TCONS_00007303-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00007303-protein
Unique NameTCONS_00007303-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1588

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00007303-protein ID=TCONS_00007303-protein|Name=TCONS_00007303-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1588bp
MTIAVNCVLLALNTPLPQYDKSKLNLQLEKAEIYLLAIFIVEALLKIVTR
GFILHPGSYLRNAWNVLDFVVVVTGIMSLPYLNLDIDANALKALRAGRVL
RPLKLVSGIPSLQVVMKSIMRAMAPLLQICLLVIFVIIIYSIIGLEFLNG
SFHYSCRDNNSALMDGEHQLCSPEGLGYQCPPGYECKRYWDGPNKGITSF
DNMLLSMLTVFTCITCEGWTDTMYWTFDVADKNGYIFWIYYFSLNIIGAQ
FMLNLVLGVLSGEFGKERERVENRTAFLLLRQGQQVDRALTGYMDWIDTA
EKAIIEEEDEEDEEHTQFRSSRTKGNTGNLGMTKVLTKNAAGKNFRLNIH
GKEKKKPWKEIFRKKNRRMKIRIKKVVEHAVFYWLVITCVFLNTISVAAE
YYLQPQWLTDLQDIAEIIFLSFFLMEMCLKLYGLGPRLYFRSKFNKFDSL
VVTAGVFELILYKKYGISMGISVLRALRLLRLFKFTRYWKSLKNLITSLL
SSMKSIISLLFLLFLFILIYALLGMQLFGGSFAKTIPQPRTNFDDFGNAM
LAVFQILTGEDWNMVMYEGVTAYHGPKTPKGLAIAFIYFVTLVILGNYTL
LNVFLAIAVDNLTNAQEIGDDEKAEEREREKHKQEIKEKYAPKAGAGRNL
DVYYKDSGMNGSTISEFDRIPNDGGRSQPGHDWVKNLKQPGRMTGNIRGG
EGTEMIQTNTLFIFSPQNPIRQRIHNFVASKYFDNTILILILISSGFLAL
ENTIDKDATINKVLWKFDYVFTSIFALEVILKVVDSGVILHKGSYFRDVW
NCTDALVVCCAIASMVLSSSKSSSSSQQVVKVLRVLRVLRPFKAINKTKK
LKAVFQCMVYSLKNVINILVITIQFLFIFAVIGVQLFAGKFYYCTDESKM
HRDECYGYYITFKDSNYNQPRQEPREWKNQVFNFDNVKNALVTLFTSSTG
EGWPNVMFNAIDSTDINKGPILNNQIEVAFFFALFVVVFSFFFINIFVAL
IILTFQEQGEAEEGDCELDRNQRGCLRDAMEKKPAERFMPENPNSFQYKV
WQFVDSVPFEYFIMLLIGGNTLILMLKYDSQPEAYGKYLDVVNVIFTFLF
TGEFMLKVFALRQNYFRDGWNVFDFIIVLGSLLDFIFSKTFTTQKIPFDP
SVFRLFRAARLIKLLRRGYTIRILLWTFLQSFKSLPYVGMLIFLIFFIYA
IIGMQLFSLIAIDIEDEPWMYIDRHNNFRGFFPAFQVLFRSATGENWHNI
MLACSADARCDPKLPAVDPGQEYCGSSLAHAYFISFIFVCSFLMLNLFVA
VIMDNFGYLTQDESILGPHHLDEFVRVWALFDPRATGRIKHTEVCLLLRQ
MSPPIGLGTKCPKVVAYKRLIRMNMPLHPDNTVDFTATLFALVRTALNIM
TEKNNLHSNDVDLRNMLKRVWPNITKKTLDRVVPKRPQGGNQMTVGKIYC
AKLIYENYKHVKKSGRKNKMNLSNGNSVRKETIDDVQQPPPPRKKSVPTN
DFLGVNGSANYNLSTPNLTNFYEPQLISSPHRLSQSTYSINNDLAYDNNP
QIPRATTNKQQIALAIKSGKSPYEIYGLPDNNEDDDWC
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_004099XLOC_004099Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00007303TCONS_00007303Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002077VDCCAlpha1
IPR014873VDCC_a1su_IQ
IPR031649GPHH_dom
IPR005821Ion_trans_dom
Vocabulary: Cellular Component
TermDefinition
GO:0005891voltage-gated calcium channel complex
GO:0016020membrane
Vocabulary: Biological Process
TermDefinition
GO:0070588calcium ion transmembrane transport
GO:0055085transmembrane transport
GO:0006811ion transport
