TCONS_00004302-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00004302-protein
Unique NameTCONS_00004302-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length680

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00004302-protein ID=TCONS_00004302-protein|Name=TCONS_00004302-protein|organism=Clytia hemisphaerica|type=polypeptide|length=680bp
MREDVFIDLVVLPSTVVDKDWSNSDRAALMEQENLPKTTIHKSIDQVLLS
NDELVFIRGIGGIGKTSLLDMLTFKWAKGEIPDLSAIKFLFKFTCRDLND
TSSKFSNLQELFKLKFPEVFESITFDDLMEISDRVLVIVDGIDELKDIYV
QNKPGASSAKSLAQIVFNLLDPKGDWLKNHKVLACGRPKAIEHVKTKLPT
NSKQKTIEVCGFDDENIVKYIENFFGENMEKATTVKDLIAQSYNLRLMAR
VPVFLFVICSVYKDSLLTNSMNTQTELYFYSSLIFIRNHFKSKPNQYPNL
MSIIEDRKVVEMLYSIMQLSVTTYMENKVVFSESDIRSLKCCFPIEETGF
VTKYRAGNQQNVTYQFRHLVLHEFFTALHLCVTKDIEPFKSNRELSSCKP
TMIGVQRMLETNDNELFVTFYDKLDEICKSRLPLLTKLFHTKTKMETKMS
LFKEFVGAFLKLPSGMIKDGNVLHIDIMNDHCVEFLNLFKESRGGNVISP
ELKSADISLLFRRADPQTVVNLIKQLNIIMIKEFYCTDEPLFDEAVQYLT
SLALSCCGEYNTMLNIAPVALHDICVGQGEFILNINPYHTKNKKIPNEWL
QKSNTFDIKIYKISIDKEDDEKAAMDFLRVITSYQKPITLGWWPSSSGIY
HDEETVQAVLEKHHIDTTNIRITTTDRTTT
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_002386XLOC_002386Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00004302TCONS_00004302Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007111NACHT_NTPase
IPR027417P-loop_NTPase
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF05729NACHTcoord: 54..226
e-value: 6.0E-20
score: 71.7
NoneNo IPR availableGENE3D3.40.50.300coord: 30..211
e-value: 7.2E-5
score: 21.7
IPR007111NACHT nucleoside triphosphatasePROSITEPS50837NACHTcoord: 53..145
score: 14.847
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 39..239

Blast
[Close]
BLAST of TCONS_00004302-protein vs. Swiss-Prot (Human)
Match: NOD2 (Nucleotide-binding oligomerization domain-containing protein 2 OS=Homo sapiens GN=NOD2 PE=1 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 2.049e-19
Identity = 90/371 (24.26%), Postives = 163/371 (43.94%), Query Frame = 0 
Query:   55 VFIRGIGGIGKTSLLDMLTFKWAKGEIPDLSAIKFLFKFTCRDLNDTSSKFSNLQELFK-LKFPEVFESITFDDLMEISDRVLVIVDGIDELKDIYVQNKPGASSA--KSLAQIVFNLLDPKGDWLKNHKVLACGRPKAI-----EHVKTKLPTNSKQKTIEVCGFDDENIVKYIENFFGENMEKATTVKDLIAQSYNLRLMARVPVFLFVICSVYKDSLL--TNSMNTQTELYFYSSLIFIRNHF---KSKPNQYPNLMSIIEDRKVVEMLYSIMQLSVTTYMENKVVFSESDIRSLKCCFPIEETGFVTKYRA-GNQQNVTYQFRHLVLHEFFTALHLCVTKDIEPFKSNRELSSCKPTMIGVQRMLET 411
            V + G  G GK++LL  L   WA G+  D     F+F F+CR L   +   S    LF+   +P+V +   F  L++  DRVL+  DG DE K  +   +   S     S+  ++FNLL  +G+ LKN + +   RP A+     ++++T+   N K       GF ++ I  Y+     E       ++ L+ ++  L  +  +PVF +++   +++ LL    S  T T++Y     + I  HF    + P+     +     R  +  L  + +L++        VFS   +++ +        GF+ + +          +F H+    FF A +L ++ D+ P       +  +P    + R+L T
Sbjct:  295 VLVVGEAGSGKSTLLQRLHLLWAAGQ--DFQEFLFVFPFSCRQLQCMAKPLSVRTLLFEHCCWPDVGQEDIFQLLLDHPDRVLLTFDGFDEFKFRFTDRERHCSPTDPTSVQTLLFNLL--QGNLLKNARKVVTSRPAAVSAFLRKYIRTEF--NLK-------GFSEQGIELYLRKRHHEPGVADRLIR-LLQETSALHGLCHLPVFSWMVSKCHQELLLQEGGSPKTTTDMY-----LLILQHFLLHATPPDSASQGLGPSLLRGRLPTLLHLGRLALWGLGMCCYVFSAQQLQAAQVSPDDISLGFLVRAKGVVPGSTAPLEFLHITFQCFFAAFYLALSADVPPALLRHLFNCGRPGNSPMARLLPT 646
The following BLAST results are available for this feature:
BLAST of TCONS_00004302-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
NOD22.049e-1924.26Nucleotide-binding oligomerization domain-containi... [more]
back to top