TCONS_00003640-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00003640-protein
Unique NameTCONS_00003640-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1285

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00003640-protein ID=TCONS_00003640-protein|Name=TCONS_00003640-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1285bp
MRGGLFLCLSFISTLLGCAYGNNTIHNVTITNNLPTQYNILWFDELITLL
PADQKPTKWSVTSMEYQNPEKTMKTASARNLQCSNQQTQQLLCIDQSLNS
LQTSPKFNHQTAINGSLIIVKFEIKIVPKSGISINPPVTRKLEVHFTIAT
PCLAVQHLNTIQCLPEFKSLSATDYKPEIRTIFFKIQVLKHAGESIVLDT
LTIRNVGHKSIPFNFTIYHLDKIFYTSEVITSLESNVNLNTFVKSSPTEF
AVKIYPDISQFYISLFKYYNVKDFCQKPYCYSKSQQLRLASEECTIDVGT
QASRLLQERYQTCHDTSSKLTHTLKPGSDLYLVSISLLKTSYTIRCNYPD
TLLPYSVSIEYRTSLGSYKRLTNSKKIFSTTSYDSFAMHRCRVQFPKTNL
DTIYSEPFLLSLKDVFKGFLRVRIKAVDLPKGRTIKIFTEQNILQHITRL
YTNANLLNIQVKYPDSRIQPPSGTGYHYYVIDMVLLLTKATAELQNMSYV
DWVKDLEQKLSNAKKDQTFNQHLYGWEIRTPFTCRAAIEKYQGKSYRWPL
TGTDHNITIMCPTSNKRSAVASCTLDKDKEYGRFKSFDYKGCVANLASTI
TPLLTEQTPQSQNWTEILEVLVKKNMTIENANETMTTVVKTSAQTGGPPT
GPYEINHVVTLSEMFLPFIPRIANSEKLVFEVIDLLLGEPRTLLEQSQEM
FGTSERLVDLIGSLGETVSTNQYLRQSSANQISFNRTNFALIGQSINVSH
PPNEMIFTTGLEDNLVTMQRSNGQLGKNSIASIEIPHEVFSKILLNRGAE
EVTLVSVGYRESKLFSRLNKSNQDFHINSCVMSAEFRHQKIDRLQIPVIL
KFRTSKMNMIDGSKDLVCSFWNETTQRWSNNGMSSEASQTRDKNFTTCQS
THLTNFAVFLRGSKPIEEEHETALTYISYIGLGISVCGDLLTILTFAIFP
TLRENAQPKILINLCLALVLMSVTFVYSGFRLTDDPTECKGIAFLMQYFL
LTVFSWSLVEAFHTSRGIISPLKVKINSFLWKTSLVAWGTPLIYTGIIFT
IFYEQYGIGQLCFMEPSLALYIGIILPVCLALFINVVALCFIMRALTKKK
AIKRNMSKEERNQALHRLRIILIFCCIFSLTWLTGIPMLFTNDILFQYTF
CIINSLQGCYIFITYCLRNKTVLKYWKMFLSGKSIRQIQIDIKHTSYQLN
TKSQHRKISNMTSTQSNRLSQLQLTPQSNRISTASPNGRKISNILPPCSQ
SPPNRKISDISVFMSSSPPHRKISHLNSGPYHITP
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_002022XLOC_002022Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00003640TCONS_00003640Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000832GPCR_2_secretin-like
IPR000203GPS
IPR017981GPCR_2-like
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
Vocabulary: Molecular Function
TermDefinition
GO:0004930G-protein coupled receptor activity
GO:0004888transmembrane signaling receptor activity
Vocabulary: Biological Process
TermDefinition
GO:0007186G-protein coupled receptor signaling pathway
GO:0007166cell surface receptor signaling pathway
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0007166 cell surface receptor signaling pathway
biological_process GO:0007186 G-protein coupled receptor signaling pathway
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0004930 G-protein coupled receptor activity
molecular_function GO:0004888 transmembrane signaling receptor activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 1092..1112
NoneNo IPR availableGENE3D1.20.1070.10coord: 911..1208
e-value: 1.2E-36
score: 125.7
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1227..1253
NoneNo IPR availablePROSITEPS51257PROKAR_LIPOPROTEINcoord: 1..18
score: 5.0
NoneNo IPR availableSUPERFAMILY81321Family A G protein-coupled receptor-likecoord: 899..1189
IPR000832GPCR, family 2, secretin-likePRINTSPR00249GPCRSECRETINcoord: 1072..1097
score: 29.79
coord: 991..1014
score: 28.11
coord: 1147..1168
score: 26.19
coord: 926..950
score: 20.95
IPR000832GPCR, family 2, secretin-likePFAMPF000027tm_2coord: 923..1160
e-value: 4.3E-28
score: 98.2
IPR000203GPS motifSMARTSM00303GPS_3coord: 864..915
e-value: 4.9E-7
score: 39.4
IPR000203GPS motifPFAMPF01825GPScoord: 867..908
e-value: 1.1E-9
score: 38.7
IPR000203GPS motifPROSITEPS50221GPScoord: 865..915
score: 11.073
IPR017981GPCR, family 2-likePROSITEPS50261G_PROTEIN_RECEP_F2_4coord: 924..1169
score: 26.255

