XLOC_044227 (gene) - C. hemisphaerica

Overview
NameXLOC_044227
Unique NameXLOC_044227
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_6:240489..246929+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_044227 ID=XLOC_044227|Name=XLOC_044227|organism=Clytia hemisphaerica|type=gene|length=6441bp|location=Sequence derived from alignment at scaffold_6:240489..246929+ (Clytia hemisphaerica)
CTTTGAGACAatatggaaaattttggaaaacatGAAATATCGGAGGCGTC CTGAGAGAATAGTATCAGGCAGATCAACTGAATTTTCTATTGCTTCTGAT TCTAGTTCAAAACTGGTAGGATAGGAAAGTACATGAGTAATTGAAGTATA TAATGGTAGTCAAGACAAGTTATAGTAACAAAGACATTggctaaaataaa ttttcattatATGAAAACACAATCTATATAAAACgttatatcaaaataaa taaaagtatctaaaaatactctctaaaattgtttttttttagttttgata cAAATACTATCCTCCCATATCCTTGAATCATTATATGTAATACACAATAC AAATTCCATTTTCGTATACCCTCgtatgcattcaaataatattCATAGTA GTATCAACCATAGATTTAAaaagcccgaatggctagatgtcgtgcttcgg ctgaaaagtgtgccgagttTAGAtgggaaatcctacctaggtcacgtgat ataatagaatttcagcgcttgaacAATAAaaagcttcgcaggttttcgaG AACAACAGCAGCAATactttttgcgatattcacttttttttgcttggaag agcttaaagcacgacatctagcccttcgggctttataaatgtGTGGTATC AACCGTTCAAAACAAGTTAGCTTGCATActgtattttatattttcacttT ACTATACAACGCAGCACTGAGCAATAGTAGTAAGGGTAAATCTGACCTGT CAGATATCACAAAATACCAAGAACACACTAAAGATTTTGATTtccaatct taaaaatttcaACGGTACGTCGTCATAGATTTGATTATTTTAACGCCTTT GGTTTTTCTTTCCTCCAGCAGAACCCTGACCACTTGGGCCAGCATCTGgt gatttaaaataaaaatcaatcCCTCTTTGAGGCTTTTCTGCATTCTTTTG AAATGCTTTACCGTTCGTTTTATGTGTATGTCGGCCCCACTCAGGTGCCA TTACCATAGGCTTTGGGTAGTCCTGCCCTAATGAGAACTCCAATCTTTGT AGCTCCCGGTCAGGAATAGTCCAAGGTACATGGACCTTGTTAGCAGGAAG ATTGGTAAGCTCTGGAACCCAAGTTTTCACAAATTTTCCTTCAGCATCAT AATCAAGAGCTTGTTTGATCATATTGAATTTACGGTCTTGTCTTGGATCA TTACCAATGCCAGCTGAATAATTCCAATTACCATAATTACTGCAAACATC ATGATCAAGAAGTTGTGATTCGAACCATTCGGCTCCAAGACGCCAGTCTA ATTTCAAGTCCTTGACCAAGAAACTAGCCACGTTTTGACGACCCCGATTT GACATCCAGCCTGTATGAAGTAACTCTCTCATATTTGCGTCAACAAAAGG AACACCTGTCTCACCTTGACACCATTTCTGAAAAGCAATTTTGTCTTGTT TCCAAGGTAAATGTTTGCCCATGATGCCAGATAAATAGAACACTTTTCTC CCATATTTCCAACATACAAATTTAAAGTAATCTCTCCAGATCAGTTCAAA GATACTCCAGTAAGTGGATTGGTTGGATACACGTTGATTTTCATATCTCT TGACTTCATGGTAGATCTGTCTTGGAGATAAAGAACCATTAGCAAGCCAG ATACTAAACTTGGTCGAGTATTCTTCTCCTAATAGACCATTCCTGGTTTC TTTGTAAGTTGAAATGGCATCAGTGTCCCAAAGATATTTTTGGAGATGTT TCAAGCCAGCACTTTCACCACCTTCTAGTGGAACAGCTGTTCTGTTATCT TGCATATAGCTTTGAACACCGATCAACTTCTCCATTGTAGGGATATCACC