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Sequence
The following sequences are available for this feature:
polypeptide sequence >TCONS_00007023-protein ID=TCONS_00007023-protein|Name=TCONS_00007023-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1367bp
MQLLQHLLMXNKTSGNCTAGYYCSHNATSPTPTDGVTGDVCPLGSYCPVG
TGVPKQCTAGTYMNETQAERCLDCPPRFFCTNRINPEPCSAGFYCPGNTG
YDQQPCPTGSYSPLERLQSSIECLPCPAGQFCNQINATTPSGPCQAGFFC
HNGSDTATPSGGHRGFAGPCPAGRYCEAGDPKAPVLCPAGTFNNETHGQN
LTDCTPCSAGKYCETAGLRSPTGECEQGFYCRQGSSVANPSVKTDDHGPC
PIGHYCPANTGNPYKCPVGTFNGLEQQSQCVDCPSGHFCEHGASNYTECP
QGYYCPNGSTIACPEGTYKNFTKGSSLDDCKPCPPGQYCQGVAQINPTDV
CAGGWYCSGGSWTDKPTGNEIYNGTWTCPLYNIGGRCLRGTFCPPGSPSA
QQCTPGFYCHQDEAHNVSGPCGKGHYCSGGTIEQYPFNQTYGDICPPGYY
CVEGSKAAEACREGFFARGEGNDDPNACQHCTAGMYCDRPGLPEPYGNCS
LGYYCPPGQVSPTPADKRCQPGHYCPVASQDHYVCEAGTYQPDAGKGECL
YCPPGSYCDPTEAVSVNASGTNSSSHGVVNPSICPKGYFCPHKTITYKAF
PCQKGYFGNRTSLQSHDDCYPCTPGYFCDRQGMVTPQDKCHVGYYCSEKA
FSPEPRNETEGGGPCLPGFYCESGYSRPLPCPKGTYGAAMHLGHLNECTD
CDGGQFCPEDGASAPNGSCLAGYYCKGRAILSNPVGESYGDECPSGFYCP
VGTTTPYACPPGTFNNQTKATRPEDCLPCEGGKYCGGYANENPDDVCDEG
YYCKSGAYRPRPVEYENLTHNSSQLYTCPIYSVNQTGGICPNGTYCPASS
SNPITCDRGKHCDFKGLGKPLGNCTAGYYCDYGSLSAEPRKCRPGHYCPE
GTPVEEACPVGTFNRDEGKYDIGHCDDCTAGFYCPYPGMVEPMFRCSQGY
HCPKGSSKNDTQECPAGYYCPTGVGAPVPCPAGSYQDRTGQYACKLCPPG
FFCDPVSPLIPVGGPGVVQPANCTAGYYCLQNTSSARENPCLPGTYGDVE
GLEKARDCKRCPGGSYCKGTGETTVSGVCSAGYFCSSQASTPTPQGGTTG
DVCPKGSYCPQESQQGEPCPRGTFGNETQLQNASSCTPCLPGFYCPSTGH
VEPFAKCTAGYWCIEGSIETTPDQQAYGVKCPNGSYCPEGTPHPIQCPKG
KYQPLLQKTQPSDCKACDPGQFCGETGLSATSGDCQEGHYCTLNAGQQNP
SDGTTGNVCPIGHYCPKASEAPRPCANGTFMNHTEAASCYPCPEGFMCTR
QITADPCRQGYYCPVGTGYDIQACPVGTYGAREGLKLESECSNCTGGSYC
NSPGLPEPTSQCDPGFW Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
This polypeptide derives from the following transcript feature(s):
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005576 | extracellular region |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006030 | chitin metabolic process |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0008061 | chitin binding |
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| biological_process |
GO:0006030 |
chitin metabolic process |
| cellular_component |
GO:0005576 |
extracellular region |
| molecular_function |
GO:0008061 |
chitin binding |
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| IPR011641 | Tyrosine-protein kinase ephrin type A/B receptor-like | SMART | SM01411 | GCC2_GCC3_2 | coord: 253..299
e-value: 3.8E-8
score: 43.1
coord: 1262..1307
e-value: 5.8E-5
score: 32.5
coord: 522..569
e-value: 8.3E-5
score: 32.0
coord: 448..499
e-value: 0.16
score: 21.1
coord: 390..434
e-value: 39.0
score: 2.6
coord: 746..796
e-value: 7.4E-4
score: 28.8
coord: 92..144
e-value: 0.14
score: 21.3
coord: 967..1023
e-value: 4.9E-8
score: 42.7
coord: 1026..1079
e-value: 0.057
score: 22.6
coord: 587..640
e-value: 8.3
score: 8.7
coord: 173..225
e-value: 0.18
score: 20.9
coord: 1106..1157
e-value: 0.0018
score: 27.5
coord: 44..89
e-value: 1.7E-4
score: 31.0
