XLOC_044295 (gene) - C. hemisphaerica

Overview
NameXLOC_044295
Unique NameXLOC_044295
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_60:895851..904414+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_044295 ID=XLOC_044295|Name=XLOC_044295|organism=Clytia hemisphaerica|type=gene|length=8564bp|location=Sequence derived from alignment at scaffold_60:895851..904414+ (Clytia hemisphaerica)
tttagaAATTAGAAAGAAAACATGGGAAAGCCAAAAGGTAAAACCTCAAA AGTAAAGCTTGGAAATAAAGCATCCAACAAAAAGACCAATAAAAATGTTG GAGCTAACAAATACCAGGAGAAGTTCCAGTCAGCCAAAATCAAAGCTGGT AAGTTCAAGAAGAAGCCAGCTATAAATAAGAAGGAGTTGATGAATGGTAA AATTGATTACTCACGATACAAGCCTGAAGATGATCATGATGTTGATGATA TGCTTGAATCTGATGAAGAAGATGATATGAAAAGCTACCTGAAGCAAAAT GCTAATGATATGTCTTTTCTTTCCAAAAGTTTAGAGTGAGTGgctatata tatattttcatggCAAACTCTGTCAATGTCCTAATTTTTAACTTAAGGTG TTTGATTATGATTAAGTCAATGTTTgttacaaaaaacaaactacCTTTTC TAAGTTGgtatataaaaaatatcaaaaggcTAAAATGCATGTCAAACAAG GCAAATGACGTGTTTAATAGGATATTATACTCACAAGTAGTTAATATTGT GAAAAAAACTGGGACACTCATTCCAACTCTAAGCTAAAACCATCTTTTGG GAAATATTATTGATATTTCACCCATCTTTGACTACTTCACCACTTTGTCT ATAGGAAAGTAGACTTCTATTATTAGCCTTTTgactaattttctttcaat gatAGTTGAATGCTTTTTAGTAAGgtttatttattattaattGTAGCAAG AACAGTGATGGAATGAAGTCGTATGAAGCTCAGCCAAGGAGTTACTCCAA TGTTCACAAAGAAACAGATTTGAAAGACGACAGAGTTGATTTGTTGCCAA TCAAAGGGGCAACTGGTTTAATTCGAAGGAAAGGGGAGCAAATTGAAGAG CAAGGTAAACTGTTACTAAAACTCAAAACACAAAGACAGGGGTAACTCTC CGACGGGAATTTTGTACATGATACatatcccctatatcaaaattaATTCT GGGGATGCGTGCTTCGATAAAGTGTGGTTCATAGCTTTATTGAAgtgtaa caaaaaataaaattataaaaaagcaaCGCTTTGAAtggaaaatttgatta aaacgCTACTGtcaactttcattttttgatatagtatgatttttttattt caaccatATGCTTGAGATGTTTTAAGATATAAAGTATgaagagttttttt cttttagacaATGAAAATGAGGATGGAGAGGGAGATGGACCGGAAGAAAA CGATTTATTACCTATAATGGAGAAGGAACCCATGTCTGTCATTGAAATTT TAGCTGCTCACAGAGAACAAGTTGTCCAAAAGAAGTTACAAATTGCTCAA TTATCAATGGATATTGTTGAAAATCCCTATGAGAAGGTAACATGACTTAA ATTATTGTACATCTTTGCTCTTTGTCATAATAACCTTTAGCTTTAAGTCT CCAATCTaccattttttttcatttctaagtttcaattaattaaaataatt tctttttcattgatAGCTTGTTTGCTTATTATTATTAGCATAATGTTAGC ATATAATATACATTATTATTTGCAAATCTGACTTGCAATTCAagaaagtg ctctataccatcGGTAGAGCGATATATCAGTCAAGAATAATATACTGATA ATATACATTATTATGTATATTGATTCATTTGTGATTGCCTTTGCCAGGCT ACATCATTTGAGGCGCACAATAGCACGTACACCTAGTGTCTGAGGAGTGC CATCAATCACACCCCATAAAGTTAGTTTCACAACTAAAAGTTGTTTatag cactccttatcacacgcctaaattaataaaatgaatgttttaggagtgtg attgacATCATAcctggaattttcaaatgatgcagcctgctTTGCTATTA TATTATATCTGgatcaataataaaaaaattaaaaagcatGGCCAAATGCT TTTGTGATTAGCTCTATTaattgtcttttttatatttttctatgtaGATT