XLOC_043952 (gene) - C. hemisphaerica

Overview
NameXLOC_043952
Unique NameXLOC_043952
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_57:609831..613880+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_043952 ID=XLOC_043952|Name=XLOC_043952|organism=Clytia hemisphaerica|type=gene|length=4050bp|location=Sequence derived from alignment at scaffold_57:609831..613880+ (Clytia hemisphaerica)
GAAAATTAATCCTATCATCatcttctattttttttagataataTATTAAT GAAAAGAACATAATGAATTTTGCACTTGAAAATTTGAGCATCAAAGAAGT CAGTCAAACAATCAGGTTTTCGTTTGAAATCAAAGTTGATGAAAAGACTA TTGGTCGCTGCGATATCTCACttaaaaattcatcaaagaaagtaaatttt atagATGGTGAGcagaataattttctttttcaaccaaATGAAGAAGGACA GCATCAAGTGCACCATGATGTTGTACAACATACAGATGTTTCAGCTATTT TAGAGCAATTGGCGCTACCAAAATCTAAAGTAAACACAGAAGAGAAAATT GCTGCTTTCAATATTTCCCAAACAAATGATGACGATATTGCTGATAGAAC ACCAGAATTGAGTGATGAGGAAACAGATCCTCCTGCAGAAACTGTTACAA GCTCCTTTTATGTTTCCGTCGTTGATGAGTCAGAAGTAAATTCTGAACAG CAGTCTCCAGTAATAAGTACTCAACCAAAAGGACATGATAAGAATTCTTC AAAAAAGCCTCCACAAAAACGATCATATGAATTAATGTCAACAGAGTGTG ATACTGGTAATGGTTCCTATCCGTATCAAAATATTCAGCTTGAAACTCCA AAAAAGCGTTTTCAATGCGAAGAATGTGGTAaacaatttaaaatgaaatt tgNGTCCAAAGAAGCGTTTTCAATGCGAAGAATGTGGTAAactatttaaa atgaaatttgatatgAAGAAACATGTTAGTACTGTACAtttaaagataaa accttatcCGTGTGTAGACTGTGATAAAGCATTTGCTCATAAAGGCGACT TGACTAGACATGTCAATGATGTgcataataaaatgaaaagttttcacTGT GGAGAATGTGGTaagagttttgccagaaaaagcCACCTTGCAAGACATCT TAACGATCATTTAGGAATTAGGCATTTCCAATGTAACGATTGTGGTAAAC TTGCAGCAACTAAAGCTGAATTAAAAAATCATCAGATCATTCATAGTGGA GTCAAAGAATTTAAATGTGAGAAATGTGATAAATCATTTGCATTAGCAAG TTATCTCAAACAACATGTGAAAATTTCTCACTCTGAAACAAAGGATTTCA AATGTTCACAATGTGATAAAAGCTATACTTCCAAACCAAGCCTTACTAAA CATCAAAAGCGCGTCCACAAGCCAAACTCCACCAATAGTTCTGAGAAAAC AGTAATGTAACTCCTTATTTATtgtcattattttcttttctctaTCTGGA AAATACTTTTGGTGTTTCAATTTCTCTTTTATTTACAATGTTGTTATCCT CAAACCCTATTTATTTCATTACCCTTAAAACCCTTCAAGCATCTTGCATC TTGCTctagtaaaaaataggaagatgttGATAGGGTTAACAGTTGTTATG AGGACTGAACTGAGTTCTATAGATTGGTCTCTTCTATTTCTTTTCCTCAT TTCTAACGACATAACAATCTCCTCCAATAATCTAgtaatttaaaaacatt aattAGAGTTTTTCGATTTTAATTCCTTATGGGACTGTGTGGAAACCGAT CTCAAAATAATAAGCCTAATGACACTGACAAAGTTTCCACGTAATAGCCT AAAAAAATAGTGCTCACTCGAAGTGAATAGACTTGGGACTGGGATTGAAA