TCONS_00006430-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00006430-protein
Unique NameTCONS_00006430-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length290

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00006430-protein ID=TCONS_00006430-protein|Name=TCONS_00006430-protein|organism=Clytia hemisphaerica|type=polypeptide|length=290bp
MALDFAVGCIGGFAGILVGHPFDTVKVRLQSQDQKNIKYTGTWNCFSQIV
KKESIFGLYKGMLSPLYGQIGINAIVFGIHGNVLRALGNQDIKGQFIAGS
IAGGVQSFIASPMELVKIRFQMQGEGISSKVKDTKKDKRYFYKSPLDCLR
KIYKYEGGFQGVFRGISLTLWREIPSFGVYFASYDYLCRQTNAVTENTVN
IWKLLFCGGTAGIVCWIVTYPVDVIKTRQQMDGMGALKYKGVLDCTIKSV
QEEGYSVLFRGLNATLLRAFPTNAATLATVTVTLKLLGHS
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_003667XLOC_003667Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00006430TCONS_00006430Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002067Mit_carrier
IPR023395Mt_carrier_dom
IPR018108Mitochondrial_sb/sol_carrier
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0055085 transmembrane transport
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002067Mitochondrial carrier proteinPRINTSPR00926MITOCARRIERcoord: 95..108
score: 27.87
coord: 214..232
score: 29.94
coord: 165..185
score: 28.26
coord: 108..122
score: 34.86
IPR023395Mitochondrial carrier domainGENE3D1.50.40.10coord: 1..287
e-value: 1.8E-77
score: 259.5
IPR023395Mitochondrial carrier domainSUPERFAMILY103506Mitochondrial carriercoord: 3..279
IPR018108Mitochondrial substrate/solute carrierPFAMPF00153Mito_carrcoord: 198..288
e-value: 6.6E-21
score: 73.9
coord: 4..88
e-value: 9.0E-18
score: 63.9
coord: 95..188
e-value: 2.8E-20
score: 71.9
IPR018108Mitochondrial substrate/solute carrierPROSITEPS50920SOLCARcoord: 90..190
score: 19.359
IPR018108Mitochondrial substrate/solute carrierPROSITEPS50920SOLCARcoord: 199..286
score: 21.719
IPR018108Mitochondrial substrate/solute carrierPROSITEPS50920SOLCARcoord: 2..86
score: 20.754

Blast
[Close]
BLAST of TCONS_00006430-protein vs. Swiss-Prot (Human)
Match: MCATL (Mitochondrial basic amino acids transporter OS=Homo sapiens GN=SLC25A29 PE=1 SV=2)

HSP 1 Score: 301.212 bits (770), Expect = 2.016e-102
Identity = 155/285 (54.39%), Postives = 191/285 (67.02%), Query Frame = 0 
Query:    1 MALDFAVGCIGGFAGILVGHPFDTVKVRLQSQDQKNIKYTGTWNCFSQIVKKESIFGLYKGMLSPLYGQIGINAIVFGIHGNVLRALGNQDIKGQFIAGSIAGGVQSFIASPMELVKIRFQMQGEGISSKVKDTKKDKRYFYKSPLDCLRKIYKYEGGFQGVFRGISLTLWREIPSFGVYFASYDYLCRQTNAVTENTVNIWKLLFCGGTAGIVCWIVTYPVDVIKTRQQMDGM-GALKYKGVLDCTIKSVQEEGYSVLFRGLNATLLRAFPTNAATLATVTVTL 284
            MALDF  GC GG AG+LVGHPFDTVKVRLQ Q  +  +Y GT +CF  I+K+ES+ GLYKG+ SPL G   INA+VFG+ GN LRALG+     QF+AG+ AG +Q  I  PMEL K R Q+Q  G +             YK  LDCL +IY +E G +GV RG+  TL RE PSFGVYF +YD L R       + + + KLL  GGT+GIV W+ TYPVDV+K+R Q DG+ GA +Y+G+LDC  +S + EG+ V  RGL +TLLRAFP NAAT ATVTV L
Sbjct:    1 MALDFLAGCAGGVAGVLVGHPFDTVKVRLQVQSVEKPQYRGTLHCFKSIIKQESVLGLYKGLGSPLMGLTFINALVFGVQGNTLRALGHDSPLNQFLAGAAAGAIQCVICCPMELAKTRLQLQDAGPART-----------YKGSLDCLAQIYGHE-GLRGVNRGMVSTLLRETPSFGVYFLTYDALTRALGCEPGDRLLVPKLLLAGGTSGIVSWLSTYPVDVVKSRLQADGLRGAPRYRGILDCVHQSYRAEGWRVFTRGLASTLLRAFPVNAATFATVTVVL 273
The following BLAST results are available for this feature:
BLAST of TCONS_00006430-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
MCATL2.016e-10254.39Mitochondrial basic amino acids transporter OS=Hom... [more]
back to top