TCACAGCTCAAGCACTTGCTCAAACTAGCAGAGAAAGATGAACCATTGAC CATTCGAAAGCTCGCCCTTCTCTCAATGCTTGAAATATTTAAAGACATCA TTCCCAGGTATATAAAGACAGATCTTTCTGGGAATATCTCGGTTACTATG ATTATGTATAGTCTATTACTCTATCATTGGGGTAATGTTCATTGGAGAAC TACATACAGTATTTACACCATTTTATGTTTGCAACGATACAATGATAAAA AAAGCCTTTAGCAAACTGAACCCTTAAATATATTATACGAAATTATGTTT CAGCTACAACATACGTGAATTATCTGATGATGAGCAAAATGctaaagtat gaatttttttagaaaatctctTAGTACCATCATATCAGAtttatttgttt ctttcttGTCTTCTTACCAGCTGTTTTTTAAGGCATGATAAAAAGTTAAG CAAAAGCCAAAGTATCCTCTTTCCTTATAGAAGTACCACTGTCAAACTGG AACTTGATTAACTATGATTAAACTATGATTATTACtaaatttgattaatt ttacaTGTATTTGACCTGTATTTATACTATCAATATATTAGTTTATTTCT TTTGTCTTTCAGGTGTCAAGAGACGTAAAGAAGATCCGTGATTATGAGCA AAACCTATTGAAGGCTTATCAAAGATACTTGCAATCCCTTGAGGAAAATA TTAAAGgtcattttttctcattttaacAAAACTACAGTATTAAGTgtaaa attagcaaatataTAAATACTCTATCATCATAAACACTTCAATTAGAATA TGCTTTTGATATAAATTTCATTGGGTGCAAAGGAAACTTTTGCTTTCCAG TTTTTTTGTAAAGCTATTTTCCTTGTTTCTTTAGTTTGCAAAAAGTTTGT CAAGAAATCACGTGGCAGCGGTGCACACCATGAAAAGCAGAAGAAATCAA TGGGTAGCCTTGTCATCACTTCCATGAAATGCTTGGCTGAACTCATTAAA AATTTACCCCACTTCAATTTTCGTAAAAATATTATCAATGTGTTGATACC AAATATTGAGCTGTCACAAGATTTGGAGGAGGTGCGTTAACGCTATTTGG TTGTCTTTCCGCTAATTTTCACTACTCTTTTGTTTCTAAGTACAATTCTT TCTGTTTGATATGAAAAATTCTAATAGAGTGTTGTCAATcaatattcttt taaaagacacattttttatattatactaTTCTCCACTTGCTATGGGGTCA TCCATATAGTATGTACGCAAAAACTCTAAATatctgaccccccccctgca cGGGAACAACAGAAACAGTATCATTCAACAAACAACCATTCAAACGTACG TTTTTGCTAAACCCCTCTCTCCCCCTttactgcgtacgtactatttTGAT GGCCTTTTATTGGTGTCTTACATATTGTATCGGAATTGTGTTCATTATTG ATTCATTTTCCGTGTGAATCTTACTGCTATTCATTCTTTTAGGCTGGACA GATATGTTCGAAAGCAATCAAGGAGACTCTACTAGCTGACTATAATGGTC ATATAGCTCTAGATGTAagaaatttccctttttctttTGATCTTGATTCT TCTGATATTGAAAAGATGCTTATGTAAAAACTTTCTTTCTACTCAGGTTG TCACTATCAttcaaaatttggcaaaaagtaAACCAACACTCAGCCCATTG GTAAGTATGCACCCTTTTATGATCATACATAATACTATTTCGATTTTCTT TCACCGCTACTGCTTTCACCGAACATAGTGATACCatacaaaaaaaactg aaaaaaattccCTTAACATGATAGATAGATAatatgagccctccgaatgc attcgggacggacactgcgacttgacagacgcgagctgccaagcAATAGc atataccatgacactcgaacaaCACTGGTAGAGTGATGCTCACGCGAGTC CGAAGCTTATGAGTgcacgtcacaatgtctgtctaatAATCTACCctcac tcttgtatcagagtattGGTGGcaaattcccctcacatggcatgagTTGA CCCGGCCAAAGGTATATTCACATGCCAAGTAAATCGTAGAGACGCGGTGG GCATCTAACTTAGGCCTCCCAGGCCGGAGTCAAGGATGATACTATACCAC TACTCCCTATAACACGGTAGAGGTACAAAGAAACGGGGAAACATCCAGAG ATCAGCTTGATCAGCTCTTTTTGGTTAGTTAGAGTTGTGTATTTTTCAGA CTTTTCAAGATTGGAGGGGATGCTAAAAATTCTGATGATGATCAAAGGTG TGATCAAAATAGTGTTTGGTTTTAGGTACTGGAAACATTGCTATGTTTGC