TCONS_00007263-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00007263-protein
Unique NameTCONS_00007263-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length268

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00007263-protein ID=TCONS_00007263-protein|Name=TCONS_00007263-protein|organism=Clytia hemisphaerica|type=polypeptide|length=268bp
HLGNQMKTMHNIRLVSRDILDYCHCKTSFIGGNMVPQPQRLQTSMSLYSE
NLSAMVFLVDDRLNASMGLKKKFENIVQETTDFHFPSFEQQRCLIEQTLS
QQRSRARTLRTSSLSRSKQNETTNKLLQTGDFYLTKHSNLAEVHAVFHLV
TDDNLSAMTINSRHPIMIGVRNIMLAASRYNITNLAIPLLLVHEMGENLT
MQWCMKRAELVFKCVKGFMMESLSWDGDDAKTVQFVVPPGISEDMFIALS
NMLPSVFRVSTTLDLSKR
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_004080XLOC_004080Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00007263TCONS_00007263Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019311DUF2362
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019311Protein of unknown function DUF2362PFAMPF10154DUF2362coord: 1..262
e-value: 1.5E-113
score: 380.3
NoneNo IPR availableGENE3D3.40.220.10coord: 85..257
e-value: 1.3E-4
score: 20.7

Blast
[Close]
BLAST of TCONS_00007263-protein vs. Swiss-Prot (Human)
Match: CL004 (Protein C12orf4 OS=Homo sapiens GN=C12orf4 PE=2 SV=1)

HSP 1 Score: 276.944 bits (707), Expect = 4.382e-90
Identity = 131/278 (47.12%), Postives = 188/278 (67.63%), Query Frame = 0 
Query:    1 HLGNQMKTMHNIRLVSRDILDYCHCKTSFIGGNMVPQPQRLQTSMSLYSENLSAMVFLVDDRLNASMGLKKKFENIVQETTDFHFPSFEQQRCLIEQTLSQQRSRARTLRTSSLSRSKQNETTNKLLQT----------GDFYLTKHSNLAEVHAVFHLVTDDNLSAMTINSRHPIMIGVRNIMLAASRYNITNLAIPLLLVHEMGENLTMQWCMKRAELVFKCVKGFMMESLSWDGDDAKTVQFVVPPGISEDMFIALSNMLPSVFRVSTTLDLSKR 268
            HLG Q+KTMHN+RL+  D+LD+C  K +   G  +    RLQT++SLYS +L  +V LVD+R+N+  G+K+ F  + QE TDFHFP  E+Q  +++Q +   R++ R+    SL    QN   +   +           G+FY+T+HSNL+E+H  FHL  DD++ +  I +R P ++G+RNI+     ++IT ++IPLLLVH+M E +T+ WC++RAELVFKCVKGFMME  SWDG  ++TVQF+VP  ISE+MF  LSNMLP +FRVS+TL L+ +
Sbjct:  277 HLGAQLKTMHNLRLLRADMLDFCKHKRNHRSGVKL---HRLQTALSLYSTSLCGLVLLVDNRINSYSGIKRDFATVCQECTDFHFPRIEEQLEVVQQVVLYARTQRRSKLKESLDSGNQNGGNDDKTKNAERNYLNVLPGEFYITRHSNLSEIHVAFHLCVDDHVKSGNITARDPAIMGLRNILKVCCTHDITTISIPLLLVHDMSEEMTIPWCLRRAELVFKCVKGFMMEMASWDGGISRTVQFLVPQSISEEMFYQLSNMLPQIFRVSSTLTLTSK 551
The following BLAST results are available for this feature:
BLAST of TCONS_00007263-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CL0044.382e-9047.12Protein C12orf4 OS=Homo sapiens GN=C12orf4 PE=2 SV... [more]
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