TCONS_00007371-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00007371-protein
Unique NameTCONS_00007371-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2113

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00007371-protein ID=TCONS_00007371-protein|Name=TCONS_00007371-protein|organism=Clytia hemisphaerica|type=polypeptide|length=2113bp
YLKLDLTVLAEGDLVKEAPALDDDDIDSNPLLPDGLPPELNSGMLAAVRK
AFSGETRLRDLADPFVTITFAGQEASTKVIEKCYDPEWNEEITFCDLFPS
LCRRIKVQLRDKDVTKIETVGTTWIDLSEISNNNANVHKYNDAINFPPTF
GPTWVNLYGSTRDFSFIDKDQQLNEGMEEGIGYRGRILMYIKTTEGESAS
NDEICNINVKAAFPISDLAPGKEETFQLFCCIYEASMIHKANADKPCRFE
MNIGNYGNTIDGKMISFKDDDDDNDDEEXTIDGKMISFKDDDDDNDDEED
EDPFVRPLTKEYDCESADKEYYHIPFGARKPTMGIRFPWEDHRRRCYLTN
IMEKLKMKLEDELDDVRTLLSIDSQDTYLYLQDALKEFISYCDVISGNLS
KITGAKAGVTLLDEKRRKLCEKETEVMQKQAKSILDELKDNKRIEKHYFK
VLKILNRIDKIMIEPQNAIPDVFLWLMSGGKRKCYVRIPVNQLMYSPIEA
ESGKNAGRKQTYLLSLPGKAGYGEAGWAIHCKLTCLIWLGVMKNKNDMLI
DAPEEFDVIPANSRKSTAPVPTQLKYLCKHKYILRAHLYQARGLIGSDDS
GLSDAFARVVFNNQAAETRIIYETRNPTWNQMLILFDLTIWGDIDPVVEN
PPTIMIEIFDYDPGGEIEFIGRVMARPLVKKADSPYEGPLFPPKLEWFQI
YRGDLPAGEMLAAFELFQVHPEEAELAAKMKQAQDEGQIYELTPEELEEN
KSNIPLEEAIQEIDEYEIVYFIVPLNIQPVMEMRTIEVLFWGVRELKPIS
FYKTVEKPQVFVDCVGKGVASPIIESVKKNPNFEEPYNKFELMLPIEDRY
CPPLTFSVKEEHMFGNEFLIGTAIVKSLLRFQVPEEAYFQVITPVGGGGD
APPVAGSQAAKSASGCKGGGSKGGGIDNKGFEGDATGSKAGSKIGTKAVS
KAASVIGSVVKSVTFVPEGMEELGSGHKTPSRKSILKTPSRAPSPAASQA
GSFAGSRRGSLAPPSVAGSRVGSVAGSRALSVAGSQQQGSRKGSFAGSRA
GSLIPGSKAGSIALSQRAGSLISGLNSRPPSRAGSRLQSLLATPSRQSIY
SRTSQKIDILPTPAKMSLGTIEHSSTIHHHIVSNPGSSRRASISRRRSIT
SATSRLGSIKEKSPSIKASESVQATPRKKSFSGSEPVTPFKKLMSQKGSP
EKTPLLSQEGGDVAEILDEELYPEDELFGGSQPASRARSATGSNKKSLIE
QISTPIRSIGSKLATPLQSLKKSTSGSIAGDDPEDIELQMGAEASDFYDQ
SLPPLDETAEEEHAFDENGDPIPPDPQGIEGVEVEGGEGGEGAEGEAAEG
ETPAEGEAAADGAKGAEGGEGGGEGGEEDEEGEEESNKTPAIEYGLDELK
ALKEALKKEEQEDGDDEADPEEEEGDGDNEEQIDWWSRFYETIKDKKRVE
EAIAKKTKKIKKEREKQGKKFDLEEEEQSGAFDGIEEDVMKKNLMINPKI
VRIKIYNTELEDVECFSGFNDVLHSFVLLRGKSNGNDDDDERRIFGKFKG
AIKVWKHPLPDFFKNPSLVLGSFQMLPTRDPLDVLCRVYIVRALNLTATD
AGGSADPYIQLRIGKTVIKDVEGKIENNLNPTFGRKFDIQIKIPQDNMLT
VSIYDMDTLSSTLIGETKIDVEDRFFSKHKATCGMHSKYHICGFNKWRDP
