = 0
Query:   37 LRGEKIHSETLHVVFQFKTIDPSSLLLFSVNHQLGDFISLELIGGKLRYKGRLGDEDKG---AQEMIVGGDALLNDYQWHVVDLKLNKRTVTIELDYQPHTKTFEGAYEVLDLDGDVYLGGVSSTLDVSQYGITVRRYSGCLRNFFFNDDDFLYKTKYSKPTYSSYGDLLWNKCENIDYQPIMFKSPQEYALVPTYLKHSL-SLTFKFRTLIGSGLL-FSKVSKAV-TATLYLKETKLFLSVRIGEGN-GPIIMTQGADLDDGFWHRVEISITTKHIMLKLD--QLSELKHHSPFSHLVSFHKSNGTLGGGEEHIMKGFV----------------GCMYNIWMDNTLIDYRKL---HPVYSAGV-LRKCELKDYCLFQPCRNGGRCTQNHKSYKCDCINTMYSGPTCEESVFQRSCQEYKELGLHEDAYCTIDPDGDQAQIKPFRVLCNMTRYSHKAVTIFEHQLPTDEIQISKGVIEGQSYHHNID---YAIDLDTFDYLLQHATHCQQHVNFKCKNARLMNSPLGPAETVWIGRQGHDEQYWGGAKPDSGSCACRYDKSCAKPYRYCNCDVGDDVWRSDAGYLNQTDRLP---VVMMSFKLTANQSFFSVGHLECQ-----FNATAIP 627
             R +K+ +    +   FKT +   ++L     Q GD+I+LEL   KL     LG    G       ++ G +LL+D+ WH V ++   R++ + LD         G ++ LDLD ++  GG+  +   S    + + + GC+ +  +N  +     +  K   S+ G+L ++  E   Y   +F +   Y  VP  L   L S++F+FRT   +GLL FS  +  +    + L E+K+ + + I +     I ++ G+ L+DG WH V         +L +D  + S ++ +SP             +  GE++   GF+                GCM  I +D+ L++  ++    P   A V +  C + D C+   C +GG+C+Q   S+KC C  T YSG TC  S+++ SC+ YK LG   + Y  IDPDG    + P +V CNMT    K  TI  H L     Q+   V+      +++    Y+  +D    +   A +C+Q+V++ CK +RL+N+P G   T W+G+      YWGG+ P    CAC  +++C  P  YCNCD     WR DAG+L+  D LP   VV+       +++  SVG L CQ     +NA + P
Sbjct:  200 FRNKKMKTLKDVIALNFKTSESEGVILHGEGQQ-GDYITLELKKAKLVLSLNLGSNQLGPIYGHTSVMTG-SLLDDHHWHSVVIERQGRSINLTLDRSMQHFRTNGEFDYLDLDYEITFGGIPFSGKPSSS--SRKNFKGCMESINYNGVNITDLARRKKLEPSNVGNLSFSCVE--PYTVPVFFNATSYLEVPGRLNQDLFSVSFQFRTWNPNGLLVFSHFADNLGNVEIDLTESKVGVHINITQTKMSQIDISSGSGLNDGQWHEVRFLAKENFAILTIDGDEASAVRTNSPLQ-----------VKTGEKYFFGGFLNQMNNSSHSVLQPSFQGCMQLIQVDDQLVNLYEVAQRKPGSFANVSIDMCAIIDRCVPNHCEHGGKCSQTWDSFKCTCDETGYSGATCHNSIYEPSCEAYKHLGQTSNYYW-IDPDG-SGPLGPLKVYCNMTE--DKVWTIVSHDL-----QMQTPVVGYNPEKYSVTQLVYSASMDQISAITDSAEYCEQYVSYFCKMSRLLNTPDGSPYTWWVGKANEKHYYWGGSGPGIQKCACGIERNCTDPKYYCNCDADYKQWRKDAGFLSYKDHLPVSQVVVGDTDRQGSEAKLSVGPLRCQGDRNYWNAASFP 804          

HSP 2 Score: 85.1149 bits (209), Expect = 9.718e-17
Identity = 56/210 (26.67%), Postives = 92/210 (43.81%), Query Frame = 0
Query:  212 YQPIMFKSPQEYALVPTYL-KHSLSLTFKFRTLIGSGLLFSKVSKAVTATLYLKE-TKLFLSVRIGEGNGPIIMTQGADLDDGFWHRVEISITTKHIMLKLDQLSELKHHSPFSHLVSFHKSNGTLGGGEEHIMKGFVGCMYNIWMDNTLIDYRKLHPVYSAGVLRKCELKDYCLFQPCRNGGRCTQNHKSYKCDCINTMYSGPTCEESV 419
            +    F +P  Y    T+  + S  ++F F+TL   G+    + K     L LK  T++  S  +G G   I++     L+D  WHRV      K   L++D+L +    +P          +    GG     +GF+GC+ ++ M+   +D  +   V ++G +  C          C NGG+C + +  Y CDC NT Y G  C + V
Sbjct:  798 WNAASFPNPSSYLHFSTFQGETSADISFYFKTLTPWGVFLENMGKEDFIKLELKSATEVSFSFDVGNGPVEIVVRSPTPLNDDQWHRVTAERNVKQASLQVDRLPQQIRKAPTEGHTRLELYSQLFVGGAGG-QQGFLGCIRSLRMNGVTLDLEERAKV-TSGFISGCSGHCTSYGTNCENGGKCLERYHGYSCDCSNTAYDGTFCNKDV 1005          
The following BLAST results are available for this feature:
BLAST of TCONS_00007483-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CNTP25.086e-7129.48Contactin-associated protein-like 2 OS=Homo sapien... [more]
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