GTGTGGATGCCGACTTAGTTCATGCCACAGAAGAAAAAGGGAATAAGATT GAACGGTTGAAAGCCAAACGAGAAGCCATCAAGAAAATGTCTCGAAAAGA ACGAAAGGTATTTGAATTGTGATCAATTTTTAgaacaaaatgtttaaaaa atatggaaaataaCGTGATTTAATTCTGTAGCTTAGGTTTATCATATTGC TAGAGAATACTCCTGACTAGTAGGTTAGACTGATGATTTGTTATCATGAT GTGGGTAAAATTGAGTTAATTTGTTTCTGATCTTTTGAAATTAACCCTTA TAAATAGGCTCATCGAAATTTTACTTTAggagaaatattttatctttcaC TGTGACAACCCCTGCAAACCCCTACCGAATACGAGGCAGACAGGCTGCAG GTTTTGGGTACAAAATAATCACTACCCTTCTTTTCTTGTTACATCCAGAG GAAAAAGGTGGAAGATAAATTGAACCAAGAGTTGCAAGAAGTAGAAGCCG TTGAAAGCAGAGACAAAATCGGAAAAACGGTAAGTGGTGTGATACACGAG AACAAAGAAATGGAAATCATGAAAATTGCTTTCAATAAACAAAACGGCTA TATTCATTATATATTATAAAGAATCGAACCATTTCTGGATACATGGGTTC AAATGCTCCTAGAATTCTACTTCGAAATCTCCTCCACAATAAAATTGACC TGAGAACTATAAATGAAATGATGGCCTAACTTAATGCGTTgtaaaatatg acttttcttgATTACATTTTCAGCATACAGAGATCTTGAAACGTCTGTTC GTGATATATTTCCGGGTCCTGAAACTGGGTTTCAAATCAGACTTATTGGG GATCACATTACGAGGACTTGCTCGGTTCTCACATCTCATCAATATTGATT TCTTTGGTGATCTCATGAACTGTCTGGAAACAGTTCTCAAGTATGAGGTA TAATGATTAATTCACGCAAATCTTCTTGGAAAATCTTCAGTCATACCATc acaaataaagtttttttagtGCCTGTGTTGTATGGATTTTTATAGTCATT TATATGATTTATATGATACAAGGGCTAATTTAAGAATTTATggttttatc aaaaagaaaGGAAGACGCTAAACGActgttttaattgttttctttacttt tatttCAGGACCTCGATACTCAAGATCGCCTCAATTGTATTTTGACAGCT ATGAAAGTTCTAAGCGGTCAAGGTATGTTGAAtatcactcactcactcac gaCCATTTTGTTGTTAGACGGTAGTTAGTCCAGTTACTTGTCAGCTATAC AATCTGTGAACAATTTCTTCTCTCTTCTCGACTTTGCCCTTAATTGTTTT AAATAAGGACAAAGCCAATggtaaaatcaatttgaaataaaaacttaaaa tcgtGCAACGTCTTAATCTAGAtaatatccagaccgtaaattTTTAGATT CTTCTGGCTCGCGGTCTCGTCTACCCTACCCTCTTGCATTCAAATCCAAG GAAGCATCGTTTGTACGTACATTTTAACAGTTATCGCGGATAACTAAAAT TATCCGGCCCtttcttttgtaaacaaagctaaTAATTACTTATTTGTTCA TTTCGAGAAACGCATATTATAGATTGCTTTTCCTTCCCTAACCTTAGGTG AAGCATTGACGATAGACCCTCGTCAATTTTACACGGAGCTGTACAACGTC CTGTTGAATTTCGATTCAGGTGAGTGTCTCACTTTTAAGTTCTAGGAAGC TTACTATTACCCATGGGTTCGTTCCATTTACTTGAAgtcaaagtgaaaaa taaactaCTGACGGggcattttatttttgactttaacTATAATCTAAGGC TATTACGTAAAAATCTTAATCCTCTTTTTTACTATCTGTTTTCTTGGAGC TCTTTTCTTTGAGCTGTCTCTCAATTTTATTTGGAATAGGAAAGTTATGC TATTTTCACAATCCTTGCAGGATAGCATATTTCTTTGAAACGCCACCCAT CTATTCACTTTTGTCATTGTTAAAAATCTGCTCTCTCNGCATATTTCTTT GAAACGCCATCCATCTATTCACTTTTGTCATTGTTAAAAATCTGCTCTCT CAGCGTCAATCTCGAGGGAGTAAGAATTTTAAACCTTTCTtcctttttca gaaattgagtCAACATGTTTCGATTCTGTGAGACACTGTTTGGAGATCAT GCTGATCAAGAGAAGAAAGCAAGTCTCACATCCACAAATCTTGGGCTTTT TGAAACGTTTGAGTACTATGCTGTTGCAAATGCCCATCGAGCGATCTTCG GACATGTTTCTTTTGTTGAGATCAATCTTCCAGGTATGACTTCTAATGTG TTCTGATTTTACTAAGGCCAGCTCAAAGGGACCCTTTCTGACTAATTTGG