TCONS_00006479-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00006479-protein
Unique Name	TCONS_00006479-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	459

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00006479-protein ID=TCONS_00006479-protein|Name=TCONS_00006479-protein|organism=Clytia hemisphaerica|type=polypeptide|length=459bp
MDDCNVDIVHVQTITYKDDVVDDVIDKDECLDQSEDELDRLINESIEPVN
NQLEEWQVLTHIFKSFVGTGILGLPSAVMHGGIVLGPLILVGLGAICMYN
IKLLVDTARNMRHNLNISRISYSSISENVFQAYGKRAGTVARYLTDFLLC
SLQIGFCCVYVVFIAHNIQFAVGSLDVRIWMLVILPFLIVPSLISNIRTL
AYLTTIGNVIVLVGLGTIYQYLLTHVQSPSRLPATNGVLNACVAFGQIVY
AFEGVAVILPTEEKLKSRGSFDWLFKVSGCLVILLYASMGILGYLTFGQE
TLGSITLNLPNTAVYQTLQGAFCLMVFFTYPLQLFVSVDIIKSYFPPSKS
TDTESFLDDALLKSLLVFLTCVLGICIPQLDNFMSLVGSVCGVSVGLILP
PIIHAQCFWNQGLTPRQFVLDIFILAIGVFTFVTGFTASMYAIFHRFVEY
PGHTTGPIV

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_003680	XLOC_003680	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00006479	TCONS_00006479	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR013057	AA_transpt_TM

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013057	Amino acid transporter, transmembrane domain	PFAM	PF01490	Aa_trans	coord: 56..439 e-value: 3.1E-63 score: 213.8

Blast

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BLAST of TCONS_00006479-protein vs. Swiss-Prot (Human)
Match: S36A1 (Proton-coupled amino acid transporter 1 OS=Homo sapiens GN=SLC36A1 PE=1 SV=1)

HSP 1 Score: 250.751 bits (639), Expect = 4.864e-78
Identity = 146/417 (35.01%), Postives = 235/417 (56.35%), Query Frame = 0

Query:   50 NNQLEEWQVLTHIFKSFVGTGILGLPSAVMHGGIVLGPLILVGLGAICMYNIKLLVDTARNMRHNLNISRISYSSIS----ENVFQAYGKRAGTVARYLTDFLLCSLQIGFCCVYVVFIAHN----IQFAVGS---------------LDVRIWMLVILPFLIVPSLISNIRTLAYLTTIGNVIVLVGLGTIYQYLLTHVQSPSRLPATNGVLNACVAFGQIVYAFEGVAVILPTEEKLKSRGSFDWLFKVSGCLVILLYASMGILGYLTFGQETLGSITLNLPNTAVYQTLQGAFCLMVFFTYPLQLFVSVDIIKSYFPPSKSTDTESFLDDALLKSLLVFLTCVLGICIPQLDNFMSLVGSVCGVSVGLILPPIIHAQCFWNQGLTPRQFVLDIFILAIGVFTFVTGFTASMYAI 443
            +N    +Q L H+ K  +GTG+LGLP AV + GIV+GP+ L+ +G + ++ + +LV  A +    LN S + Y        E+   ++ +      R + DF L   Q+GFCCVY VF+A N    I+ A G+               +D R++ML  LPFL++   I N+R L+  + + N+ +LV L  IYQ+++  +  PS LP         + FG  +++FEG+ ++LP E K+K    F  +  +   +V +LY S+G LGYL FG    GSITLNLPN  +YQ+++  + + +FFTY LQ +V  +II  +F  S++ +    + D  ++++LV LTC+L I IP+LD  +SLVGSV   ++ LI+PP++    F+++G++P     D  I  +G   FV G   ++Y +
Sbjct:   44 SNSTTWFQTLIHLLKGNIGTGLLGLPLAVKNAGIVMGPISLLIIGIVAVHCMGILVKCAHHFCRRLNKSFVDYGDTVMYGLESSPCSWLRNHAHWGRRVVDFFLIVTQLGFCCVYFVFLADNFKQVIEAANGTTNNCHNNETVILTPTMDSRLYMLSFLPFLVLLVFIRNLRALSIFSLLANITMLVSLVMIYQFIVQRIPDPSHLPLVAPWKTYPLFFGTAIFSFEGIGMVLPLENKMKDPRKFPLILYLGMVIVTILYISLGCLGYLQFGANIQGSITLNLPNCWLYQSVKLLYSIGIFFTYALQFYVPAEIIIPFF-VSRAPEHCELVVDLFVRTVLVCLTCILAILIPRLDLVISLVGSVSSSALALIIPPLLEVTTFYSEGMSPLTIFKDALISILGFVGFVVGTYEALYEL 459

The following BLAST results are available for this feature:

BLAST of TCONS_00006479-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00006479-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
S36A1	4.864e-78	35.01	Proton-coupled amino acid transporter 1 OS=Homo sa...	[more]

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TCONS_00006479-protein (polypeptide) - C. hemisphaerica