TCONS_00007203-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00007203-protein
Unique NameTCONS_00007203-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1116

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00007203-protein ID=TCONS_00007203-protein|Name=TCONS_00007203-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1116bp
MRAESLDLISLMQKNAANIRNICILAHVDHGKTTLADSLIASNGIISSRL
AGKLRYMDSREDEQQRGITMKSSAISLYHMKDKQNYLVNLIDSPGHIDFS
SEVSTAVRLCDGAIVIVDVVEGVCPQTNAVLRQAWLEGIKPCLVLNKMDR
LITELKLTPLEAFYHLQKVLEQVNAITGSLFSTKIMEESSKDQQTDIDQT
EDQSDVFDWSSGLDDADDENLYFSPESGNVVFASAIDGWAFGIDTFADLY
SAKLGISKRILVKTLWGDYFLNMKAKKILKGAYTKGKKPLFVQFILDNLW
ILYEAVLNRDKPKITKIVESLNVKITSVKFSEPKVHLQAILRQWLPLSSS
ILDLVCSYLPSPLEMREDRVKKLMCSGFKKFESYPDDTQKLKDDFLKCSS
REDAPVIVFVSKMISVDAASLPEKRRRPLTKEEMAEKYEAAKQRHAEKNI
QRQEGEEGDNTEQNKPDEETEEKQDDEEHEKEHFVAFARVFSGTLKKGMK
LYVLGPKYDPSLKIVEKSHTEVPATSSKSQHQFDSQQLVSSNGAVLCEIK
DLYLMMGKEFEALDEVPAGNMIGINGFSDSILKSGTASTSLACPPFTSMT
FEAKPIVRVAVEPRQPSQLQQLVRGMRLLNQADPCVEVMVQESGEYVIVA
AGEVHLQRCLDDLTERFAKIKIRASDPIVPFRESVVNPPKIDMVNEEISE
INKSMAHHTQRLPAFMLKEIQSFSDLIHKHGEETAVQGGPDESSDVILSK
NQVIEAKKSAKMKEKTGLIEAFTANKQYCMCLQAKPLSSDIVDFLDKNFE
LLKIIQKLSTEPNIEDRKIAIKELTTEIRASIKNLYNQLDTLFENSGKDW
RKAIDRIWAVGPKGSFTNILFNNVPDYNRSNIWFGLLDDNQNDEENDLRM
REYDNSIVSGFQLAVQSGPMCEEPMRGVAFMVSDWSIQEKQTAEESSIKH
GPLSGQHISSFREGCRRAVMAQPMRLMAAMYTCEIQATTEVLGKVYSVIN
KRLGKILSEDLKEGSDIFDIHAELPVAESFGFAEEIRKKTSGLASPQLIF
NRWQVLDEDPFWIPTTEEEYELYGEKADSENQALKYVNKVRHRKGLYVEK
KTVEHAEKQRTLKRNK
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_004039XLOC_004039Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00007203TCONS_00007203Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000795TF_GTP-bd_dom
IPR000640EFG_V
IPR004161EFTu-like_2
IPR009022EFG_III-V
IPR005225Small_GTP-bd_dom
IPR014721Ribosomal_S5_D2-typ_fold_subgr
IPR020568Ribosomal_S5_D2-typ_fold
IPR027417P-loop_NTPase
IPR009000Transl_B-barrel
Vocabulary: Molecular Function
TermDefinition
GO:0003924GTPase activity
GO:0005525GTP binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003924 GTPase activity
molecular_function GO:0005525 GTP binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 431..451
NoneNo IPR availableGENE3D3.30.70.870coord: 597..702
e-value: 3.4E-17
score: 61.9
NoneNo IPR availableGENE3D3.90.1430.10coord: 247..345
e-value: 1.6E-27
score: 95.3
NoneNo IPR availableGENE3D3.30.70.240coord: 970..1096
e-value: 7.9E-42
score: 141.7
NoneNo IPR availablePFAMPF00009GTP_EFTUcoord: 18..251
e-value: 1.1E-60
score: 204.4
NoneNo IPR availableGENE3D2.40.30.10coord: 362..596
e-value: 1.3E-33
score: 115.2
NoneNo IPR availableGENE3D3.40.50.300coord: 14..246
e-value: 5.9E-35
score: 119.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 436..480
NoneNo IPR availableCDDcd01885EF2coord: 20..251
e-value: 1.40483E-120
score: 371.179
NoneNo IPR availableCDDcd01681aeEF2_snRNP_like_IVcoord: 766..982
e-value: 2.23351E-33
score: 127.301
NoneNo IPR availableCDDcd04096eEF2_snRNP_like_Ccoord: 979..1057
