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Sequence
The following sequences are available for this feature:
polypeptide sequence >TCONS_00006532-protein ID=TCONS_00006532-protein|Name=TCONS_00006532-protein|organism=Clytia hemisphaerica|type=polypeptide|length=256bp
MTYTTNQEVPSWDIYQTQASPMYDLNLPEVISDTDSQCFDVKAEDPYLPM
SNVNAYQAHQNNPSMLASPSMNMPILCRPYNPYSPVSAIQSMASPSPMNT
YAHSPGNSSTYSASPLNSPQQHFSQEDLMMRYRMQQHPMMAAPGYGPRPV
AQPASEYAYYYNEYGMKRRKRDEELSHEELEKRRVRRERNKQAALRCRTR
RRERIDALEQETTQIEEDNTRVEKEIRDLKKQLDELQSLLKEHDCPKQLP
FSGSNA Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
This polypeptide derives from the following transcript feature(s):
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003677 | DNA binding |
| GO:0003700 | transcription factor activity, sequence-specific DNA binding |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006357 | regulation of transcription from RNA polymerase II promoter |
| GO:0006355 | regulation of transcription, DNA-templated |
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| biological_process |
GO:0006355 |
regulation of transcription, DNA-templated |
| biological_process |
GO:0006357 |
regulation of transcription from RNA polymerase II promoter |
| molecular_function |
GO:0003677 |
DNA binding |
| molecular_function |
GO:0003700 |
transcription factor activity, sequence-specific DNA binding |
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| None | No IPR available | COILS | Coil | Coil | coord: 198..242 |
| None | No IPR available | GENE3D | 1.20.5.170 | | coord: 167..245
e-value: 2.1E-13
score: 49.5 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 98..120 |
| None | No IPR available | SUPERFAMILY | 57959 | Leucine zipper domain | coord: 182..240 |
| IPR000837 | AP-1 transcription factor | PRINTS | PR00042 | LEUZIPPRFOS | coord: 229..252
score: 25.0
coord: 190..206
score: 63.24
coord: 208..229
score: 36.93
coord: 173..189
score: 73.53 |
| IPR004827 | Basic-leucine zipper domain | SMART | SM00338 | brlzneu | coord: 178..242
e-value: 1.1E-11
score: 54.9 |
| IPR004827 | Basic-leucine zipper domain | PFAM | PF00170 | bZIP_1 | coord: 180..239
e-value: 2.9E-9
score: 36.8 |
| IPR004827 | Basic-leucine zipper domain | PROSITE | PS50217 | BZIP | coord: 180..243
score: 13.254 |
Blast
The following BLAST results are available for this feature:
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