IKPTAILRRLCKDHGLIGPTFKTQDDSKTCLIATEQERYKFHAEKYIVDE
SGNQKESEEPAALTALHYFHKIDTKGYALVPEHVETRKLFAPSAPGLEQG
RVQLWVDLFDMDGPSPDAAVDITPRKPTAFELRVIIWNTEDVELGDINIL
TGQPCADIYVKGWLEGLKHQAQQTDVHGSSLTGEGNFNWRFIFPFKYHKA
EDKVVIIKKSLFTTTEEKMPGRLVLHCYDSDALSSDDFIGDITLQLNSCL
KPTKTSKECKLETALENEDRFDIFKKKTMRGWWPFILDTEDEEPKVNGKV
DAELQLLTAQESEEKPAGKGRNDPDALPPPNRPDLAMEWMMNPLKAFRYF
LWEQYKFCLAKFVVLAVIGAIMGLFFYSMPNKSHHQQVYNSSMDGESSIS
IHFPVCCPTRCQQ
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_004146XLOC_004146Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00007371TCONS_00007371Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000008C2_dom
IPR012561Ferlin_B-domain
IPR032362Ferlin_C
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 1446..1466
NoneNo IPR availableCOILSCoilCoilcoord: 1392..1416
NoneNo IPR availableCDDcd04017C2D_Ferlincoord: 582..719
e-value: 2.77751E-62
score: 210.477
NoneNo IPR availableCDDcd04018C2C_Ferlincoord: 34..185
e-value: 1.95136E-60
score: 205.559
NoneNo IPR availableCDDcd04037C2E_Ferlincoord: 1587..1707
e-value: 3.32127E-46
score: 163.875
NoneNo IPR availableCDDcd08374C2F_Ferlincoord: 1831..1961
e-value: 6.89029E-55
score: 189.026
IPR000008C2 domainSMARTSM00239C2_3ccoord: 3..139
e-value: 1.9E-6
score: 37.4
coord: 1831..1958
e-value: 2.3
score: 13.9
coord: 1585..1683
e-value: 5.0E-5
score: 32.7
coord: 583..691
e-value: 1.0E-6
score: 38.3
IPR000008C2 domainGENE3D2.60.40.150coord: 568..720
e-value: 4.1E-18
score: 65.2
IPR000008C2 domainPFAMPF00168C2coord: 583..674
e-value: 2.3E-9
score: 37.4
coord: 1856..1956
e-value: 0.054
score: 13.7
coord: 60..140
e-value: 4.8E-12
score: 46.0
coord: 1587..1675
e-value: 4.8E-13
score: 49.2
IPR000008C2 domainGENE3D2.60.40.150coord: 1582..1709
e-value: 1.3E-16
score: 60.3
IPR000008C2 domainGENE3D2.60.40.150coord: 1749..2005
e-value: 1.3E-17
score: 63.3
IPR000008C2 domainGENE3D2.60.40.150coord: 781..891
e-value: 1.8E-4
score: 21.0
IPR000008C2 domainGENE3D2.60.40.150coord: 17..148
e-value: 1.2E-14
score: 53.7
IPR000008C2 domainPROSITEPS50004C2coord: 29..124
score: 10.59
IPR000008C2 domainPROSITEPS50004C2coord: 1587..1668
score: 12.055