e-value: 9.00485E-37
score: 133.82
NoneNo IPR availableCDDcd03700eEF2_snRNP_like_IIcoord: 480..590
e-value: 5.00708E-24
score: 97.6335
IPR000795Transcription factor, GTP-binding domainPRINTSPR00315ELONGATNFCTcoord: 65..73
score: 48.93
coord: 141..150
score: 40.0
coord: 21..34
score: 63.09
coord: 89..99
score: 60.44
coord: 105..116
score: 37.02
IPR000795Transcription factor, GTP-binding domainPROSITEPS51722G_TR_2coord: 17..258
score: 54.924
IPR000640Translation elongation factor EFG, V domainSMARTSM00838EFG_C_acoord: 975..1064
e-value: 3.4E-9
score: 46.6
IPR000640Translation elongation factor EFG, V domainPFAMPF00679EFG_Ccoord: 976..1060
e-value: 3.5E-15
score: 55.7
IPR004161Translation elongation factor EFTu-like, domain 2PFAMPF03144GTP_EFTU_D2coord: 484..586
e-value: 3.9E-10
score: 39.9
IPR009022Elongation factor G, III-V domainPFAMPF14492EFG_IIcoord: 604..667
e-value: 5.9E-7
score: 29.4
IPR009022Elongation factor G, III-V domainSUPERFAMILY54980EF-G C-terminal domain-likecoord: 980..1092
IPR009022Elongation factor G, III-V domainSUPERFAMILY54980EF-G C-terminal domain-likecoord: 603..677
IPR005225Small GTP-binding protein domainTIGRFAMTIGR00231TIGR00231coord: 19..172
e-value: 1.6E-18
score: 65.0
IPR014721Ribosomal protein S5 domain 2-type fold, subgroupGENE3D3.30.230.10coord: 762..969
e-value: 1.1E-41
score: 141.9
IPR020568Ribosomal protein S5 domain 2-type foldSUPERFAMILY54211Ribosomal protein S5 domain 2-likecoord: 834..977
coord: 764..803
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 11..181
coord: 215..360
IPR009000Translation protein, beta-barrel domainSUPERFAMILY50447Translation proteinscoord: 480..510
coord: 541..599
coord: 362..417

Blast
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BLAST of TCONS_00007203-protein vs. Swiss-Prot (Human)
Match: EFL1 (Elongation factor-like GTPase 1 OS=Homo sapiens GN=EFL1 PE=1 SV=2)

HSP 1 Score: 1158.67 bits (2996), Expect = 0.000e+0
Identity = 604/1182 (51.10%), Postives = 795/1182 (67.26%), Query Frame = 0 
Query:    1 MRAESLDLISLMQKNAANIRNICILAHVDHGKTTLADSLIASNGIISSRLAGKLRYMDSREDEQQRGITMKSSAISLYHMKDKQNYLVNLIDSPGHIDFSSEVSTAVRLCDGAIVIVDVVEGVCPQTNAVLRQAWLEGIKPCLVLNKMDRLITELKLTPLEAFYHLQKVLEQVNAITGSLFSTKIMEE-SSKDQQTDIDQTEDQSD-VFDWSSGLDDADDENLYFSPESGNVVFASAIDGWAFGIDTFADLYSAKLGISKRILVKTLWGDYFLNMKAKKILKGAYTKGKKPLFVQFILDNLWILYEAVLNRDKPKITKIVESLNVKITS--VKFSEPKVHLQAILRQWLPLSSSILDLVCSYLPSPLEMREDRVKKLMCSGFKKFESYPDDTQKLKDDFLKCSSREDAPVIVFVSKMISVDAASLPEKRRRPLTKEEMAEKYEAAKQRHAEKNIQRQ------------------EGEEGDNTEQNKPDEETEEKQDDEEHEKEHFVAFARVFSGTLKKGMKLYVLGPKYDP--SLKIVEKSHTEVPATSSKSQHQFDSQQLVSSNGAVLCEIKDLYLMMGKEFEALDEVPAGNMIGINGFSDSILKSGTASTSLACPPFTSMTFEAKPIVRVAVEPRQPSQLQQLVRGMRLLNQADPCVEVMVQESGEYVIVAAGEVHLQRCLDDLTERFAKIKIRASDPIVPFRESVVNPPKIDMVNEEISEINKSMAHHTQRLPAFMLKEIQSFSDLIHKHGEETAVQGGPDESSDVILSKNQVIEAKKSAKMKEKTGLIEAFTANKQYCMCLQAKPLSSDIVDFLDKNFELLKIIQKLSTEPNIEDRKIAIKELTTEIRASIKNLYNQLDTLFENSGKDWRKAIDRIWAVGPKGSFTNILFNNVPDYNRSNIWFGLLDDNQNDEENDLRMREYDNSIVSGFQLAVQSGPMCEEPMRGVAFMVSDWSIQ--------------------------------------EKQTAE--ESSIK--HGPLSGQHISSFREGCRRAVMAQPMRLMAAMYTCEIQATTEVLGKVYSVINKRLGKILSEDLKEGSDIFDIHAELPVAESFGFAEEIRKKTSGLASPQLIFNRWQVLDEDPFWIPTTEEEYELYGEKADSENQALKYVNKVRHRKGLYVEKKTVEHAEKQRTLKRNK 1116
