TCONS_00003500-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00003500-protein
Unique NameTCONS_00003500-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length360

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00003500-protein ID=TCONS_00003500-protein|Name=TCONS_00003500-protein|organism=Clytia hemisphaerica|type=polypeptide|length=360bp
IHGDDLDKLSKHITFSLSSFLYFLLISFREKINYIQLQKIKRMSDSPVDS
GNEIEEEEKLSDGEPDEKRVAHIKEDDTDVDLTHARLDEVPSLSHVKNLE
TLCLRQNRIKKIENLGNLSSLVDVSFYDNLLTTIEGLDDVVNLTFLDVSY
NKTKRIQNVEHLTNLKKLFLIKNRISRMENLSTLINITMLELGSNRIRRI
EGIETLVNLEELFLGQNKITKLENLDSLQSLKLLSIQSNRIIKIEGLGNL
HNLEDLYLSHNGIKKIENLENNKKLSTFDVGSNLIEEIENIEHLEELSEF
WCNDNKVSNWNGIEKLRPLKKLETVYLERNPLELQDRSGYRRKILLALPQ
ITQLDATMTR
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_001945XLOC_001945Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00003500TCONS_00003500Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003591Leu-rich_rpt_typical-subtyp
IPR003603U2A'_phosphoprotein32A_C
IPR032675L_dom-like
IPR025875Leu-rich_rpt_4
IPR001611Leu-rich_rpt
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003591Leucine-rich repeat, typical subtypeSMARTSM00369LRR_typ_2coord: 206..230
e-value: 11.0
score: 12.8
coord: 96..118
e-value: 92.0
score: 5.4
coord: 162..184
e-value: 70.0
score: 6.3
coord: 250..272
e-value: 12.0
score: 12.5
IPR003603U2A'/phosphoprotein 32 family A, C-terminalSMARTSM00446LRRcap_2coord: 337..355
e-value: 0.0018
score: 27.6
NoneNo IPR availableSMARTSM00365LRR_sd22_2coord: 272..293
e-value: 0.013
score: 24.6
coord: 294..315
e-value: 95.0
score: 7.6
coord: 206..227
e-value: 1.8E-6
score: 37.5
coord: 228..249
e-value: 1.5
score: 17.8
coord: 162..183
e-value: 0.0033
score: 26.7
coord: 118..139
e-value: 2.1
score: 17.3
coord: 184..205
e-value: 0.0078
score: 25.4
coord: 96..117
e-value: 3.7E-5
score: 33.1
coord: 140..161
e-value: 1.3
score: 18.1
coord: 250..271
e-value: 1.4E-6
score: 37.9
NoneNo IPR availablePFAMPF14580LRR_9coord: 235..355
e-value: 2.4E-9
score: 36.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 45..67
IPR032675Leucine-rich repeat domain, L domain-likeGENE3D3.80.10.10coord: 256..358
e-value: 2.0E-14
score: 52.5
IPR032675Leucine-rich repeat domain, L domain-likeGENE3D3.80.10.10coord: 9..165
e-value: 1.4E-17
score: 62.7
IPR032675Leucine-rich repeat domain, L domain-likeGENE3D3.80.10.10coord: 212..255
e-value: 1.5E-8
score: 33.7
coord: 166..211
e-value: 6.6E-7
score: 28.4
IPR032675Leucine-rich repeat domain, L domain-likeSUPERFAMILY52058L domain-likecoord: 80..355
IPR025875Leucine rich repeat 4PFAMPF12799LRR_4coord: 186..226
e-value: 2.0E-6
score: 27.9
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 98..119
score: 9.437
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 164..185
score: 8.028
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 120..141
score: 5.363
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 186..207
score: 7.527
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 274..295
score: 7.396
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 296..317
score: 5.04
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 230..251
score: 7.797
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 142..163
score: 7.519
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 252..273
score: 9.86
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 208..229
score: 9.568

Blast
[Close]
BLAST of TCONS_00003500-protein vs. Swiss-Prot (Human)
Match: PP1R7 (Protein phosphatase 1 regulatory subunit 7 OS=Homo sapiens GN=PPP1R7 PE=1 SV=1)

HSP 1 Score: 309.686 bits (792), Expect = 8.058e-104
Identity = 163/296 (55.07%), Postives = 213/296 (71.96%), Query Frame = 0 
Query:   65 PDEKRVAHIKEDDTDVDLTHARLDEVPSLSHVKNLETLCLRQNRIKKIENLGNLSSLVDVSFYDNLLTTIEGLDDVVNLTFLDVSYNKTKRIQNVEHLTNLKKLFLIKNRISRMENLSTLINITMLELGSNRIRRIEGIETLVNLEELFLGQNKITKLENLDSLQSLKLLSIQSNRIIKIEGLGNLHNLEDLYLSHNGIKKIENLENNKKLSTFDVGSNLIEEIENIEHLEELSEFWCNDNKVSNWNGIEKLRPLKKLETVYLERNPLELQDRSGYRRKILLALPQITQLDATMTR 360
            P +    ++  D  DVDL H R+ ++     +K ++TLCLRQN IK IENL  L SL ++  YDN +  IE L+ +  L  LD+S+N  + I+ V+ LT LKKLFL+ N+IS++ENLS L  + MLELGSNRIR IE I+TL NLE LFLG+NKITKL+NLD+L +L +LS+QSNR+ KIEGL NL NL +LYLSHNGI+ IE LENN KL+  D+ SN I++IENI HL EL EFW NDN + +W+ +++L+  + LETVYLERNP  LQ    YRRK++LALP + Q+DAT  R
Sbjct:   66 PVDMETINLDRDAEDVDLNHYRIGKIEGFEVLKKVKTLCLRQNLIKCIENLEELQSLRELDLYDNQIKKIENLEALTELEILDISFNLLRNIEGVDKLTRLKKLFLVNNKISKIENLSNLHQLQMLELGSNRIRAIENIDTLTNLESLFLGKNKITKLQNLDALTNLTVLSMQSNRLTKIEGLQNLVNLRELYLSHNGIEVIEGLENNNKLTMLDIASNRIKKIENISHLTELQEFWMNDNLLESWSDLDELKGARSLETVYLERNP--LQKDPQYRRKVMLALPSVRQIDATFVR 359
The following BLAST results are available for this feature:
BLAST of TCONS_00003500-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
PP1R78.058e-10455.07Protein phosphatase 1 regulatory subunit 7 OS=Homo... [more]
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