TCONS_00007208-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00007208-protein
Unique NameTCONS_00007208-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length540

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00007208-protein ID=TCONS_00007208-protein|Name=TCONS_00007208-protein|organism=Clytia hemisphaerica|type=polypeptide|length=540bp
MMLEFVEFLSSSDDEEEHEMDECDWTRTNQSKGETATNEAIEEHTDSDDN
IETPQSKTKAVSTKSKPANTQANREQQQKKKETIALIKQLATHIITMEKE
KKSQLYAKKKKSDEQPFKSLEEMENKYNSQRKIERETLKDNLSKTGIKLE
RFKRDKLPAQKSPANLEKLKILMEEIEADIMQMKEKQKLIYEDLMMEEKS
LSIEIESCNKKFDNWSNKTLPIPQSAIKKKNEEGKDERLPEEVILFEKFV
QVTNGHQGGWDDIDHQLFVKLQKQYKKPSQFMEKALESIPTHTENEIKQH
VEWYQQYTVLNEKKREAIRKWKKNKTNRKDDMLSNSDTTLGEREEMEKKK
KRDEMFERERQERILQLQKWKAMKTEEEEMKRNNEEILKDERENLKIQKL
MEEKRRLETKIQIQEYKLKRREEEDIMQQIREDEERQKRKQLSTLEKERI
RERNERIMDQKKTKQLSAQVAEEEKEERLRKLKGRINIHVERDPNRLLKP
TEGWKRRQNDTENNRTKADHMIGTRGLPHRAVPSWRQGIP
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_004040XLOC_004040Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00007208TCONS_00007208Clytia hemisphaericatranscript
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 166..186
NoneNo IPR availableCOILSCoilCoilcoord: 373..455
NoneNo IPR availableCOILSCoilCoilcoord: 472..492
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 327..357
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 491..540
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..81

Blast
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BLAST of TCONS_00007208-protein vs. Swiss-Prot (Human)
Match: CC112 (Coiled-coil domain-containing protein 112 OS=Homo sapiens GN=CCDC112 PE=1 SV=2)

HSP 1 Score: 215.312 bits (547), Expect = 5.569e-64
Identity = 164/466 (35.19%), Postives = 267/466 (57.30%), Query Frame = 0 
Query:   97 MEKEKKSQLYAKKKKSDEQPFKS-LEEMENKYNSQRKIERETLKDNLSKTGIKLERFKRDKLPAQKSPANLEKLKILMEEIEADIMQMKEKQKLIYEDLMMEEKSLSIEIESCNKKFDNWS--NKTLPIPQSAIKKKNEEGK--DERLPEEVILFEKFVQVTNGHQGGWDDIDHQLFVKLQKQYKKPSQFMEKALESIPTHTENEIKQHVEWYQQYTVLNEKKREAIRKWKKNKTNRKDDML------SNSDTTLGEREEMEKKKKRDEMFERERQERILQLQKWKAMKTEEEEMKRNNEEILKDERENLKIQKLMEEKRRLETKIQIQEYKLKRREEEDIM---QQIREDEERQKRKQLSTLEKERIRERNERIMDQKKTKQLSAQVAEEEKEE---RLRKLKGRINIHVERDPNRLLKPTEGWKRRQNDTENNRTKADHMIGTRG------LPHRAVPSWRQGI 539
            MEK+K S  Y   +KSD +   S LEE+ENK    RK ER  ++  L+K    +++ +      + +P  +EKL+ +MEEIE  I   KE+Q+LIYE+L+ EEK+ + E+ + ++K D W+  N        AI  K    K     LPEEV+ FEKF+Q T G QG WDD DHQ FVK++ ++K    FME+ LE +P  T++E++QH +WYQ++  L E+K+E+I+ WK  K  +++++        N+      ++E  +K+K     E +R+++ L ++ WK  K+ E  MK  ++     E E  + +   E +R+ + K+ ++ Y  +++E+E+ +   ++IRE  E+ ++++ +  E  R +ER+   + + + K L  Q  E+EK +   RL KLK ++  +V RDP+RL KPT+GW+         RTK    IG  G      +PHRA+P+WRQGI
Sbjct:    1 MEKDKHSHFY--NQKSDFRIEHSMLEELENKLIHSRKTERAKIQQQLAKIHNNVKKLQHQLKDVKPTPDFVEKLREMMEEIENAINTFKEEQRLIYEELIKEEKTTNNELSAISRKIDTWALGNSETEKAFRAISSKVPVDKVTPSTLPEEVLDFEKFLQQTGGRQGAWDDYDHQNFVKVRNKHKGKPTFMEEVLEHLPGKTQDEVQQHEKWYQKFLALEERKKESIQIWKTKKQQKREEIFKLKEKADNTPVLFHNKQEDNQKQK-----EEQRKKQKLAVEAWKKQKSIEMSMKCASQ---LKEEEEKEKKHQKERQRQFKLKLLLESYTQQKKEQEEFLRLEKEIREKAEKAEKRKNAADEISRFQERD---LHKLELKILDRQAKEDEKSQKQRRLAKLKEKVENNVSRDPSRLYKPTKGWE--------ERTKK---IGPTGSGPLLHIPHRAIPTWRQGI 442
The following BLAST results are available for this feature:
BLAST of TCONS_00007208-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CC1125.569e-6435.19Coiled-coil domain-containing protein 112 OS=Homo ... [more]
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