TCONS_00003523-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00003523-protein
Unique Name	TCONS_00003523-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	283

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00003523-protein ID=TCONS_00003523-protein|Name=TCONS_00003523-protein|organism=Clytia hemisphaerica|type=polypeptide|length=283bp
MFSFNDFVEWVATNRQSLQTMLIMRKNTKFTLIWITFVIGSFLHDYFPLP
ASYFSNSKNFFNVYFVKKGWGWTVILLSAYITSLLIKQKVNNWRTFYKHL
SRLGVCTVLWFVFTKGFEIIENLTGTCVGGSELSSKQICHRNDYIWNGFD
ISGHCFLLTFCIMIINEELNCSTNIVTCNHNGVTQPADPQRGKGVRYVLG
VPIREEVFENLIEGLSMMLILLMLLWEIMLFFTCLYFHTLSQKLLGFAMG
AGCFYAAYECLFKISHRYIPCTPSMIAELNHES

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_001965	XLOC_001965	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00003523	TCONS_00003523	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR019388	FIT

Vocabulary: **Cellular Component**
Term	Definition
GO:0005789	endoplasmic reticulum membrane

Vocabulary: **Biological Process**
Term	Definition
GO:0019915	lipid storage

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0019915	lipid storage
cellular_component	GO:0005789	endoplasmic reticulum membrane

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR019388	Fat storage-inducing transmembrane protein	PFAM	PF10261	Scs3p	coord: 52..258 e-value: 2.6E-25 score: 89.3

Blast

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BLAST of TCONS_00003523-protein vs. Swiss-Prot (Human)
Match: FITM2 (Fat storage-inducing transmembrane protein 2 OS=Homo sapiens GN=FITM2 PE=2 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 1.179e-34
Identity = 88/268 (32.84%), Postives = 118/268 (44.03%), Query Frame = 0

Query:   23 IMRKNTKFTLIWI---TFVIGSFLHDYFPLPASYFSNSKNFFNVYFVKKGWGWTVILLSAYITSLLIKQKVNNWRTFYKHLSRLGVCTVLWFVFTKGFEIIENLTGTCVGGSEL-------SSKQICHRNDYIWNGFDISGHCFLLTFCIMIINEELNCSTNIVTCNHNGVTQPADPQRGKGVRYVLGVPIREEVFENLIEGLSMMLILLMLLWEIMLFFTCLYFHTLSQKLLGFAMGAGCFYAAYECLFKISHRYIPCTPSMIAELN 280
            ++R   +  L W    + + GS L +  PLP SY SN +N  NVYFVK  W WT  LL  +I +L             + LS L V T +W++ T  F  IE+ TG+C     L        SKQ CH+    W+GFDISGH FLLTFC ++I EE++    + T                          R       I  L + L +L  +W +M   T +YFH LSQK+ G   G   +Y  Y   F     + P  P     LN
Sbjct:   15 LVRAAVRRYLPWALVASMLAGSLLKELSPLPESYLSNKRNVLNVYFVKVAWAWTFCLLLPFI-ALTNYHLTGKAGLVLRRLSTLLVGTAIWYICTSIFSNIEHYTGSCYQSPALEGVRKEHQSKQQCHQEGGFWHGFDISGHSFLLTFCALMIVEEMSVLHEVKT-------------------------DRSHCLHTAITTLVVALGILTFIWVLMFLCTAVYFHNLSQKVFGTLFGLLSWYGTYG--FWYPKAFSPGLPPQSCSLN 254

The following BLAST results are available for this feature:

BLAST of TCONS_00003523-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00003523-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
FITM2	1.179e-34	32.84	Fat storage-inducing transmembrane protein 2 OS=Ho...	[more]

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TCONS_00003523-protein (polypeptide) - C. hemisphaerica