AAGACTGGCACCTTTGATAGGTGGCAGTTTATTAAGGGTTAGTGGTGTAG GAATTAAATCACGAATTTCGCTTTTAGATTCTACTCCTTGACGAAACTTG GAATATGTATCTGGGATGGTCTTCTTATTGTATGGAATGTCATCTCTAAA AGTATAAgaacaataaaatcaaataactATGCTAACATAGAGAGAGCATG ATTCAaactagtctacacaatagacagctccaggcttttaggccttaggA GTAGGAGCCTATCTTCNACTCTCGGTCAGGAATGGTCCAAGGTACATGGA TCTTGTTAGCAGGAAGATTGGTAAGCTCTGGAACCCAAGTTTTCACAAAT TTTCCTTCAGCATCATAATCAAGAGCTTGTTTGATCATATTGAATTTACG GTCTTGTCTTGGATCATTACCAATGCCAGCTGAATAATTCCAATTACCAT AATTACTGCAAACATCATGATCAAGAAGTTGTGATTCGAACCATTCGGCT CCAAGACGCCAGTCTAATTTCAAGTCCTTGACCAAGAAACTAGCCACGTT TTGACGACCCCGATTTGACATCCAGCCTGTATGAAGTAACTCTCTCATAT TTGCGTCAACAAAAGGAACACCTGTCTCACCTTGACACCATTTCTGAAAA GCAATTTTGTCTTGTTTCCAAGGTAAATGTTTGCCCATGATGCCAGATAA ATAGAACACTTTTCTCCCATATTTCCAACATACAAATTTAAAGTAATCTC TCCAGATCAGTTCAAAGATACTCCAGTAAGTGGATTGGTTGGATACACGT TGATTTTCATATCTCTTGACTTCATGGTAGATCTGTCTTGGAGATAAAGA ACCATTAGCAAGCCAGATACTAAACTTGGTCGAGTATTCTTCTCCTAATA GACCATTCCTGGTTTCTTTGTAAGTTGAAATGGCATCAGTGTCCCAAAGA TATTTTTGGAGATGTTTCAAGCCAGCACTTTCACCACCTTCTAGTGGAAC AGCTGTTCTGTTATCTTGTATATAGCTTTGAACACCGATCAACTTCTCCA TTGTAGGGATATCACCAAGACTGGCACCTTTGATAGGTGGCAGTTTATTA AGGGTTAGTGGTGTAGGAATTAAATCACGAATTTCGCTTTTAGATTCTAC TCCTTGACGAAACTTGGAATATGTATCTGGGATGGTCTTCTTATTGTATG GAATGTCATCTCTAAAAGTATAAgaacaataaaatcaaataactATGCTA ACATAGAGAGAGCATGATTCAaactagtctacacaatagacagctccagg cttttaggccttaggAGTAGGAGCCTATCTTCCTTAATTTATGCTCGAAA CCGAAACGAATATTTGATAAAACTAAGTAATTTTATcaacagaaaaaaat atgtcagagaaaaaatactaagaaaaatgAGGAAACTCTATTAAATTTGA CATCATACCGAATTCACAGAGAGGAGACTGAAACTTACTTGTGAAACAAT GACAAACCCCAAACAGGGTAGTCTTCAATGCTTTGTTCTTTGCAGAaaga tttgatttgtttttctaaatcaatCTCTTCTGAAGTCACTTCTTTTTGAT AAATGATGGAGGAGACAGGTGCTTCAGAATTTTGACAAAGTTTTACCAAG TCTTTGATGGCTGACAGTGGAGATTCATTTCGAACAACTAAGTTTGAACC AAGTTTTTGTAGATTAGCACGTAGATCAGTGATGCTTTCAATGAGAAATT TTGTTCTGTGTGTACCACTTCTTGGCAAGTTAAAGCTATACGTTCCCTAT AAAAAAGAGAGTTAGAGAAAAGGGAGTTTGGGATAATTTCtgggttttaa aaatttttacaattttctttttttttataagaatagtgtactttggatga gggtcaagtatttttaagaaagtgccaaaatattcttaacatattcttaN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN ctttttgcgatattcacttttttttgcttagaagagcttaaagcacgaca tctagcccttcgggctttataaatgtGTGGTATCAAccgttcaaaatcaa aacaagttaGCTTGCATACTGTATTTTATGTTTTCACTTTACTATACAAC ACAGCACTGAGTAGTAGTAAGGGTAAATCTGACCTGTCAGATATCACAAC ATACTAAGAACACACTAAAGATTTTGATTtccaatcttaaaaatttcaAC