TCONS_00006972-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00006972-protein
Unique NameTCONS_00006972-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length162

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00006972-protein ID=TCONS_00006972-protein|Name=TCONS_00006972-protein|organism=Clytia hemisphaerica|type=polypeptide|length=162bp
TLSNGRVVALKEKGETEYVKFEDIKEFLSLAVTKRLNEFNEQVNAMRCGL
EKVVPKAVLTLMTWQELEHRVCGEPEITVEALKKSAHYEDFEDENDTTIK
YLWQAIEKFTNEDRSRFLRFVTGRRRLPTPLYITRSKLTTPANSLPESAT
CSHTLFLPTYTR
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_003893XLOC_003893Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00006972TCONS_00006972Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000569HECT_dom
Vocabulary: Molecular Function
TermDefinition
GO:0004842ubiquitin-protein transferase activity
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0004842 ubiquitin-protein transferase activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.2410.10coord: 73..162
e-value: 8.4E-22
score: 77.1
IPR000569HECT domainPFAMPF00632HECTcoord: 7..161
e-value: 1.5E-36
score: 126.4
IPR000569HECT domainPROSITEPS50237HECTcoord: 1..162
score: 27.318
IPR000569HECT domainSUPERFAMILY56204Hect, E3 ligase catalytic domaincoord: 3..161

Blast
[Close]
BLAST of TCONS_00006972-protein vs. Swiss-Prot (Human)
Match: HECD3 (E3 ubiquitin-protein ligase HECTD3 OS=Homo sapiens GN=HECTD3 PE=1 SV=1)

HSP 1 Score: 172.17 bits (435), Expect = 1.955e-50
Identity = 88/162 (54.32%), Postives = 111/162 (68.52%), Query Frame = 0 
Query:    1 TLSNGRVVALKEKGETEYVKFEDIKEFLSLAVTKRLNEFNEQVNAMRCGLEKVVPKAVLTLMTWQELEHRVCGEPEITVEALKKSAHYEDFEDENDTTIKYLWQAIEKFTNEDRSRFLRFVTGRRRLPTPLYITRSKLT-TPANSLPESATCSHTLFLPTYT 161
             LS+ +VV L   G    V + D   F+ L    RL E  EQV AM+ GL KVVP+AVL L+TWQELE +VCG+PE+TV+AL+K   +EDFE  +D+ ++Y W+A+  FTNEDRSRFLRFVTGR RLP  +YI   KL     ++LPES+TCS TLFLP Y 
Sbjct:  673 VLSDQQVVELIPGGAGIVVGYGDRSRFIQLVQKARLEESKEQVAAMQAGLLKVVPQAVLDLLTWQELEKKVCGDPEVTVDALRKLTRFEDFE-PSDSRVQYFWEALNNFTNEDRSRFLRFVTGRSRLPARIYIYPDKLGYETTDALPESSTCSSTLFLPHYA 833
The following BLAST results are available for this feature:
BLAST of TCONS_00006972-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
HECD31.955e-5054.32E3 ubiquitin-protein ligase HECTD3 OS=Homo sapiens... [more]
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