TCONS_00004645-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00004645-protein
Unique NameTCONS_00004645-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length292

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00004645-protein ID=TCONS_00004645-protein|Name=TCONS_00004645-protein|organism=Clytia hemisphaerica|type=polypeptide|length=292bp
MTEKLKPCFGQLIIGPLGSGKTTYCHAVKNFLTGIGRKVVIFNLDPANDN
MPFIPDWDLAELICLKDVMNLLKLGPNGGLLYCLEFLEKNFEHLETKLRK
FQNDGFYFLFDCPGQVELYTHHTSVHSIVDRLGKLDIRLVAVHLVDSHYC
SDASKFISVLLTSLSTMLRIALPHINVLSKMDLIEKYGKLAFDIDYFTEV
LDLHYLLENFKEDQKMGKFAKFNEALIGVIQDYSLVSFSKLHVENKESML
NLMKIVDRANGYIYGGLSKESDDVMEMMSDKVGADLDFEANS
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_002618XLOC_002618Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00004645TCONS_00004645Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004130Gpn
IPR027417P-loop_NTPase
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 84..104
NoneNo IPR availableGENE3D3.40.50.300coord: 2..263
e-value: 8.3E-52
score: 175.4
IPR004130GPN-loop GTPasePFAMPF03029ATP_bind_1coord: 13..261
e-value: 2.3E-72
score: 243.5
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 12..261

Blast
[Close]
BLAST of TCONS_00004645-protein vs. Swiss-Prot (Human)
Match: GPN2 (GPN-loop GTPase 2 OS=Homo sapiens GN=GPN2 PE=1 SV=2)

HSP 1 Score: 325.094 bits (832), Expect = 1.064e-111
Identity = 155/283 (54.77%), Postives = 207/283 (73.14%), Query Frame = 0 
Query:    9 FGQLIIGPLGSGKTTYCHAVKNFLTGIGRKVVIFNLDPANDNMPFIPDWDLAELICLKDVMNLLKLGPNGGLLYCLEFLEKNFEHLETKLRKFQNDGFYFLFDCPGQVELYTHHTSVHSIVDRLGKLDIRLVAVHLVDSHYCSDASKFISVLLTSLSTMLRIALPHINVLSKMDLIEKYGKLAFDIDYFTEVLDLHYLLENFKEDQKMGKFAKFNEALIGVIQDYSLVSFSKLHVENKESMLNLMKIVDRANGYIYGGLSKESDDVMEMMSDKVGADLDFEAN 291
            FGQ +IGP GSGKTTYC  +  FL  +GR+V + NLDPAN+ +P+    D+ EL+ L DVM+ L+LGPNGGLLYC+E+LE N + L  KL   +  G YFLFDCPGQVEL THH ++ SI  ++ + D+RL AVHLVDSHYC+D +KFISVL TSL+TML + LPHIN+LSKMDLIE YGKLAF++DY+TEVLDL YLL++   D     + + NE L+ +I+DYSLVSF  L++++KES+  +++ VD+ANGY +   ++E   +  MMS  +GAD  F + 
Sbjct:   10 FGQAVIGPPGSGKTTYCLGMSEFLRALGRRVAVVNLDPANEGLPYECAVDVGELVGLGDVMDALRLGPNGGLLYCMEYLEANLDWLRAKLDPLR--GHYFLFDCPGQVELCTHHGALRSIFSQMAQWDLRLTAVHLVDSHYCTDPAKFISVLCTSLATMLHVELPHINLLSKMDLIEHYGKLAFNLDYYTEVLDLSYLLDHLASDPFFRHYRQLNEKLVQLIEDYSLVSFIPLNIQDKESIQRVLQAVDKANGYCF--RAQEQRSLEAMMSAAMGADFHFSST 288
The following BLAST results are available for this feature:
BLAST of TCONS_00004645-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
GPN21.064e-11154.77GPN-loop GTPase 2 OS=Homo sapiens GN=GPN2 PE=1 SV=... [more]
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