XLOC_044348 (gene) - C. hemisphaerica

Overview
NameXLOC_044348
Unique NameXLOC_044348
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_60:755600..764102-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_044348 ID=XLOC_044348|Name=XLOC_044348|organism=Clytia hemisphaerica|type=gene|length=8503bp|location=Sequence derived from alignment at scaffold_60:755600..764102- (Clytia hemisphaerica)
ACGACCAAAATCACGAGAAGAAAGAATCGAACCATTCAAATAACGCTTCA
CCATCAACGTTGGTTAATCACCATACGGAGATAGATGAAACAGATACTGG
TAGTGAAGCTTTAGATTCCCAACAACATCAAATGAACCAAGAAGACATTG
AAGATCAAACACCAACGAACAGTAAAATTGAAGAAAAAGAAGAAGACTTA
GATGAAGATACAGAAGAAGAAATAGAAGTCCTTGAAGACATTATTCATCA
TAACATCTTTCTGAAGAGTAGCGCGGAAAGTTCGTTTGCACCCTACACAG
CACACTGTCTTCTACTGAGCAATGCGACAGTGCTGGTCCTTCTTTCACAA
GTATGTTCTACCTTTCTCAATCAAGAAATAGTGAAGCCTTGTGCTTTCAA
CCTGGCGTTTGTGTGAGAACCATGTGGGTCACGCGTTTTGGATGGGAAAA
GACAACTCCCTTTGCGAGTTAAGATTTTGCTCTTGCCCTTCAATAGTTTT
TCACCTTTCAACAAGATGAATATATCACTTATTACGTGTTTCACAAGACA
GTTTTTTTATCACATTATTTGTCAAAACAATGGCCATTAATATTGTATTT
TAGGGGTCTCAACTTTTCGATTTGAAGGAGGTCTTAACCCTAATTAAGCT
TTCTTAAAAATGTGCTTCTCTGATTCTTCCTTCAAAAGACCTCAAAATTT
AGTTCCTTTTTAACCATTTCTTGAAGGTTTAGCCTCAGATTGTTTGTTTA
ACTTCATGATTACCTCGGACTTCCCTTTATTTTATGGTGACGCCTGATAG
ATGAGAATACGATTTCTACATTTTCCATTGTTATTTACTTTTCTTATTTA
GTAGTTGAACTTTAAAATTAATAAACACTATAATAAACCCACCCCTTTTT
GCAGGCGAATGTTGTTTATAAGAACTTGACCTCAGCTAATTTTTATTCCC
TCGAGATGTGTCTTCATATTTTTAGGATGGAAAGAATGATAGGTTTCAAA
TTCTTGGATTCCTTTCAATTGATATCACTTGGTTTTTTATTTTGTTTGTC
TACGATGCAAATTTTTTTTCCGTAGACGGGCGGAAATATCTTTAATGGTC
GGAAATATCATAGCGTAATGGTTGGAAATATCATTTGATGGTCGGAAATA
TCTTTTGATGGTCGGAAATATACAAAACTCTGAAAATTTGAAAATTTCAT
GGTCGGAAATATCATTTGATGGTCGGGAATATCATTTGATGGTCGGAAAT
ATCTTTTGATGGTCGGAAATATACAAAACTCTGAAAATTTGAAAATTTCA
TGGTCGGAAATATCATTTGATGGTCGGGAATATCATTTGATGGTCGGAAA
TATCTTTTGATGGTCGGAAATATCATTTGATGGTCGGAAATATCATTTGG
TGGTCGGGAATATCATTTGATGGTCGGAAATATCTTTTGATGGTCGGAAA
TATCATTTGATGGTCGGAAATATCATTTGATGGTCGGAAATATCAAAAAC
TCTAAAAATTTGAAAATTTTTCTTTTAAAAATGCTTCATCAGCAAAAAAA
TGTAAACAAAGAACTTTGGAATTCTGGACTTAACATAACGAATTTTTTCC
AAACAACTTTATTGTAGATCCTTTCGGAGAGGGGGAGAGGCAGAAGGGCA
CTCGATCTGAAAACGACTATACGTTCGGTGGAAAATTTGGCTTCCAAAAT
CGAACCCTTACAGTGCATCCAGCTGGCAGTAGATACAGAGAAAATTTGGC
CAAAAAATAACCCTTACAGTGGGGGCTAGAGGAGGAAAGGATATAAAAAA