GGTACGTCGTCATAGATTTGATTATTTTAACgccttttgtttttctttcc tccAGCAGAACCCTGACCACTTGGGCCAGCATCTGgtgatttaaaataaa aatcaatcCCTCTTTGAGGCTTTTCTGCATTCTTTTGAAATGCTTTACCG TTCGTTTTATGTGTATGTCGGCCCCACTCAGGTGCCATTACCATAGGCTT TGGGTAGTCCTGCCCTAATGAGAACTCCAATCTTTGTAGCTCCCGGTCAG GAATAGTCCAAGGTACATGGACCTTGTTAGCAGGAAGATTGGTAAGCTCT GGAACCCAAGTTTTCACAAATTTTCCTTCAGCATCATAATCAAGAGCTTG TTTGATCATATTGAATTTACGGTCTTGTCTTGGATCATTACCAATACCAG CTGAATAATTCCAATTACCATAATTACTGCAAACATCATGATCAAGAAGT TGTGATTCGAACCATTCGGCTCCAAGACGCCAGTCTAATTTCAAGTCCTT GACCAAGAAACTAGCCACGTTTTGACGACCCCGATTTGACATCCAGCCTG TATGAAGTAACTCTCTCATATTTGCGTCAACAAAAGGAACACCTGTCTCA CCTTGGCACCATTTCTGAAAAGCAATTTTGTCTTGTTTCCAAGGTAAATG TTTGCCCATGATGCCAGATAAATAGAACACTTTTCTCCCATATTTCCAAC ATACAAATTTAAAGTAATCTCTCCAGATCAGTTCAAAGATACTCCAGTAA GTGGATTGGTTGGATACACGTTGATTTTCATATCTCTTGACTTCATGGTA GATCTGTCTTGGAGATAAAGAACCATTAGCAAGCCAGATACTAAACTTGG TCGAGTATTCTTCTCCTAATAGACCATTCCTGGTTTCTTTGTAAGTTGAA ATGGCATCAGTGTCCCAAAGATATTTTTGGAGATGTTTCAAGCCAGCACT TTCACCACCTTCTAGTGGAACAGCTGTTCTGTTATCTTGCATATAGCTTT GAACACCGATCAACTTCTCCATTGTAGGGATATCACCAAGACTGGCACCT TTGATAGGTGGCAGTTTATTAAGGGTTAGTGGTGTAGGAATTAAATCACG AATTTCGCTTTTAGATTCTACTCCTTGACGAAACTTGGAATATGTATCTG GGATGGTCTTCTTATTGTATGGAATGTCATCTCTAAAAGTATAAgaacaa taaaatcaaataactATGCTAACATAGAGAGAGCATGATTCAaactagtc tacacaatagacagctccaggcttttaggccttaggAGTAGGAGCCTATC TTCCTTAATTTATGCTCGAAACCGAAACGAATATTTGATAAAACTAAGTA ATTTTATcaacagaaaaaaatatgtcagagaaaaaatactaagaaaaatg AGGAAACTCTATTAAATTTGACATCATACCGAATTCACAGAGAGGAGACT GAAACTTACTTGTGAAACAATGACAAACCCCAAACAGGGTAGTCNGCCAG CTGAATAATTCCAATTACCATAATTACTGCAAACATCATGATCAAGAAGT TGCGATTCGAACCATTCGGCTCCAAGACGCCAGTCTAATTTCAAGTCCTT GACCAAGAAACTAGCCACGTTTTGACGACCCCGATTTGACATCCAGCCTG TATGAAGTANCAAATCAATCTCTTCTGAAGTCACTTCTTTTTGATAAATG ATGGAGGAGACAGGTGCTTCAGAATTTTGACAAAGTTTTACCAAGTCTTT GATGGTTGACAGTGGAGATTCATTTCGAACAACTAAGTTTGAACCAAGTT TTTGTAGATTAGCACGTAGATCAGTGATGCTTTCAATGAGAAATTTTGTT CTGTGTGTACCACTTCTTGGCAAGTTAAAGCTATACGTTCC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00071152TCONS_00071152Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_6supercontigscaffold_6:240489..246929 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
5.77 4.35 2.56 1.32 3.4 1.45 1.87 2.75 2.01 1.84 1.64 1.9 1.48 1.69 1.5 1.92 3.96 5 0.93 0.77 9.67 6.75 6.2 4.8 2.12 2.05 5.5 4.08 6.71 4.59