TCONS_00005815-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00005815-protein
Unique NameTCONS_00005815-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length286

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00005815-protein ID=TCONS_00005815-protein|Name=TCONS_00005815-protein|organism=Clytia hemisphaerica|type=polypeptide|length=286bp
MTLFFEEKFEVSIFPNKSSTFPGPVKLRISVKNSDKVADLKDKIQGKLND
ASKYEGVFLKKGKKALRLEDDKSLSDYNITEQSLLAASQYVETHLHFTDR
GKTIRYNECIPRKSKESMSDFISKMQEKYKRLITEIQDENGTRVINLNQP
LRHFFKLHIKLCDLKLRLKFLTKVEELKAQEYKCVHHIKGFIRQKYIRHH
NDQIILLDGRKLNDHEILQNLILDRNHDISENTLSLNVIIQEKSFELYVH
LIWENKDLKLDVKSSDTISDIKLQIQDRTGVPLKNL
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_003313XLOC_003313Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00005815TCONS_00005815Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000626Ubiquitin_dom
IPR029071Ubiquitin-rel_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 122..142
NoneNo IPR availableGENE3D3.10.20.90coord: 239..286
e-value: 3.6E-7
score: 29.4
NoneNo IPR availableGENE3D3.10.20.90coord: 162..236
e-value: 0.09
score: 12.3
NoneNo IPR availableGENE3D3.10.20.90coord: 12..89
e-value: 4.8E-8
score: 32.4
IPR000626Ubiquitin domainSMARTSM00213ubq_7coord: 9..98
e-value: 0.0085
score: 25.3
coord: 164..239
e-value: 3.9
score: 8.8
IPR000626Ubiquitin domainPFAMPF00240ubiquitincoord: 253..285
e-value: 6.6E-5
score: 22.5
IPR000626Ubiquitin domainPROSITEPS50053UBIQUITIN_2coord: 245..286
score: 8.851
IPR000626Ubiquitin domainPROSITEPS50053UBIQUITIN_2coord: 164..229
score: 8.786
IPR029071Ubiquitin-related domainSUPERFAMILY54236Ubiquitin-likecoord: 245..284
IPR029071Ubiquitin-related domainSUPERFAMILY54236Ubiquitin-likecoord: 27..85

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00005815-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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