GACAAGAAAGAACGAAGAGTCGTGTTTGAATAAAAAGGTCCATACCACTT
TCTCTCGAAAAAGAAACAGAACATAGTGTCCCAAAAACTTAAAAAAATAA
AAAAACTACTCTCTTGTCTGGCACACACAACAAGTTGGCCACACCACACA
ACCTTTGCTACCATCTTTGTTTACATTTTTTTGCTGATGAAGCATTTTTA
AAAGCGCGGGATATTTCTGACCATTAAATTTTCAAATTTTCAGAGTTTTG
GATATTTCCGACCATCAAAAGATATTTCCGACCATCAGATGATATTTCCG
ACCATTACGCTATGATATTTCCGACCATTAAAGATATTTCCGCCCGTCTA
CGGAAAAAAAATTTGCGTTTACGACTACAGTATTGTATTTCTTCTTTCCA
TTTCTAGCATCGACATATGTTCTTGGCTTTCTACATTCAAAACATGTTAC
GATGTTTGAACCTGATCCTCGTCATCACCAAACAAAAACAATTGTCATAC
CGCATGAAACTGTTTGATGATTGTGAAAAATATCGACAAAAAATTCAACT
CTTCTTCTTACGGACAAGCGGTGTAAGTTGCCCAAGATTCCCTAACGATA
CAACATTCATCGTTTTTTATACGTCCAAGGTTTTTTTTTTCAAATCTCAA
GTTTTTGCAAATGGGTGTCATGATACGCACATGCAAATGGCGCAGGGGAG
AGTGCTCTATCGGGCAAAGTTTTCACTAAATTTTCACTTGTCAAAACAAG
TCTTCTTTCCAAAGCTAAAAATGTGAATGTGATTGGGCTATTCCAGAAAT
ACTCTCTACCCCCTATATTGAGGAGGTGTGACGTCCAGAGTGGTCTGGAA
AATAGAAAAATCCAGGGTGGTCTGTTTTTTTTTTGGATGAAAAATCCAGG
GTGGTCAGTAATATCAGATTGAAAATGGTCAGTATAACGAGGTCGAAAAT
CCAGGGTGGTTCAAAGAAATGGGAGAAAAAAATCCAGGGGGGTCACCTTT
TTAAAAAAAGATCTCCTCAACATAGGGGGTACAAATTTTTTCTGGAATAG
CCTATTCCAGGGCACTCATCCAGATTTCTGAAATTAGTATTTTGACTACC
ATTTTTTAAGTCTTTCCCCCCTCATGTCAATTTCATAAACAATTTGATAT
CCGTGTTAGAACTGCATTTTAAAAGACTCAACTCCTTTCCCTTCACTTTT
AGTATCAAACGAATCGAATGGGAAATTACTACAAAGGTTTTGAGCAGAAA
TGGAACGCTACACAAGATGCTGGGCTTTTAGACTTTATCAACAGTGATAC
TCCTTCTGTTGAAATGAATGCAAGGTATGTGGACTCAAAAACAAATACTT
TTCTTAAAAATCTATTAAGAACTGTTATCCTCGGAAAAGGTGTTCTCCAG
CCAAATGAATCCATGGTATGCCCTGGTCAAATGACAATTCAAGAAAAAAT
CTACAAATTGTCATATAGTTCATCTAGAGCTTGTTAGAATTTTAATTGTT
GGCACTCACACACAAAGCACTAAAACCAAGCTTTAATACACATATTGAAA
GTAACTTCACAAGCATAAGAGTTAAACCAAGGTGGAAGATGTCAAATTCC
AATATCTGTGAGCGCGTTATTGGAATAAGTTTCACGTGACCATTAAAACA
AAAGATTAGCAAGATTCTGATCTAAGACTGTATTTCAAGGCCCAAATAGC
TGATGTCTCCTTCTTTTGTTTTGTTCCTTCAGATTAGAACAGAACCTTGT
AAACCTGATCAAAAGCACCAAAGCACTTTTCACGCAATCCTTCATCTCCA
ATGACGGTCAAAGCTACATGGATGAAGGTCAAACGCGACTATTCCGTTCA
CTACGAGACATCGCAGTGGAGCGATTGAGCCATTACAATCTCTTCTTGAA
TGTAAGAGGACAACAGAATGTCTCGATGACTGCTTACCATAATGACTTCC
CTGGCTTGGTTCATTTCATATACACGAACAGGTTTGTCGGTTATTTGGTC
TTATTAAGTGGCACTGGCATCATACGAAATCGCTCAAACCTCGGTCTGGA
CCAAGGAGTCCCGCGACCCATGCCGTCCTATTTTTTCCTTAGTTGGTGCG
TGTACGCGCACTTGAAATCAGAAATATTTGAAAATTTAAATCCATGGAGT
