TCONS_00006413-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00006413-protein
Unique NameTCONS_00006413-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length323

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00006413-protein ID=TCONS_00006413-protein|Name=TCONS_00006413-protein|organism=Clytia hemisphaerica|type=polypeptide|length=323bp
MFKYIAIHTRLPLPAVIFLCCLLLLLVILAILYFVVLKNENLCSGLTGHG
TGEEGEEGEALLATETENPDGPVDGGGDGAGGSLATDVEKGLPTGSKKGS
PVASTSARGSPRVAASLVEEKPQPGPSKAPIALPPSPVKPKSPQEPKPAT
NTTTESGGGDVGFISTNEEAPCLAGKVLMSFTYLPAANKLNLKVIRLAEL
PSIKRGGADSVRIHLCVLPMRKQRFKTKIQTASQGVFNQTFQFVHMTKDL
LETCAIRLRVYGKKGFNTTKLIGEAKINLAKVDLTSPLADGDIWKNLSPK
GEVAKYYNIDEEDEPDDIDDWAE
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_003661XLOC_003661Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00006413TCONS_00006413Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000008C2_dom
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000008C2 domainGENE3D2.60.40.150coord: 173..309
e-value: 1.8E-14
score: 53.1
IPR000008C2 domainPFAMPF00168C2coord: 189..286
e-value: 6.4E-8
score: 32.7
IPR000008C2 domainSUPERFAMILY49562C2 domain (Calcium/lipid-binding domain, CaLB)coord: 172..301
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 65..163

Blast
[Close]
BLAST of TCONS_00006413-protein vs. Swiss-Prot (Human)
Match: SYT14 (Synaptotagmin-14 OS=Homo sapiens GN=SYT14 PE=1 SV=2)

HSP 1 Score: 81.6481 bits (200), Expect = 4.371e-17
Identity = 38/115 (33.04%), Postives = 66/115 (57.39%), Query Frame = 0 
Query:  175 GKVLMSFTYLPAANKLNLKVIRLAELPSIKRGGADSVRIHLCVLPMRKQRFKTKIQTASQGVFNQTFQFVHMTKDLLETCAIRLRVYGKKGFNTTKLIGEAKINLAKVDLTSPLA 289
            G + ++F Y     KL + V  + ++P+  R G +S ++HL +LP++KQR KT IQ     VF +TF+F H+  +++   A+R R+YG       K++GE    L K++L   ++
Sbjct:  262 GTLDVTFDYDSQEQKLLVTVTAVTDIPTYNRTGGNSWQVHLVLLPIKKQRAKTSIQRGPCPVFTETFKFNHVESEMIGNYAVRFRLYGVHRMKKEKIVGEKIFYLTKLNLQGKMS 376
The following BLAST results are available for this feature:
BLAST of TCONS_00006413-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
SYT144.371e-1733.04Synaptotagmin-14 OS=Homo sapiens GN=SYT14 PE=1 SV=... [more]
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