            M   SLD +  +QKN ANIRNIC+LAHVDHGKTTLAD LI+SNGIISSRLAGKLRYMDSREDEQ RGITMKSSAISL++    + YL+NLIDSPGH+DFSSEVSTAVR+CDG I++VD VEGVCPQT AVLRQAWLE I+P LV+NK+DRLI ELK TP EA+ HL+ +LEQ+NA+TG+LF++K++EE + ++ ++ ++   +Q + V+DWS+GL+D DD +LYFSPE GNVVF SAIDGW FGI+ FA +YS K+GI K +L+KTLWGDY++NMKAKKI+KG   KGKKPLFVQ IL+N+W LY+AVL +DK KI KIV SL +KI +   + S+PKV + AI  QWLP+S ++L +VC  LPSPL++  +RV++LMC+G + F+S+P +TQ LK  F+KC S + APVI+FVSKM +VDA +LP+ + RPLT+EE+A++ E A+QRHAEK    Q                  +GEE    EQ + +  T +    EE+ +E F+AFARVFSG  ++G K++VLGPKY P   L+ V    +  P    +  H               C +++LYL+MG+E E L+EVP GN++GI G  D +LKS T  +  +CPPF  + FEA PIVRVAVEP+ PS++ QLV+GM+LLNQADPCV++++QE+GE+V+V AGEVHLQRCLDDL ERFAKI I  S+PI+PFRE++  PPK+DMVNEEI +  K    H        +KE QS             +  G    SD                     GLI   T NK   + ++A PL  ++   L++N +L++ +++L++  N  +    I + T E     K    Q  T     G+ WR  +D+IW+ GP+    NIL N   D+  S +W G  D    +     R R+  NSIVSGFQLA  SGPMCEEP+ GV F++  W +                                       EK+T++  ES +   +GP SGQ I++ +E CR A+  +P RLMAAMYTC+I AT +VLG+VY+V++KR G++L E++KEG+D+F I A LPVAESFGFA+EIRK+TSGLASPQL+F+ W+++  DPFW+PTTEEEY  +GEKADSENQA KY+N VR RKGLYVE+K VEHAEKQRTL +NK
Sbjct:    1 MVLNSLDKMIQLQKNTANIRNICVLAHVDHGKTTLADCLISSNGIISSRLAGKLRYMDSREDEQIRGITMKSSAISLHYATGNEEYLINLIDSPGHVDFSSEVSTAVRICDGCIIVVDAVEGVCPQTQAVLRQAWLENIRPVLVINKIDRLIVELKFTPQEAYSHLKNILEQINALTGTLFTSKVLEERAERETESQVNPNSEQGEQVYDWSTGLEDTDDSHLYFSPEQGNVVFTSAIDGWGFGIEHFARIYSQKIGIKKEVLMKTLWGDYYINMKAKKIMKGDQAKGKKPLFVQLILENIWSLYDAVLKKDKDKIDKIVTSLGLKIGAREARHSDPKVQINAICSQWLPISHAVLAMVCQKLPSPLDITAERVERLMCTGSQTFDSFPPETQALKAAFMKCGSEDTAPVIIFVSKMFAVDAKALPQNKPRPLTQEEIAQRRERARQRHAEKLAAAQGQAPLEPTQDGSAIETCPKGEEPRGDEQ-QVESMTPKPVLQEENNQESFIAFARVFSGVARRGKKIFVLGPKYSPLEFLRRVPLGFSAPPDGLPQVPHM------------AYCALENLYLLMGRELEYLEEVPPGNVLGIGGLQDFVLKSATLCSLPSCPPFIPLNFEATPIVRVAVEPKHPSEMPQLVKGMKLLNQADPCVQILIQETGEHVLVTAGEVHLQRCLDDLKERFAKIHISVSEPIIPFRETITKPPKVDMVNEEIGKQQKVAVIH-------QMKEDQS------------KIPEGIQVDSD---------------------GLITITTPNKLATLSVRAMPLPEEVTQILEENSDLIRSMEQLTSSLNEGENTHMIHQKTQEKIWEFKGKLEQHLT-----GRRWRNIVDQIWSFGPRKCGPNILVNKSEDFQNS-VWTGPADKASKEAS---RYRDLGNSIVSGFQLATLSGPMCEEPLMGVCFVLEKWDLSKFEEQGASDLAKEGQEENETCSGGNENQELQDGCSEAFEKRTSQKGESPLTDCYGPFSGQLIATMKEACRYALQVKPQRLMAAMYTCDIMATGDVLGRVYAVLSKREGRVLQEEMKEGTDMFIIKAVLPVAESFGFADEIRKRTSGLASPQLVFSHWEIIPSDPFWVPTTEEEYLHFGEKADSENQARKYMNAVRKRKGLYVEEKIVEHAEKQRTLSKNK 1120
The following BLAST results are available for this feature:
BLAST of TCONS_00007203-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
EFL10.000e+051.10Elongation factor-like GTPase 1 OS=Homo sapiens GN... [more]
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