Vocabulary: Molecular Function
TermDefinition
GO:0005245voltage-gated calcium channel activity
GO:0005216ion channel activity
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0070588 calcium ion transmembrane transport
biological_process GO:0006811 ion transport
biological_process GO:0055085 transmembrane transport
cellular_component GO:0016020 membrane
cellular_component GO:0005891 voltage-gated calcium channel complex
molecular_function GO:0005216 ion channel activity
molecular_function GO:0005245 voltage-gated calcium channel activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 615..635
NoneNo IPR availableGENE3D1.10.287.70coord: 378..616
e-value: 1.0E-52
score: 178.3
coord: 1055..1311
e-value: 1.7E-55
score: 187.3
coord: 729..1008
e-value: 1.9E-51
score: 174.0
coord: 1..266
e-value: 9.0E-49
score: 165.3
NoneNo IPR availableGENE3D1.10.238.10coord: 1318..1412
e-value: 3.8E-11
score: 42.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1465..1500
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 620..639
NoneNo IPR availableSUPERFAMILY81324Voltage-gated potassium channelscoord: 2..151
coord: 196..267
NoneNo IPR availableSUPERFAMILY81324Voltage-gated potassium channelscoord: 930..1008
coord: 730..890
NoneNo IPR availableSUPERFAMILY81324Voltage-gated potassium channelscoord: 1058..1306
NoneNo IPR availableSUPERFAMILY81324Voltage-gated potassium channelscoord: 379..613
IPR002077Voltage-dependent calcium channel, alpha-1 subunitPRINTSPR00167CACHANNELcoord: 1226..1238
score: 49.88
coord: 541..567
score: 69.5
coord: 113..128
score: 67.48
coord: 1003..1023
score: 62.8
coord: 1174..1188
score: 77.5
coord: 261..285
score: 62.44
IPR014873Voltage-dependent calcium channel, alpha-1 subunit, IQ domainSMARTSM01062Ca_chan_IQ_2coord: 1440..1476
e-value: 1.1E-5
score: 34.8
IPR014873Voltage-dependent calcium channel, alpha-1 subunit, IQ domainPFAMPF08763Ca_chan_IQcoord: 1386..1463
e-value: 8.5E-24
score: 83.5
IPR031649Voltage-dependent L-type calcium channel, IQ-associated domainPFAMPF16905GPHHcoord: 1315..1385
e-value: 3.3E-33
score: 113.2
IPR005821Ion transport domainPFAMPF00520Ion_transcoord: 731..1012
e-value: 3.1E-57
score: 193.5
coord: 1059..1313
e-value: 2.5E-55
score: 187.3
coord: 2..271
e-value: 4.1E-57
score: 193.1
coord: 379..617
e-value: 1.3E-54
score: 184.9

Blast
BLAST of TCONS_00007303-protein vs. Swiss-Prot (Human)
Match: CAC1S (Voltage-dependent L-type calcium channel subunit alpha-1S OS=Homo sapiens GN=CACNA1S PE=1 SV=4)