GATGTCACTTAATGGGTGACGTATTAAGTAAGGAAGTCCAAAAATCTGTT
AAGTTTTTTTCAGTAGACAAAATAACACAAATAATAACAATACCGAAATT
GTCTGAAATTCATCAAACAAGTTCCAGTGTTACAAAAAAAGATGTTATTT
CCTTGGAAATATTGACCACCCTCCCCCTCTATTTATCATCCATTATGAAA
TTATTTAGATAACCAATTAACTAATTATCAGGGCTATCCCTTATAGACCC
CTATAATAAAACATTTATTTTGTCTAATAGGGATTTTAACCTTTCACAAT
GATTTTAGTGTTGCAACTTCTCACTTTTAACAGACAGATGTAACTAACAT
GAAAGTGGGCTAGCACTTTGTCTTTCCAACGGGCTTTTTTCTAAATCGAA
AAAAAGTGTGGGAAATTTTTCTCGTGACAGAGTATGGTATAATATGACAC
TTCTCATAGATTTATAATGAATTTTGAATGTAAAGAAGGCGTAACATAGA
GTTTTCATAAAGTGTTTCATTATGTTTGAAAACCTCTTAAACTAGTCATA
GCTTTCACTAAATGCCCCCACAGAAAGGTCATGTCANTAGATTGTAGGCA
AAATATATAGCGGTGCGGTGAATAAATCAACAAGGTAACCAATCAGAAAT
AGCTTGTTTATTTTTCATTGGCTGCTATATATTTCAACAACTCTATATTG
CTACTTTGCCTAATAAACAATAGTAAGATGATAAGATGATACTGCGTATT
AAATCCATCAAAAAGTTCTGCGCCATCTGAAATAGACCAATCCTAGTTAA
GGCCCGGGTTCCACTTGCGTACGCTGTGATTGCATTCAAAAGAAAAATAA
AGGAATGTCATTGTGGTCCATTCAGGCGTACAGTCGAAAAGTTGAAATGT
GCCTAATTTTTTTTCAAGTGTATAGTACTTTTTCATGATGCAATCTTTTC
TCCAAGCTGCAAGGATTGAAGCCATTAAGATATGATTGCAGCGCAGACAA
TGAAGAGACGGGCCTTCAGGAAACTAGACTTTTTGAGTTTTTAGCTATAT
ACTCTCACTTTATGGTGTTCCTGTATGACTGTCTGTGTGCCTACTCTAAC
CACCGTTAAATGCCATAACTTGGAAAGCTAGAATTGGAGCTATTTCAACA
AACCCCTAGAGCGTAAGTTATTTAGGCTATGGGGCCATCCATACACATAC
AGTACGTACGCAATGAAGGGGGAGAGGGGGGTTAGCAAAAGCGTACATCT
ATTGTTTAAATGACATCATTTCTATTGTTCTCTGCGTACAAGGGGGGAAG
GGGTATCAAATTTTTGGAAAATCTTTGCGTACGTACTATTATATGAATGA
ACTATATGGACGGCCTCTATCACAACTGCATGAAAAAGTGGAACGTGCGC
ATGCAAAGTTAAACGAATGTAAATGAACTTTTTCAGGCTTTTGAAATAGA
TTTACCACACAAACAGTGAAAACACTCTAAGTGAGGTAAATCTATTTTGA
AGACCAAAAAAAAAATATTGATTGACATTCAACNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTATAAACAATAAAGCT
AGTTATTAATATAATAACAGACAAAGATAAATTACAGTTTGAACAAAAAT
ATCAAATGTACATTTGAAAACTTGAGCAAACTTTTTTAAAGATTCCAGAA
AAAGAATTGAAATCATTGCTGAAATAAACTTCTGACTAAATTACAGTATT
TAGTATACAGTTTGAAAGACAAGAAACAAAATTTGACATACAAAACACTT
TTTCTAGTCAACGAATCAGCTCATCATCATAACCAGTCTGCCATTTTGTT
TGTTTTGATTTGCACAAGTAATATTGTAATTCGTGTTANNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNCACAAAAACAAAAACAATTCGCAAAAAATCGAGATTCC
AGTCCAATATATTGCGTGAAGCTATGAGTGCCTCCTCAGTCGCTGCGCTC
CTTGCGGGGGCAATTATTTCTGATGGCGTCTCTCTATTGAAATTTGATGA
CTTGATGAGCGGATTTAGGGTGATAAAGATCAAAATCCTTTGGTCTTTTT
ACTGAGAGCAAAATTTTGTTTTTCGAATTCAACTTTTTCAAACGCTCTAG
