TCONS_00007127-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00007127-protein
Unique NameTCONS_00007127-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length377

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00007127-protein ID=TCONS_00007127-protein|Name=TCONS_00007127-protein|organism=Clytia hemisphaerica|type=polypeptide|length=377bp
MFQKSFLLFLEINMNIASKLIRYSKNKNISSLIPRHASTFTYVPEAPPVA
GETKKINFFQALTDAMDIAMGSDQSALIFGEDVHFGGVFRCTMGLADKYG
KERVFNTPLCEQGIVGFGIGLATAGATAIAEVQFADYIFPAFDQIVNEAA
KYRYRSGNLFDCGSLTIRSPCGAVGHGALYHSQSPEAYFAHTPGIKVVVP
RGPSQAKGLLLASIRDKNPVVFLEPKILYRQAVEEVPTGDYELPLSKAEV
VVPGSDVTIIAWGTQVQVVREVGQMAKEKFGVNCEIIDLRTILPWDEETV
IDSVLKTGRLIIAHEAPLTGGFAGEIASTIQEKCFLNLEAPIQRVCGIDT
PFPHVFEPFYLPDKFKCLEAVRKVIEF
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_003995XLOC_003995Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00007127TCONS_00007127Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005475Transketolase-like_Pyr-bd
IPR033248Transketolase_C
IPR009014Transketo_C/PFOR_II
IPR029061THDP-binding
Vocabulary: Biological Process
TermDefinition
GO:0008152metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008152 metabolic process
molecular_function GO:0003824 catalytic activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005475Transketolase-like, pyrimidine-binding domainSMARTSM00861Transket_pyr_3coord: 56..231
e-value: 6.8E-60
score: 215.0
IPR005475Transketolase-like, pyrimidine-binding domainPFAMPF02779Transket_pyrcoord: 55..230
e-value: 1.1E-42
score: 145.7
IPR033248Transketolase, C-terminal domainPFAMPF02780Transketolase_Ccoord: 247..364
e-value: 2.0E-33
score: 114.8
IPR009014Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain IIGENE3D3.40.50.920coord: 249..373
e-value: 6.6E-29
score: 99.9
IPR009014Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain IISUPERFAMILY52922TK C-terminal domain-likecoord: 240..376
NoneNo IPR availableGENE3D3.40.50.970coord: 52..248
e-value: 1.7E-70
score: 235.8
NoneNo IPR availableCDDcd07036TPP_PYR_E1-PDHc-beta_likecoord: 60..226
e-value: 8.62088E-90
score: 269.348
IPR029061Thiamin diphosphate-binding foldSUPERFAMILY52518Thiamin diphosphate-binding fold (THDP-binding)coord: 46..236

Blast
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BLAST of TCONS_00007127-protein vs. Swiss-Prot (Human)
Match: ODBB (2-oxoisovalerate dehydrogenase subunit beta, mitochondrial OS=Homo sapiens GN=BCKDHB PE=1 SV=2)

HSP 1 Score: 541.191 bits (1393), Expect = 0.000e+0
Identity = 249/344 (72.38%), Postives = 296/344 (86.05%), Query Frame = 0 
Query:   35 RHASTFTYVPEAPPVA-GETKKINFFQALTDAMDIAMGSDQSALIFGEDVHFGGVFRCTMGLADKYGKERVFNTPLCEQGIVGFGIGLATAGATAIAEVQFADYIFPAFDQIVNEAAKYRYRSGNLFDCGSLTIRSPCGAVGHGALYHSQSPEAYFAHTPGIKVVVPRGPSQAKGLLLASIRDKNPVVFLEPKILYRQAVEEVPTGDYELPLSKAEVVVPGSDVTIIAWGTQVQVVREVGQMAKEKFGVNCEIIDLRTILPWDEETVIDSVLKTGRLIIAHEAPLTGGFAGEIASTIQEKCFLNLEAPIQRVCGIDTPFPHVFEPFYLPDKFKCLEAVRKVIEF 377
            R  + FT+ P+  P   G+T+K+N FQ++T A+D ++  D +A+IFGEDV FGGVFRCT+GL DKYGK+RVFNTPLCEQGIVGFGIG+A  GATAIAE+QFADYIFPAFDQIVNEAAKYRYRSG+LF+CGSLTIRSP G VGHGALYHSQSPEA+FAH PGIKVV+PR P QAKGLLL+ I DKNP +F EPKILYR A EEVP   Y +PLS+AEV+  GSDVT++AWGTQV V+REV  MAKEK GV+CE+IDLRTI+PWD +T+  SV+KTGRL+I+HEAPLTGGFA EI+ST+QE+CFLNLEAPI RVCG DTPFPH+FEPFY+PDK+KC +A+RK+I +
Sbjct:   49 RQVAHFTFQPDPEPREYGQTQKMNLFQSVTSALDNSLAKDPTAVIFGEDVAFGGVFRCTVGLRDKYGKDRVFNTPLCEQGIVGFGIGIAVTGATAIAEIQFADYIFPAFDQIVNEAAKYRYRSGDLFNCGSLTIRSPWGCVGHGALYHSQSPEAFFAHCPGIKVVIPRSPFQAKGLLLSCIEDKNPCIFFEPKILYRAAAEEVPIEPYNIPLSQAEVIQEGSDVTLVAWGTQVHVIREVASMAKEKLGVSCEVIDLRTIIPWDVDTICKSVIKTGRLLISHEAPLTGGFASEISSTVQEECFLNLEAPISRVCGYDTPFPHIFEPFYIPDKWKCYDALRKMINY 392
The following BLAST results are available for this feature:
BLAST of TCONS_00007127-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ODBB0.000e+072.382-oxoisovalerate dehydrogenase subunit beta, mitoc... [more]
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