IPR000008C2 domainPROSITEPS50004C2coord: 584..674
score: 11.359
IPR000008C2 domainSUPERFAMILY49562C2 domain (Calcium/lipid-binding domain, CaLB)coord: 776..876
IPR000008C2 domainSUPERFAMILY49562C2 domain (Calcium/lipid-binding domain, CaLB)coord: 580..717
IPR000008C2 domainSUPERFAMILY49562C2 domain (Calcium/lipid-binding domain, CaLB)coord: 1569..1699
IPR000008C2 domainSUPERFAMILY49562C2 domain (Calcium/lipid-binding domain, CaLB)coord: 60..136
IPR000008C2 domainSUPERFAMILY49562C2 domain (Calcium/lipid-binding domain, CaLB)coord: 1800..1954
IPR012561Ferlin B-domainSMARTSM01201FerB_2coord: 465..541
e-value: 6.6E-28
score: 108.7
IPR012561Ferlin B-domainPFAMPF08150FerBcoord: 465..540
e-value: 1.3E-22
score: 80.1
IPR032362Ferlin, C-terminal domainPFAMPF16165Ferlin_Ccoord: 1997..2082
e-value: 3.6E-22
score: 78.9

Blast
BLAST of TCONS_00007371-protein vs. Swiss-Prot (Human)
Match: OTOF (Otoferlin OS=Homo sapiens GN=OTOF PE=1 SV=3)

HSP 1 Score: 610.912 bits (1574), Expect = 0.000e+0
Identity = 351/922 (38.07%), Postives = 518/922 (56.18%), Query Frame = 0
Query:    1 YLKLDLTVLAEGDLVK---EAPALDDDDIDSNPLLPDGLPPE------------------LNSGMLAAVRKAFSGETRLRDLADPFVTITFAGQEASTKVIEKCYDPEWNEEITFCDLFPSLCRRIKVQLRDKDVTKIETVGTTWIDLSEISNNNANVHKYNDAINFPPTFGPTWVNLYGSTRDFSFIDKDQQLNEGMEEGIGYRGRILMYIKTTEGESASNDEICN---INVKAAFPISDLAPGKEETFQLFCCIYEASMIHKANADKPCRFEMNIGNYGNTIDGKMISFKDDDDDNDDEEXTIDGKMISFKDDDDDNDDEE----DEDPFVRPLTKEYDCESADKEYYHIPFGARKPTMGIRFPWEDHRRRCYLTNIMEKLKMKLEDELDDVRTLLSIDSQDTYLYLQDALKE-------FISYCDVISGNLSKITGAKAGVTLLDEKRRKLCEKETEVMQKQAKSILDELK-----DNKRIEKHYFKVLKILNRIDKIMIEPQNAIPDVFLWLMSGGKRKCYVRIPVNQLMYSPIEAESGKNAGRKQTYLLSLPGKAGYGEAGWAIHCKLTCLIWLGVMKNKNDMLIDAPEEF-DVIPANSRKSTAPVPTQLKYLCKHKYILRAHLYQARGLIGSDDSGLSDAFARVVFNNQAAETRIIYETRNPTWNQMLILFDLTIWGDIDPVVENPPTIMIEIFDYDPGGEIEFIGRVMARPLVKKADSPYEGPLFPPKLEWFQIYRGDLPAGEMLAAFELFQVHPEEAELAAKMKQAQDEGQIYELTPEELEENKSNIPLEEAIQEIDEYEIVYFIVPLNIQPVMEMRTIEVLFWGVRELKPISFYKTVEKPQVFVDCVGKGVASPIIESVKKNPNFEEPYNKFELMLPIEDRYCPPLTFSVKEEHMFGNEFLIGTAIVKSLLRF 881