AGACATTGAGAAGCTAGGAGCTCTTCTGAAATGCTTTAAGACTGGGACCC
GTTCAAATCTTCCAGTGGTTGTTTTAAAATGGATATGGAAATTTATTTTC
CTCATTGGTTTGATGAAATTCAGATGGTGGTTTCGGTTTAAACATTTTCA
ACTTTTACTTATTAACAATTCACAGACAACTTCCAATTTGTAAGTTTCAA
AGATTCGAAAGGATTTTTAGTTATAAGTCCTATATCTGAGCTGTCTATAC
TTCTCATTAATCTAAAAATATCTCGGAACTGCTTTATTTAACTTGTTCGA
TCCCTCAGAGCACCTGAAAGTCTTCCTTCATACAGATATTATCTATCTTC
ACAGAGTTAGCTGGTCTTCAACGAGTTCTGCTTGGCGAACCTGAAATGTT
TATCTAAGTGTACCGTTAACGAGCCTATTGGGAGCACTTTATAGTTCTTT
TTAGTTCTTGAGAGTCGAAATTTTTTGTGGTTTTTACTTTCGCTATAATA
TTTGGAATATTTTAAGCATTGAGCTTCTGTGCCACCTGGATTTCTCATCT
GAGTATCCATAATGGTGGATTTTCAGCGAATGACCCTTCTGGGACCCCCT
CAGCAAAAAGTGAATTTTTTTCGTGCCAAACATGGGCTGGTCATATATCA
ATCGATCTGAAATGTCTTACTGATCATTTTTGAGATACAAACTTGGTTCT
GCAAAGTTTGCTTTCTCAAGATATAGAGCATTTTCGTTTTATTAAATATG
ACTTTTCTTCAATATCCATTCTATTTACAGAACCACGGATCAGCTAGTGG
CACCTACCGTCAACGTCAATATTGATTCGAACAATTCTTTATACAATCTC
ATCAAGCAACGAATATGGGACTATTGGCAATATTCTGAAACCATGCTGTC
TAAAGGTTATACATCATTCATGCTGAGAGACGGCGACTTTTGTTATTCTT
ACTTTATATGGTTCGAAGATTCGTTAAGGAAACCAATGTTGTCACAAAAA
TCCATGAAAGGCTTGAACGAAAATAAACCGACTGGTATTTTGTCTGGAAA
TTATTACAAGTAAGATTTTACATTTCTCACAATTATTTTTATTTTGAGCC
CAGCATGGGGCCTTTTATTAGCATGTCGCTGTCCGTGGTACTGAATTGTC
CGTTTTTGAAGAAGCAGCGCTTTGTCAATTCAAGTTCATTTTTGAAGAAA
TGGCGTCTTCTGATGCGTGTATACATTGCAAACAAACGACAATTGCGACT
CTTGCTATGTCGCTGGACTTTAATGACGCTTCGACTTCTCGTTTGTTATT
TGATATGCCACTCACTCATTTTTATTGTTTATGTATCGAAGATCAAGCTA
AACCTCTGCCTTAGATGTCCTTCATATCGCAAAAGTAAAAGAAAAAGCCC
TTCATTAGTATTATTCCTCCATTTTTTTCACCATCAGGGACCTGATGTGT
CACCTCTTCCCGTCAGAACCGAAAGGTAGCATCAACTGTTACGAACTCTT
TTGCGTCCACGTTGGATTAGTAAGTAACCAATACGTCGCAAGTTCCTGTA
AGAAGTTATCTCGCAAATTGGAAGGTTCCGGTGAGATCGTTGTTTTATGA
TATTATTATATTATTTTTGTAGTTTTGGATTCTGGAAAATTTGAAAATGT
CAG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00071366TCONS_00071366Clytia hemisphaericatranscript
TCONS_00071365TCONS_00071365Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00071366-proteinTCONS_00071366-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_60supercontigscaffold_60:755600..764102 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
3.81	3.01	3.33	3.02	1.79	0.74	1.08	0.77	0.48	0.73	0.21	0.16	0.26	0.23	0.26	0.58	8.66	8.45	0.42	0.61	5.32	4.74	1.07	1.11	0.81	1.05	2.17	0.25	0.81	0.64