TCONS_00006802-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00006802-protein
Unique NameTCONS_00006802-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length814

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00006802-protein ID=TCONS_00006802-protein|Name=TCONS_00006802-protein|organism=Clytia hemisphaerica|type=polypeptide|length=814bp
MMDPTVYESLLTNENTKSVLKKHDNKGTEDYTINDYRKKCSQLELRLAEE
SSNYNLEIGKLHEKISKIQSSFEKNELIRQKLEYELTVSQQETNKEKRKR
AEDQKNFKYEIEQLQVHITSLQSKLEYSESELSEVKQEYELRLVKDEENL
KKVEGSVRQVKKENEVIYQEKLAAEQLIIVWKNKHEEVLEKCQVIEKQFQ
DQSFTIQKLLKEGEYAITLESELVGKMKHLQDHIQNVEENIQAERAAHLE
TKFNTEVVQLKLKETESILEMEKAKLIESRQSLENADKKFRELEGAFHKE
RDNLNQYKLKFDKTKEELHLHKTQIAAKDKHLDGITAEVKNYNQHVSEVV
EELDKTKETLVKIEKEKKKAYREVEYLMNNYKLVSDIVISPVKGCDAELS
FLDIVHKLRQMMERFQDNVMDIQNKHKETLLMLDKLEQECSVHREVAWNK
DRALEEAERLVKNAQNNLSKCQVKCASYEERINRLLKEDQNHKQIMDGKD
TQILELKQQTCKTTFEVDQIYQVHMRNMQSIYDLLMRNPSSEESRINQGI
FTVDELKDMIVNRINENSECLQVLSQKYQTLCEELEKNKEDLHHHKSGIK
RLQKLNAQVLSQTEKSLTESQQISEKEKQKHQDEILVLKSRLKVLHEEHE
HLLMKFQDVPVDQLSTILQRLDSYEQINYLNNLLSGVLWGILYQYHALVY
QKKLINHMLQGVGLFKNEIIDIAQSLEEAITGRRNEKLVRRIPRNGIFKF
RRYTIVVLAVNRLLKIKFSKTCCILQQKPSYGHNGLIFFDKVGSSAASLS
GQLSKENTFQCKLP
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_003803XLOC_003803Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00006802TCONS_00006802Clytia hemisphaericatranscript
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 628..648
NoneNo IPR availableCOILSCoilCoilcoord: 269..303
NoneNo IPR availableCOILSCoilCoilcoord: 33..53
NoneNo IPR availableCOILSCoilCoilcoord: 118..163
NoneNo IPR availableCOILSCoilCoilcoord: 447..488
NoneNo IPR availableCOILSCoilCoilcoord: 227..247
NoneNo IPR availableCOILSCoilCoilcoord: 571..591
NoneNo IPR availableCOILSCoilCoilcoord: 339..380
NoneNo IPR availableCOILSCoilCoilcoord: 405..439
NoneNo IPR availableGENE3D1.10.287.620coord: 216..383
e-value: 1.6E-6
score: 27.2

Blast
[Close]
BLAST of TCONS_00006802-protein vs. Swiss-Prot (Human)
Match: CC171 (Coiled-coil domain-containing protein 171 OS=Homo sapiens GN=CCDC171 PE=2 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 7.983e-28
Identity = 192/815 (23.56%), Postives = 371/815 (45.52%), Query Frame = 0 