            Y+K D+ V+ +GD +K   +A   D+DDI+ N LLP+G+PPE                  +N+ ++A V+KAF GE +  DL DP+V + FAGQ+  T V +  Y+P WNE++ F DLFP LC+R+KVQ+RD D      +GT +IDL +ISN+            F PT GP WVN+YGSTR+++ +D+ Q LNEG+ EG+ +R R+L+ +   E    SN E+ +   + V+ A PIS+   GK E F LF    EASMI + N DKP  FE+ IGNYGN +DG     +        +E  +D  +I    DD+  D  +       P +RP       +  D+ Y+H+P+  RKP + I+  W D RRR Y  NIM+ +  KLE+ L+D++ ++  +       L+  L+E       F+S  D   G+ S+        T LD +R K C +E E M +QA+ +  ++K     D  R+ +++ + L+ L        EPQ++IPD+F+W+MS  KR  Y R+P   L++S +E E+GK+  + +T  L LPGK G+G AGW +  K+   +WLG+ K + + L   P  F +V  A      A  P  L Y  K  + LRAH+YQAR L  +D SGLSD FARV F NQ+  T ++ ET  PTW+QML+  +L ++G+   + ++PP I+IEI+D D  G+ +F+GR  A+PLVK AD  Y  P FPP+LE++QIYRG+  AG++LAAFEL Q+ P                             K+++P      ++D   I+   VP+ I+PV+    +EVLFWG+R+LK ++  + V++P+V ++C GKGV S +I + KKNPNF      FE+ LP  +   PPL   V +   FG   L+G+  V SL RF
Sbjct:  372 YVKCDVAVVGKGDNIKTPHKANETDEDDIEGNLLLPEGVPPERQWARFYVKIYRAEGLPRMNTSLMANVKKAFIGENK--DLVDPYVQVFFAGQKGKTSVQKSSYEPLWNEQVVFTDLFPPLCKRMKVQIRDSDKVNDVAIGTHFIDLRKISNDGDK--------GFLPTLGPAWVNMYGSTRNYTLLDEHQDLNEGLGEGVSFRARLLLGL-AVEIVDTSNPELTSSTEVQVEQATPISESCAGKMEEFFLFGAFLEASMIDRRNGDKPITFEVTIGNYGNEVDGLSRPQRPRPRKEPGDEEEVD--LIQNASDDEAGDAGDLASVSSTPPMRP-------QVTDRNYFHLPYLERKPCIYIKSWWPDQRRRLYNANIMDHIADKLEEGLNDIQEMIKTEKSYPERRLRGVLEELSCGCCRFLSLADKDQGHSSR--------TRLDRERLKSCMRELENMGQQARMLRAQVKRHTVRDKLRLCQNFLQKLRFLAD------EPQHSIPDIFIWMMSNNKRVAYARVPSKDLLFSIVEEETGKDCAKVKTLFLKLPGKRGFGSAGWTVQAKVELYLWLGLSKQRKEFLCGLPCGFQEVKAAQGLGLHAFPPVSLVYTKKQAFQLRAHMYQARSLFAADSSGLSDPFARVFFINQSQCTEVLNETLCPTWDQMLVFDNLELYGEAHELRDDPPIIVIEIYDQDSMGKADFMGRTFAKPLVKMADEAYCPPRFPPQLEYYQIYRGNATAGDLLAAFELLQIGPA---------------------------GKADLPPINGPVDVDRGPIM--PVPMGIRPVLSKYRVEVLFWGLRDLKRVNLAQ-VDRPRVDIECAGKGVQSSLIHNYKKNPNFNTLVKWFEVDLPENELLHPPLNIRVVDCRAFGRYTLVGSHAVSSLRRF 1229          

HSP 2 Score: 562.377 bits (1448), Expect = 1.945e-166
Identity = 299/654 (45.72%), Postives = 413/654 (63.15%), Query Frame = 0
