TCONS_00007099-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00007099-protein
Unique NameTCONS_00007099-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length238

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00007099-protein ID=TCONS_00007099-protein|Name=TCONS_00007099-protein|organism=Clytia hemisphaerica|type=polypeptide|length=238bp
MENQKSDKDDKDVLPRKFTHVIFDMDGLILDTERIYTEIYDRVAEAHGGK
YCWEIKVQLMGRPGKEGNRLAVELMNLPITPEQFYQEQQVHKEELFPQAN
VLPGADKLIRHLHKHNIPIAVASGSFHKDYLVKTTKHRELFELFPIKVFG
DDPDLKRGKPFPDQFILTSSKFADSPIPENVLVFEDSSNGVLAAKAAGMG
VVMVPDRRLDEKLYNNPTQVIFSLEDFKPELFGFPPYE
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_003967XLOC_003967Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00007099TCONS_00007099Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006439HAD-SF_hydro_IA
IPR023198PGP_dom2
IPR023214HAD-like_dom
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
Vocabulary: Biological Process
TermDefinition
GO:0008152metabolic process
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008152 metabolic process
molecular_function GO:0016787 hydrolase activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006439HAD hydrolase, subfamily IATIGRFAMTIGR01509TIGR01509coord: 81..204
e-value: 5.1E-9
score: 34.5
IPR023198Phosphoglycolate phosphatase, domain 2GENE3D1.10.150.240coord: 46..90
e-value: 1.6E-17
score: 62.9
IPR023214HAD-like domainPFAMPF13419HAD_2coord: 21..204
e-value: 1.2E-18
score: 67.7
IPR023214HAD-like domainGENE3D3.40.50.1000coord: 15..45
e-value: 0.069
score: 12.2
IPR023214HAD-like domainGENE3D3.40.50.1000coord: 91..232
e-value: 1.3E-20
score: 73.3
IPR023214HAD-like domainSUPERFAMILY56784HAD-likecoord: 17..234
NoneNo IPR availableCDDcd01427HAD_likecoord: 101..204
e-value: 1.2556E-9
score: 52.7575

Blast
[Close]
BLAST of TCONS_00007099-protein vs. Swiss-Prot (Human)
Match: HDHD1 (Pseudouridine-5'-phosphatase OS=Homo sapiens GN=PUDP PE=1 SV=3)

HSP 1 Score: 223.787 bits (569), Expect = 6.508e-74
Identity = 104/224 (46.43%), Postives = 150/224 (66.96%), Query Frame = 0 
Query:   15 PRKFTHVIFDMDGLILDTERIYTEIYDRVAEAHGGKYCWEIKVQLMGRPGKEGNRLAVELMNLPITPEQFYQEQQVHKEELFPQANVLPGADKLIRHLHKHNIPIAVASGSFHKDYLVKTTKHRELFELFPIKVFGDDPDLKRGKPFPDQFILTSSKFADSPIPENVLVFEDSSNGVLAAKAAGMGVVMVPDRRLDEKLYNNPTQVIFSLEDFKPELFGFPPYE 238
            P+  TH+IFDMDGL+LDTER+Y+ ++  +   +  KY W++K  +MG+   E  ++ ++++ LP++ E+  +E Q   +E+FP A ++PGA+KLI HL KH IP A+A+ S    + +KT++H+E F LF   V GDDP+++ GKP PD F+  + +F+  P  E  LVFED+ NGV AA AAGM VVMVPD  L   L    T V+ SL+DF+PELFG P YE
Sbjct:    5 PQPVTHLIFDMDGLLLDTERLYSVVFQEICNRYDKKYSWDVKSLVMGKKALEAAQIIIDVLQLPMSKEELVEESQTKLKEVFPTAALMPGAEKLIIHLRKHGIPFALATSSGSASFDMKTSRHKEFFSLFSHIVLGDDPEVQHGKPDPDIFLACAKRFSPPPAMEKCLVFEDAPNGVEAALAAGMQVVMVPDGNLSRDLTTKATLVLNSLQDFQPELFGLPSYE 228
The following BLAST results are available for this feature:
BLAST of TCONS_00007099-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
HDHD16.508e-7446.43Pseudouridine-5'-phosphatase OS=Homo sapiens GN=PU... [more]
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