Blast
[Close]
BLAST of TCONS_00003640-protein vs. Swiss-Prot (Human)
Match: AGRG4 (Adhesion G-protein coupled receptor G4 OS=Homo sapiens GN=ADGRG4 PE=2 SV=2)

HSP 1 Score: 149.828 bits (377), Expect = 4.213e-36
Identity = 113/417 (27.10%), Postives = 197/417 (47.24%), Query Frame = 0 
Query:  780 IASIEIPHEVFSKILLNRGAEEVTLVSVGYRESKLFSRLNKSNQDFHINSCVMSAEFRHQK-IDRLQIPVILKFRTSKMNMIDGSKDLVCSFW----NETTQRWSNNGMSSEASQTRDKNFTTCQSTHLTNFAVFLRGSKP-IEEEHETALTYISYIGLGISVCGDLLTILTFAIFPTLRENAQPKILINLCLALVLMSVTFV----YSGFRLTDDPTECKGIAFLMQYFLLTVFSWSLVEAFHTSRGIISPLKVKINSFLWKTSLVAWGTPLIYTGIIFTIFYEQYG----IGQLCFMEPSLALYIGIILPVCLALFINVVALCFIMRALTKKKAIKRNMSKEERNQALHRLRIILIFCCIFSLTWLTGIPMLFTNDI--LFQYTFCIINSLQGCYIFITYCLRNKTVLKYWKMFL 1180
            +ASI +P  +  +I L+      T++   + ++ LF   N +     + + V+SA       I  L  PV++  +    N   G   + C+FW    N     W+++G   + +   + N+T CQ  HLT+F V +  S+  ++  +E  L  I+Y G GIS     + ++T+  F  LR++   KILINLC AL+++++ F+     S F+       C   A  + YFLL  F+W  +EA H    ++    + I +++ K  LV WG P I   I  ++  + YG        C+++     YI ++   CL   +N+   C ++  L    ++K  + K  R   LH L+  +    +  LTW  G        +   F Y F I N+LQG +IF+ +C+  ++V + W++ L
Sbjct: 2604 LASIYLPKSLTERIPLSNLQ---TILFNFFGQTSLFKTKNVTKA---LTTYVVSASISDDMFIQNLADPVVITLQHIGGNQNYG--QVHCAFWDFENNNGLGGWNSSGCKVKET---NVNYTICQCDHLTHFGVLMDLSRSTVDSVNEQILALITYTGCGISSIFLGVAVVTYIAFHKLRKDYPAKILINLCTALLMLNLVFLINSWLSSFQKVG---VCITAAVALHYFLLVSFTWMGLEAVHMYLALVKVFNIYIPNYILKFCLVGWGIPAIMVAITVSVKKDLYGTLSPTTPFCWIKDDSIFYISVVAYFCLIFLMNLSMFCTVLVQL---NSVKSQIQKTRRKMILHDLKGTMSLTFLLGLTW--GFAFFAWGPMRNFFLYLFAIFNTLQGFFIFVFHCVMKESVREQWQIHL 3001
The following BLAST results are available for this feature:
BLAST of TCONS_00003640-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
AGRG44.213e-3627.10Adhesion G-protein coupled receptor G4 OS=Homo sap... [more]
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