TCONS_00007065-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00007065-protein
Unique Name	TCONS_00007065-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	612

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00007065-protein ID=TCONS_00007065-protein|Name=TCONS_00007065-protein|organism=Clytia hemisphaerica|type=polypeptide|length=612bp
WFKVEEINQSFKHIMLKDPHRYLMDGVQHTFQTSTYDELMSSCTTENDTK
TEYSSDVGSLGDIQDVPKQLSELEQDPIYALPFPTTVASILGYDPVTEIH
SMTVDKFKHLNDKVVLQHMNKERKPHLQSTIRLLLKRGANPNASELPMSA
LFFAVKSADPGAVAALLEQNADTSARLNTSYLCPLHIAVALPCMEGIEIT
KLLLHYGADPNLRDSFPEGDMTDGRTPLHVACSREDNFKQCQKIVRLLLE
YNADPNLLCVGNAPLSLAIGSGNDLVIDTLLKYNADPSLRLTHGLGSILC
VAATFQAERRRTPYERMRLIEKLMRNGADMLTPVKISEKYPPGTVVDYGY
HVFAQDRRIACTPYHALSSVEREVYNSRRAMLELLGSRLRAAARAKEDEV
MMQACSSEQFDDAAWNSTGRDDSCGLRFVTIKVGPVRGGVAHAARSESFI
HRDLTNKSHAALSGTGSHHFKQATRKRLRYCYECGRSIGVRLTPCSRCKE
VFYCSKGCKIKAWNLRHRDECAKISGTKSYSQTRAESPTPTSDHNGPVKF
KNSINSQSLFSPRKKSPNSPQRRSPINTPQVKPSTLRHSPTSTQRQSPKN
NEKSKICLPRIK

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_003951	XLOC_003951	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00007065	TCONS_00007065	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR002110	Ankyrin_rpt
IPR020683	Ankyrin_rpt-contain_dom
IPR002893	Znf_MYND

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002110	Ankyrin repeat	SMART	SM00248	ANK_2a	coord: 180..212 e-value: 280.0 score: 9.2 coord: 146..175 e-value: 1700.0 score: 3.3 coord: 111..143 e-value: 1700.0 score: 3.3 coord: 223..257 e-value: 1.6E-4 score: 31.1 coord: 260..289 e-value: 20.0 score: 14.1
IPR002110	Ankyrin repeat	PROSITE	PS50088	ANK_REPEAT	coord: 180..215 score: 10.072
IPR002110	Ankyrin repeat	PROSITE	PS50088	ANK_REPEAT	coord: 260..292 score: 8.523
IPR002110	Ankyrin repeat	PROSITE	PS50088	ANK_REPEAT	coord: 223..260 score: 10.659
IPR020683	Ankyrin repeat-containing domain	GENE3D	1.25.40.20		coord: 121..208 e-value: 3.4E-15 score: 55.4
IPR020683	Ankyrin repeat-containing domain	GENE3D	1.25.40.20		coord: 209..415 e-value: 1.2E-19 score: 70.0
IPR020683	Ankyrin repeat-containing domain	PFAM	PF12796	Ank_2	coord: 129..214 e-value: 2.0E-7 score: 31.4 coord: 221..289 e-value: 7.5E-8 score: 32.8
IPR020683	Ankyrin repeat-containing domain	PROSITE	PS50297	ANK_REP_REGION	coord: 146..330 score: 22.596
IPR020683	Ankyrin repeat-containing domain	SUPERFAMILY	48403	Ankyrin repeat	coord: 127..291
IPR002893	Zinc finger, MYND-type	PFAM	PF01753	zf-MYND	coord: 481..521 e-value: 4.7E-9 score: 36.1
IPR002893	Zinc finger, MYND-type	PROSITE	PS01360	ZF_MYND_1	coord: 481..521
IPR002893	Zinc finger, MYND-type	PROSITE	PS50865	ZF_MYND_2	coord: 481..521 score: 11.456
None	No IPR available	GENE3D	3.90.1410.10		coord: 455..594 e-value: 1.7E-5 score: 23.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 527..612
None	No IPR available	CDD	cd00204	ANK	coord: 148..281 e-value: 2.5562E-21 score: 89.365
None	No IPR available	SUPERFAMILY	144232	HIT/MYND zinc finger-like	coord: 476..524

Blast

[Close]

BLAST of TCONS_00007065-protein vs. Swiss-Prot (Human)
Match: ANKY1 (Ankyrin repeat and MYND domain-containing protein 1 OS=Homo sapiens GN=ANKMY1 PE=2 SV=2)

HSP 1 Score: 272.707 bits (696), Expect = 1.646e-80
Identity = 170/432 (39.35%), Postives = 224/432 (51.85%), Query Frame = 0

Query:  130 TIRLLLKRGANPNASELPMSALFFAVKSADPGAVAALLEQNADTSARL--NTSYLCPLHIAVALPCMEGIEITKLLLHYGADPNLR-----DSFPEGDM---------------------TD-------GRTPLHVACSREDNFKQCQKIVRLLLEYNADPNLLCVGNAPLSLAIGSGNDLVIDTLLKYNADPSLRLTHGLGSILCVAATFQAERRRTPYERMRLIEKLMRNGADMLTPVKI--SEKYPPGTVVDYGYHVFAQDRRIACTPYHALSSVEREVYNSRRAMLELLGSRLRAAARAKEDEVMMQACSSEQFDDAAWNSTGRDDSCGLRFVTIKVGPVRGGVAHAARSESFIHRDLTNKSHAALSGTGSHHFKQATRKRLRYCYECGRSIGVRLTPCSRCKEVFYCSKGCKIKAWNLRHRDECAKI 524
            TI+LLL+RGA+PN   +PM  LF AVK+ D   V  LLE  A T        S L PLHIA ALP  EG++I +LLLH   D + +     D++  G +                     TD       GRT LH+AC RED+ K  + IVRLLL + A+PNLL  G++PLSL+I SGN+LV+  LL   ADP+L LT GLGS LCVA     E +R    ++ LI++L+ +GAD+L PV +   EK   GT VDYGY  F QDRRIA  P+H L   ERE + +R+ +LE +G +LR A  AKE +               W+ T                     +    R+E      +  K  +   G      +Q      ++CY+CGRSIGVRL PC RC  +  CSK CK KAW   H+ +C  +
Sbjct:  529 TIKLLLRRGADPNLCCVPMQVLFLAVKAGDVDGVRLLLEHGARTDICFPPQLSTLTPLHIAAALPGEEGVQIVELLLHAITDVDAKASDEDDTYKPGKLDLLPSSLKLSNEPGPPQAYYSTDTALPEEGGRTALHMACEREDDNKCARDIVRLLLSHGANPNLLWSGHSPLSLSIASGNELVVKELLTQGADPNLPLTKGLGSALCVACDLTYEHQRNMDSKLALIDRLISHGADILKPVMLRQGEKEAVGTAVDYGYFRFFQDRRIARCPFHTLMPAERETFLARKRLLEYMGLQLRQAVFAKESQ---------------WDPT--------------------WLYLCKRAELIPSHRMKKKGPSLPRGLDVK--EQGQIPFFKFCYQCGRSIGVRLLPCPRCYGILTCSKYCKTKAWTEFHKKDCGDL 923

The following BLAST results are available for this feature:

BLAST of TCONS_00007065-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00007065-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
ANKY1	1.646e-80	39.35	Ankyrin repeat and MYND domain-containing protein ...	[more]

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TCONS_00007065-protein (polypeptide) - C. hemisphaerica