Query:   51 SSNYNLEIGKLHEKISKIQSSFEKNELIRQKLEYELTVSQQETNKEKRKRAEDQKNFKYEI-EQLQVHITSLQSKLEYSESELSEVKQEYELRLVKDEENLKKVEGSVRQVKKENEVIYQEKLAAEQLIIVWKNKH------------EEVLEKCQVIEKQF-----------QDQSFTIQKLLK---------------------EGEYAITLESELVGKMKHLQDHIQNVEENIQAERAAHLETKFNTEVVQLKLKETESILEMEKAKLIESRQSLENADKKFRELEGAFHKERDNLNQYKLKFDKTKEELHLHKTQIAAKDKHLDGITAEVK----------NYNQ-HVSEVVEELDKTKETLVKIEKEKKKAYREVEYLMNNYKLVSDIVISPVKGCDAELSFLDIVHKLRQMMERFQDNVMDIQNKHKETLLMLDKLEQECSVHREVAWNKDRALEEAERLVKNAQNNLSKCQVKCASYEERINRLLKEDQNHKQIMDGKDTQILELKQQTCKTTFEVDQIYQVHMRNMQSIYD------LLMRNPSSEESRINQGIFTVDELKDMI----------VNRINENSECLQVLSQKYQTLCEELEKNKED---------------LHHHKSGIKRLQKLNAQVLSQTEKSLTESQQISEKEKQKHQDEILVLKSRLKVLHEEHEHLLMKFQDVPVDQLSTILQRLDSYEQINYLN--NLLSGVLWGILYQYHALVYQKKLINHMLQGVGLFKNEIIDIAQSLEEAITGRRNEKLVRRIPRNGIFK-FRRYTIVVLAVNRLLKIKFSKTCCIL 775
            ++ +N E+     +I+K++S  EK E +RQ LEY+L V+++E     R+ AE++    + I E+L    + LQ+K   +E      +Q+++    + E +L++ +  ++   +E +++ +EK   E+ +     KH            E  LE+ ++ E+Q+           Q+Q   +Q + K                     E E++   E  L  + +     ++ +EENI+AERAAHLE+KFN+E++QL++++ E  L++EKA   E+   LE    +F+E+E A+ +E+ N  +    F K    L+L + +  +K+K L+    E K           YN+   SE+ EEL   K+    + +  +   +E+E +++++ +         K  D   SF  ++ +LR+ +  +Q+ + D  N+ K     LD  +Q+   H        + ++E +  + +    LS    KCA  E  I+ L  E QN     + +  Q  + + +  K +    +  +  +  + ++Y       +L++ P   E  +++  F+  EL  ++          +NR NE    L+ + +       EL++ +ED                H  K   K L+   +++  + +K   + Q+I+EK  +K           L  + + HE L++  ++    +L +  QR    EQ++ L    L++G L+ +  +  AL  Q+  +   +    LFK EI  +AQ+L      ++ E  +++    G+ + FR+  I VLA NR LKI   ++C  L
Sbjct:   53 TTKHNAELASYESQIAKLRSEVEKGEALRQSLEYDLAVARKEAGL-GRRAAEERLAEAHRIQEKLCAQNSELQAKTNETEKAFQTSQQKWKEECRRFEHDLEERDNMIQNCNREYDLLMKEKSRLEKTLQEALEKHQREKNEMESHIRETALEEFRLQEEQWEAERRELQFIVQEQDTAVQNMHKKVEKLETEHMDCSDLLRRQTSELEFSTQREERLRKEFEATTLRVRKLEENIEAERAAHLESKFNSEIIQLRIRDLEGALQVEKASQAEAVADLEIIKNEFKEVESAYEREKHNAQE---SFAK----LNLLEKEYFSKNKKLNEDIEEQKKVIIDLSKRLQYNEKSCSELQEELVMAKKHQAFLVETCENNVKELESILDSFTVSGQWTSGIHKDKDKPPSFSVVLERLRRTLTDYQNKLEDASNEEK-ACNELDSTKQKIDSH-------TKNIKELQDKLADVNKELSHLHTKCADREALISTLKVELQNVLHCWEKEKAQAAQSESELQKLSQAFHKDAEEKLTFLHTLYQHLVAGCVLIKQP---EGMLDK--FSWSELCAVLQENVDALIADLNRANEKIRHLEYICKNKSDTMRELQQTQEDTFTKVAEQIKAQESCWHRQK---KELELQYSELFLEVQKRAQKFQEIAEKNMEK-----------LNHIEKSHEQLVL--ENSHFKKLLSQTQR----EQMSLLAACALMAGALYPLYSRSCALSTQRDFLQEQVNTFELFKLEIRTLAQALSTVEEKKQEEAKMKKKTFKGLIRIFRKGVIAVLAANR-LKI-LGQSCASL 824
The following BLAST results are available for this feature:
BLAST of TCONS_00006802-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CC1717.983e-2823.56Coiled-coil domain-containing protein 171 OS=Homo ... [more]
back to top