HSP 1 Score: 1249.19 bits (3231), Expect = 0.000e+0
Identity = 707/1520 (46.51%), Postives = 962/1520 (63.29%), Query Frame = 0
Query:    1 MTIAVNCVLLALNTPLPQYDKSKLNLQLEKAEIYLLAIFIVEALLKIVTRGFILHPGSYLRNAWNVLDFVVVVTGIMS--LPYLNLDIDANA----------LKALRAGRVLRPLKLVSGIPSLQVVMKSIMRAMAPLLQICLLVIFVIIIYSIIGLEFLNGSFHYSC----RDNNSALMDGEHQLCSPEGLGYQCP-PGYECKRYWDGPNKGITSFDNMLLSMLTVFTCITCEGWTDTMYWTFDVADKNGYIFWIYYFSLNIIGAQFMLNLVLGVLSGEFGKERERVENRTAFLLLRQGQQVDRALTGYMDWIDTAEKAIIEEEDEEDEEHTQFRSSRTKGNTGNLGMTKVLTKNAAGKNFRLNIHGKEKKKPWKEIFRKKNRRMKIRIKKVVEHAVFYWLVITCVFLNTISVAAEYYLQPQWLTDLQDIAEIIFLSFFLMEMCLKLYGLGPRLYFRSKFNKFDSLVVTAGVFELILYKKYGIS-MGISVLRALRLLRLFKFTRYWKSLKNLITSLLSSMKSIISLLFLLFLFILIYALLGMQLFGGSFA-KTIPQPRTNFDDFGNAMLAVFQILTGEDWNMVMYEGVTAYHGPKTPKGLAIAFIYFVTLVILGNYTLLNVFLAIAVDNLTNAQEI--GDDEKAEEREREKHKQEIKEKYAP-KAGAGRNLDVYYKDSGMNGST---ISEFDRIPNDGGRSQPGHDWVKN---------LKQPGRMTGNIRGGE-GTEMIQTNTLFIFSPQNPIRQRIHNFVASKYFDNTILILILISSGFLALENTIDKDATINKVLWKFDYVFTSIFALEVILKVVDSGVILHKGSYFRDVWNCTDALVVCCAIASMVLSSSKSSSSSQQVVKVLRVLRVLRPFKAINKTKKLKAVFQCMVYSLKNVINILVITIQFLFIFAVIGVQLFAGKFYYCTDESKMHRDECYGYYITFKDSNYNQPRQEPREWKNQVFNFDNVKNALVTLFTSSTGEGWPNVMFNAIDSTDINKGPILNNQIEVAFFFALFVVVFSFFFINIFVALIILTFQEQGEAEEGDCELDRNQRGCLRDAMEKKPAERFMPENPNSFQYKVWQFVDSVPFEYFIMLLIGGNTLILMLKYDSQPEAYGKYLDVVNVIFTFLFTGEFMLKVFALR-QNYFRDGWNVFDFIIVLGSLLDFIFSK--TFTTQKIP----------FDP--------SVFRLFRAARLIKLLRRGYTIRILLWTFLQSFKSLPYVGMLIFLIFFIYAIIGMQLFSLIAIDIEDEPWMYIDRHNNFRGFFPAFQVLFRSATGENWHNIMLACSADARCDPKLPAVDPGQEY-CGSSLAHAYFISFIFVCSFLMLNLFVAVIMDNFGYLTQDESILGPHHLDEFVRVWALFDPRATGRIKHTEVCLLLRQMSPPIGLGTKCPKVVAYKRLIRMNMPLHPDNTVDFTATLFALVRTALNIMTEKNNLHSNDVDLRNMLKRVWPNITKKTLDRVVPKRPQGGNQMTVGKIYCAKLIYENYKHVKK 1463
            +TI  NCV LA+  P+P+ D + LNL LEK E + L +F +EA +KI+  GF+ H  +YLR+ WNVLDF +V  G+ +  L  +N+     A          +KALRA RVLRPL+LVSG+PSLQVV+ SI +AM PL  I LLV+F++IIY+IIGLE   G  H +C     D  + + + E   C+  G G +C   G EC+  W GPN GIT FDN   SMLTV+ CIT EGWTD +YW  D A  N +  WIY+ +L ++G+ F+LNLVLGVLSGEF KERE+ ++R  F  LR+ QQ+D  L GYM WI   E  +++ ED        FR  +   + G      +       K  +   H ++    W  IFR K          +V+  VFYWLVI  V LNT+S+A+E++ QP WLT LQDIA  + LS F  EM +K+YGLG R YF S FN+FD  VV +G+ E++L +   ++ +GISVLR +RLLR+FK T+YW SL NL+ SLL+S++SI SLL LLFLFI+I+ALLGMQLFGG +  +     R+NFD+F  A+++VFQ+LTGEDW  +MY G+ AY GP  P  L    IYF+ L + GNY LLNVFLAIAVDNL  A+ +      KAEE++R K  + + +K    K+   + L+   K  G+  +    I EF+   N+     P  D+  +         L    R    ++  E    + + ++ FIFSP N IR   H  V + +F N IL+ IL+SS  LA E+ I  D+  N++L  FD  FTS+F +E++LK+   G  LHKGS+ R+ +N  D LVV  ++ SM L SS  S     VVK+LRVLRVLRP +AIN+ K LK V QCM  ++  + NI+++T    F+FA IGVQLF GKF+ CTD SKM  +EC GYY  +KD +  Q     REW +  F+FDNV +A+++LFT ST EGWP +++ AIDS   + GPI NN++E+A FF +++++ +FF +NIFV  +I+TFQEQGE E  +CELD+NQR C++ A++ +P   ++P+NP  +QY+VW  V S  FEY +  LI  NT+ L +++ +Q E      D++NV FT +FT E +LK+ A + + YF D WNVFDF+IV+GS++D I S+  TF                 DP        + FRLFR  RLIKLL R   +R LLWTF++SF++LPYV +LI ++FFIYA+IGMQ+F  IA+    +    I+R+NNF+ F  A  +LFR ATGE W  I+LACS    CDP+     PG+EY CG++ A+ YFISF  +C+FL++NLFVAVIMDNF YLT+D SILGPHHLDEF  +WA +DP A GRIKH +V  LLR++ PP+G G  CP  VA KRL+ MNMPL+ D TV F ATLFALVRTAL I TE N   +N+ +LR ++K++W   + K LD+V+P  P G +++TVGK Y   LI E+++   K
Sbjct:   59 LTIFANCVALAVYLPMPEDDNNSLNLGLEKLEYFFLIVFSIEAAMKIIAYGFLFHQDAYLRSGWNVLDFTIVFLGVFTVILEQVNVIQSHTAPMSSKGAGLDVKALRAFRVLRPLRLVSGVPSLQVVLNSIFKAMLPLFHIALLVLFMVIIYAIIGLELFKGKMHKTCYFIGTDIVATVENEEPSPCARTGSGRRCTINGSECRGGWPGPNHGITHFDNFGFSMLTVYQCITMEGWTDVLYWVND-AIGNEWP-WIYFVTLILLGSFFILNLVLGVLSGEFTKEREKAKSRGTFQKLREKQQLDEDLRGYMSWITQGE--VMDVED--------FREGKLSLDEGGSDTESLYEIAGLNKIIQFIRHWRQ----WNRIFRWK-------CHDIVKSKVFYWLVILIVALNTLSIASEHHNQPLWLTRLQDIANRVLLSLFTTEMLMKMYGLGLRQYFMSIFNRFDCFVVCSGILEILLVESGAMTPLGISVLRCIRLLRIFKITKYWTSLSNLVASLLNSIRSIASLLLLLFLFIVIFALLGMQLFGGRYDFEDTEVRRSNFDNFPQALISVFQVLTGEDWTSMMYNGIMAYGGPSYPGMLVC--IYFIILFVCGNYILLNVFLAIAVDNLAEAESLTSAQKAKAEEKKRRKMSKGLPDKSEEEKSTMAKKLEQKPKGEGIPTTAKLKIDEFESNVNEVKDPYPSADFPGDDEEDEPEIPLSPRPRPLAELQLKEKAVPIPEASSFFIFSPTNKIRVLCHRIVNATWFTNFILLFILLSSAALAAEDPIRADSMRNQILKHFDIGFTSVFTVEIVLKMTTYGAFLHKGSFCRNYFNMLDLLVVAVSLISMGLESSAIS-----VVKILRVLRVLRPLRAINRAKGLKHVVQCMFVAISTIGNIVLVTTLLQFMFACIGVQLFKGKFFRCTDLSKMTEEECRGYYYVYKDGDPMQIELRHREWVHSDFHFDNVLSAMMSLFTVSTFEGWPQLLYKAIDSNAEDVGPIYNNRVEMAIFFIIYIILIAFFMMNIFVGFVIVTFQEQGETEYKNCELDKNQRQCVQYALKARPLRCYIPKNP--YQYQVWYIVTSSYFEYLMFALIMLNTICLGMQHYNQSEQMNHISDILNVAFTIIFTLEMILKLMAFKARGYFGDPWNVFDFLIVIGSIIDVILSEIDTFLASSGGLYCLGGGCGNVDPDESARISSAFFRLFRVMRLIKLLSRAEGVRTLLWTFIKSFQALPYVALLIVMLFFIYAVIGMQMFGKIALVDGTQ----INRNNNFQTFPQAVLLLFRCATGEAWQEILLACSYGKLCDPE-SDYAPGEEYTCGTNFAYYYFISFYMLCAFLVINLFVAVIMDNFDYLTRDWSILGPHHLDEFKAIWAEYDPEAKGRIKHLDVVTLLRRIQPPLGFGKFCPHRVACKRLVGMNMPLNSDGTVTFNATLFALVRTALKIKTEGNFEQANE-ELRAIIKKIWKRTSMKLLDQVIP--PIGDDEVTVGKFYATFLIQEHFRKFMK 1538          
The following BLAST results are available for this feature:
BLAST of TCONS_00007303-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CAC1S0.000e+046.51Voltage-dependent L-type calcium channel subunit a... [more]
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