Query: 1433 IDWWSRFY---ETIKDKKRVEEAIAKKTKKIKKEREKQGKKFDLE--------------EEEQSGAFDGIEEDVMKKNLMINPKIVRIKIYNTELEDVECFSGFNDVLHSFVLLRGKSNGNDDD---DERRIFGKFKGAIKVWKHPLPDFFKNPS---LVLGSFQMLPTRDPLDVLCRVYIVRALNLTATDAGGSADPYIQLRIGKTVIKDVEGKIENNLNPTFGRKFDIQIKIPQDNMLTVSIYDMDTLSST-LIGETKIDVEDRFFSKHKATCGMHSKYHICGFNKWRDPIKPTAILRRLCKDHGLIGPTFKTQDDSKTCLIATEQERYKFHAEKYIVDESGNQKESEEPAALTALHYFHKIDTKGYALVPEHVETRKLFAPSAPGLEQGRVQLWVDLFDMDGPSPDAAVDITPRKPTAFELRVIIWNTEDVELGDINILTGQPCADIYVKGWLEGLKHQAQQTDVHGSSLTGEGNFNWRFIFPFKYHKAEDKVVIIKK-SLFT--TTEEKMPGRLVLHCYDSDALSSDDFIGDITLQLNSCLKPTKTSKECKLETALENED--RFDIFKKKTMRGWWPFILDTEDEEPKVNGKVDAELQLLTAQESEEKPAGKGRNDPDALPPPNRPDLAMEWMMNPLKAFRYFLWEQYKF 2057
            +DWWS+++   +T+K++ R +E      ++ ++    +G K  ++              + + SG+  G E    KK     PKI  +K+Y  ELE    F  F D LH+F LLRGK+ G+D+D   +E RI G+FKG++ V+K PLP+     +      G FQ +P+ DP++VL RVY+VRA +L   D  G ADPYI +R+GKT I+D E  I   LNP FG+ FDI+   P ++MLTV++YD D + +  LIGETKID+E+RF+SKH+ATCG+   Y   G+N WRDP+KP+ IL RLCKD  + GP F      K            F     I DE+G +K ++E  AL AL ++  I   G  LVPEHVETR L  P  PG+EQGR++LWVD+F MD P+P   +DI+PRKP  +ELRVIIWNT++V L D +  TG+  +DI+V+GWL+G +   Q TDVH  SLTGEGNFNWR++FPF Y  AE+K+VI KK S+F+   TE K+P RL L  +D+D  S+DDF+G I L LN   +  KT+K+C +E A    D     IFK+K ++GWWP +   E++E ++ GKV+AEL LLTA+E+E+ P G  RN+PD L  PNRPD +  W +NPLK+ RYFLW  Y++
Sbjct: 1326 LDWWSKYFASIDTMKEQLRQQEPSGIDLEEKEEVDNTEGLKGSMKGKEKARAAKEEKKKKTQSSGSGQGSEAPEKKK-----PKIDELKVYPKELESE--FDNFEDWLHTFNLLRGKT-GDDEDGSTEEERIVGRFKGSLCVYKVPLPEDVSREAGYDSTYGMFQGIPSNDPINVLVRVYVVRATDLHPADINGKADPYIAIRLGKTDIRDKENYISKQLNPVFGKSFDIEASFPMESMLTVAVYDWDLVGTDDLIGETKIDLENRFYSKHRATCGIAQTYSTHGYNIWRDPMKPSQILTRLCKDGKVDGPHFGPPGRVKVA-------NRVFTGPSEIEDENGQRKPTDEHVALLALRHWEDIPRAGCRLVPEHVETRPLLNPDKPGIEQGRLELWVDMFPMDMPAPGTPLDISPRKPKKYELRVIIWNTDEVVLEDDDFFTGEKSSDIFVRGWLKGQQEDKQDTDVHYHSLTGEGNFNWRYLFPFDYLAAEEKIVISKKESMFSWDETEYKIPARLTLQIWDADHFSADDFLGAIELDLNRFPRGAKTAKQCTMEMATGEVDVPLVSIFKQKRVKGWWPLLARNENDEFELTGKVEAELHLLTAEEAEKNPVGLARNEPDPLEKPNRPDTSFIWFLNPLKSARYFLWHTYRW 1964          
The following BLAST results are available for this feature:
BLAST of TCONS_00007371-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
OTOF1.945e-16638.07Otoferlin OS=Homo sapiens GN=OTOF PE=1 SV=3[more]
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