TCONS_00007046-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00007046-protein
Unique NameTCONS_00007046-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length184

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00007046-protein ID=TCONS_00007046-protein|Name=TCONS_00007046-protein|organism=Clytia hemisphaerica|type=polypeptide|length=184bp
MIFHIDVLFHFFSLILKNNKMTLGETDKNALIEASISAKDFAYAKYSNFR
VGCALLSQCGKTITGCNVENVSFGLTICAERTAYCKAISEGITKFKAIAI
ATDVKNXSEGITKFKAIAIATDVKNGSMVSPCGACRQFMAEFGNIDIILV
NLDRDTKETTLSHLLPMSFDEDALHNGQENGIKN
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_003942XLOC_003942Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00007046TCONS_00007046Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006262Cyt_deam_tetra
IPR002125CMP_dCMP_dom
IPR016193Cytidine_deaminase-like
Vocabulary: Biological Process
TermDefinition
GO:0009972cytidine deamination
Vocabulary: Molecular Function
TermDefinition
GO:0004126cytidine deaminase activity
GO:0008270zinc ion binding
GO:0003824catalytic activity
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009972 cytidine deamination
molecular_function GO:0003824 catalytic activity
molecular_function GO:0004126 cytidine deaminase activity
molecular_function GO:0008270 zinc ion binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006262Cytidine deaminase, homotetramericTIGRFAMTIGR01354TIGR01354coord: 31..173
e-value: 6.5E-34
score: 114.9
NoneNo IPR availableGENE3D3.40.140.10coord: 14..177
e-value: 6.2E-47
score: 158.6
NoneNo IPR availableCDDcd01283cytidine_deaminasecoord: 32..162
e-value: 1.80408E-37
score: 126.302
IPR002125Cytidine and deoxycytidylate deaminase domainPFAMPF00383dCMP_cyt_deam_1coord: 29..146
e-value: 1.9E-12
score: 46.8
IPR002125Cytidine and deoxycytidylate deaminase domainPROSITEPS51747CYT_DCMP_DEAMINASES_2coord: 26..172
score: 25.056
IPR016193Cytidine deaminase-likeSUPERFAMILY53927Cytidine deaminase-likecoord: 28..173

Blast
[Close]
BLAST of TCONS_00007046-protein vs. Swiss-Prot (Human)
Match: CDD (Cytidine deaminase OS=Homo sapiens GN=CDA PE=1 SV=2)

HSP 1 Score: 111.694 bits (278), Expect = 7.776e-32
Identity = 66/163 (40.49%), Postives = 83/163 (50.92%), Query Frame = 0 
Query:   17 KNNKMTLGETDKNALIEASISAKDFAYAKYSNFRVGCALLSQCGKTITGCNVENVSFGLTICAERTAYCKAISEGITKFKAIAIATDVKNXSEGITKFKAIAIATDVKNGSMVSPCGACRQFMAEFG-NIDIILVNLDRDTKETTLSHLLPMSFDEDALHNGQ 178
            K    TL       L+  S  AK  AY  YS+F VG ALL+Q G+   GCN+EN  + L ICAERTA  KA+SEG   F+AIAIA+D+++                      +SPCGACRQ M EFG N  + +   D      T+  LLP SF  + L   Q
Sbjct:    4 KRPACTLKPECVQQLLVCSQEAKKSAYCPYSHFPVGAALLTQEGRIFKGCNIENACYPLGICAERTAIQKAVSEGYKDFRAIAIASDMQD--------------------DFISPCGACRQVMREFGTNWPVYMTKPDGTYIVMTVQELLPSSFGPEDLQKTQ 146
The following BLAST results are available for this feature:
BLAST of TCONS_00007046-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CDD7.776e-3240.49Cytidine deaminase OS=Homo sapiens GN=CDA PE=1 SV=... [more]
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