GAATTTCTTTGGTTCTACAAATCCCTTCATTGATTAGATTGATATCAATA tactacaaaaaaaaaatgttcatcTATTGATTGAAATGAAGAAGTCTCTT TTCCTAAATTTCGTTGAAATTATTATCTGGTTATTTCCAAAATATCTCAT GATATCTATATATGGACGGGGATTCCAACAAGTGGGAGATACGAAGATAC TAGAGGGCAGTTTTGATTTGGACTTATCACAGGGAATGGATGCATTCACA CCGTCTGTTTagacaatagcgagtttatgtgtATTTTTCTTCAACGGGGA CGGTTAGCTTTCgatttgtctacatcctgatTGACTGAGCATGAACTACG GGTTATTTAAATTCGTTTCAGTCACTCCACcttcctcaaaagtgcaaata cataaaactCGCTAATTAACATCAAAGGGTGGCTATACGCTTATAAGTCT ATTGGTGGGATAAGGTCGTAAAACAACGATGCATTATTATTGTACCTAAT CTCAATGAAATTACCCCATGCTTTAAGGAAAAAAGAACACGAGTCtgatt tcactttttcattATATTAATGTAATAAAATCACCAGCTGTACGAAAAAT GCGATTACTTATTGGACAACGAAAACTTTGGACGCGGGGTATTTCAACCG GACATCACCAATCCGGAGCACAGTAATGCGGACAGCACCGCTTTATGGGA ACTACAACTGTTGTCGAGGTTTTATCAGAACGATGCAGAGTTGTATTGTA AACACGTGATGATTGGTGCACCCTCTCATGGACCTGGATCGTTACCTCAA CGAATGCTACAAAGGTTTGTTATTACCAAAGGGTTGGATCTCAACTCTGC GGACGCAACGCTgattgaatttttaaataacCTGCTCAGGGATACGATCT ATTTTCCCGCTTTTCTTTTGAGAACCTGACCGAAATGTTAGGCTGTCATT CAATTAGTCTAGAGAAAGCTTATGAGCCGTCGCGACTAAGTGACGTCACT CTTTtttatcatattgtcgatttacaTTTTGAGCCTGTGTTTTTAGTCCA GCTCCTTTTTTATTGGTGTGTCTCAGtttaacattaaaataaaatcataG TTTCATCCTTGATGTGAATAGGAAGAGTCTTATTGAGAGGTTCATCGTGA TATGATAGGTGTTAATAGGCGCGTAACGACATAGTTGAGCACTTGACCCA TAAAACATTATTTTCCCATTCATGCTTTTGAATCTATATCCTATGCTTTT TTGTCTGTTCGTTTATGTGTATTACTTTGTGTACCGTGTCATCGTATATA TCTTCCTGTAAGTTTATTttgttgacactctctaataaCCTTGACTGTGG AGCTGTCAAATATTCGGAGACATACTTTTTTTCCCTTCATTTTCAGAGGT GCATCAAAACCGGACTTCAGAACTAAAAAGAACGTGGCAGAAACTACAGA TCTTGACTACTTTGAGAACCTTCCAGAACGAGCCCAAACCACTAGGAAGC AACAACAGCAATCTGAAATCAAATTCAAATCTTCAATTCAACGGTTTGGG AATGAAACCTCTAGTAATAAAGAACTTTATGAAAAAGTTGATAACGAACT CGAGAAATTATTAAAAACGAATTTGATTAATGGCAAGAAATGATTTTACA TAtattattcaattcaatttaatATTCAATTTTACTAGGTAGCTTTGTAA TTTACAGAGTCGAATTTTTAGGTGCTTTTcaggtatttttttaaaagaca aTATATACAATTTGATATGAAATCTATTTCAACTGAATTgtttatgatat tttgtgaCCTTTTC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00071262TCONS_00071262Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00071262-proteinTCONS_00071262-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_60supercontigscaffold_60:895851..904414 +
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
NOC3Lnucleolar complex protein 3 homolog Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
23.09 22.27 6.24 4.45 25.82 20.48 18.15 18.65 15.13 15.91 13.08 12.25 13.54 13.79 17.14 21.14 17.6 18.12 4.7 5.51 11.66 12.03 38.36 34.61 11.65 14.98 5.72 4.53 35.2 38.77