coord: 668..719
e-value: 0.0087
score: 25.3
coord: 895..946
e-value: 1.5E-4
score: 31.1
coord: 843..892
e-value: 2.6
score: 13.2
coord: 1184..1235
e-value: 2.1E-5
score: 34.0
coord: 1310..1362
e-value: 3.5
score: 12.1
coord: 302..350
e-value: 4.4E-4
score: 29.6 |
| None | No IPR available | GENE3D | 2.10.50.10 | | coord: 305..374
e-value: 9.0E-14
score: 51.1
coord: 591..661
e-value: 2.2E-12
score: 46.7
coord: 740..824
e-value: 2.1E-14
score: 53.2 |
| None | No IPR available | GENE3D | 2.10.50.10 | | coord: 97..160
e-value: 2.0E-13
score: 50.0
coord: 519..590
e-value: 8.1E-14
score: 51.3
coord: 376..436
e-value: 5.8E-6
score: 26.1
coord: 41..96
e-value: 1.0E-13
score: 50.9
coord: 964..1030
e-value: 8.4E-17
score: 60.8
coord: 825..889
e-value: 1.8E-6
score: 27.7
coord: 445..515
e-value: 7.9E-13
score: 48.1
coord: 1103..1172
e-value: 5.5E-14
score: 51.8
coord: 1181..1251
e-value: 2.4E-12
score: 46.6
coord: 170..240
e-value: 1.5E-14
score: 53.6
coord: 665..733
e-value: 8.8E-12
score: 44.7
coord: 1031..1094
e-value: 8.5E-12
score: 44.8
coord: 1315..1367
e-value: 3.9E-9
score: 36.2
coord: 892..961
e-value: 1.6E-13
score: 50.3
coord: 250..304
e-value: 1.4E-16
score: 60.1
coord: 1259..1314
e-value: 5.1E-14
score: 51.9 |
| IPR002557 | Chitin binding domain | PROSITE | PS50940 | CHIT_BIND_II | coord: 1160..1225
score: 6.48 |
| IPR002557 | Chitin binding domain | PROSITE | PS50940 | CHIT_BIND_II | coord: 1238..1300
score: 6.34 |
| IPR002557 | Chitin binding domain | PROSITE | PS50940 | CHIT_BIND_II | coord: 949..994
score: 7.355 |
| IPR002557 | Chitin binding domain | PROSITE | PS50940 | CHIT_BIND_II | coord: 228..280
score: 6.213 |
| IPR002557 | Chitin binding domain | PROSITE | PS50940 | CHIT_BIND_II | coord: 502..549
score: 6.163 |
| IPR002557 | Chitin binding domain | PROSITE | PS50940 | CHIT_BIND_II | coord: 1082..1136
score: 5.833 |
| IPR002557 | Chitin binding domain | PROSITE | PS50940 | CHIT_BIND_II | coord: 877..926
score: 7.076 |
| IPR002557 | Chitin binding domain | PROSITE | PS50940 | CHIT_BIND_II | coord: 147..215
score: 6.201 |
| IPR002557 | Chitin binding domain | PROSITE | PS50940 | CHIT_BIND_II | coord: 643..709
score: 6.277 |
| IPR002557 | Chitin binding domain | PROSITE | PS50940 | CHIT_BIND_II | coord: 424..489
score: 6.67 |
| IPR002557 | Chitin binding domain | PROSITE | PS50940 | CHIT_BIND_II | coord: 20..71
score: 6.277 |
| IPR002557 | Chitin binding domain | PROSITE | PS50940 | CHIT_BIND_II | coord: 1000..1069
score: 6.962 |
| IPR002557 | Chitin binding domain | PROSITE | PS50940 | CHIT_BIND_II | coord: 722..776
score: 7.101 |
| IPR009030 | Growth factor receptor cysteine-rich domain | SUPERFAMILY | 57184 | Growth factor receptor domain | coord: 949..1088 |
| IPR009030 | Growth factor receptor cysteine-rich domain | SUPERFAMILY | 57184 | Growth factor receptor domain | coord: 249..361 |
Blast
The following BLAST results are available for this feature:
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