ATTTTGGTTTGTAGCACCAGTCAGTTTGCTGACACATTTCAAGTCCATAC AGACAGAAGTCGtccacatgactaaaggttcaatctcaaaccaagtgtct tggaaaattggaaatcttgcaattctgttctgcctttgagattggccttt ttgtcatatgaaaacGTAGACTATTCCTCTACATGAAAAAAGGGCAACCT CGATCTCAAAGATGACGTCACCACAGTCAAACTTTAAATCTTGTAAGgta ctaattttgagatttaacctttagtcatgtgaacGACGATAAGATAAAAT TTAATAATCATGTCCATAATTGACAATCAGACATTGAAGATTGATTCTAA GAGGGTAATCATTTGAGGGAAGCCATTATTTGAGGGAGACGATTATTTGA GGGGCTGATTATttgaagggggcgtttattgaaaATCTTTCCTCAAATGA GGAAAGGAGTTTATTCGACGGGATGTTTATTCGAATTAATAGGGCAATAA AATTAACACCATTGACAAACAGTTTTTCtattattcaatcatttttttta agaaaagtttttcaaaattaatctcATCATCAtcttctattttttatttt agaggATTTGTattagaaataaaaatgaataacCATGAATTGAAGATTGA GAAAACCTCAATACTATTGGAAACAACTGATGTTTCAGCTCCAATCAAGA TGACATTTGAAATCAAGAGTGGTCAAAAAGTCATTGGTAATTGCCAAGTG TTGATGGAAAATTTTGCTACTACTTTAGAATTAACTGATGTTCGTGGAAA TGGTTTCCTGTTTAAACCAAAAACAAAGAACCGTAGAATTAATCCTCCTT CAAGCAGAAATTTGAGTAAACCACTACAGTTGATTAATAGGAATTCTGAA CAGCAAAAAGAAGCTGGAAATCTCTTGCTAGGCCTGATTGATGCAGTTAA CCACAATCATAATCAAAGAACTTTCAAAGCACCAGTTTTGAACTATCAAA ATCAAGTAAGTACAGAAAGCATTGACAATTTCCCTGTTATCAAGGACTCT TATAGTATTGCTAACACTGTAAATAAAGATCTTAACAAAGATGATAGAGA TAACCCACTTCACAAGAATGATATGGATATACCTATAACAGATCTTCGTT TTGATGTTGTTGTAGAAAAGAATCTCACCCAGAGTAGTTCAAAATCAAAC TCAAAGGAGGAAAATCTAAAGCGAAGCTCAGAATGTACTGAAAATGCACA ATCTGTCGTAGATGAGAACTTATTAAAAAACACTACAAACATACCGGACG CAAATAAACAAAATAGTGGAGGGATGTCAGAACCTGTTGAAATTCTACTG GAGGTTATGGATAATGAAGAGATTTGTACAATCAAAAACCAGaggaaaag gttaaaaaaacatCAGTGTAATGATTGTGGGCTTTTATTTTACAAGAAAA GTAGGCTCGAGAGCCATTGCAATTCAGTTCATAAAGGTTTAAAACTATTC GAGTGTCATGAGTGTGGTAAATCATTTAGCAGAAAAGACTATCTTAAAAT CCATCAAAATAAGCATGAAGGAAATACGCCTCACAAGTGCAAATTATGTG AAAACTCATATTTGTATCGAAACCAACTTATTCAGCATGTAAACAGTGCC CATAAGGGGATTAAATCATATCAATGCGAGGAATGTGGTAAAAGTTATTA CTATAGTAATGATCTTAAAAGACATCATGATAAAATCCACAAAGGGCTCT CACCACATACCTGTGATTTGTGTGCCAAATCTTTCTTAAGAAAAGATCAT CTTGAGAATCATAAAAATGCTGTACATTTAAAGATTAAAAGCCATAATTG TGAAGTTTGTGGAAAAAGTTATACAAGGAGAGAACACCTTAATAGGCATC AAAAGATGCATCATTATTTCAATTGCAATGAATGTGGTAAATCGTTTGCG CGAGAAAATGNGCATCAAAAGATCCATCATTATTTCAATTGCAATGAATG TGGTAAATCGTTTGCGCGAGAAAATGTTCTGGCAATACATCTTGTCACTC ACAAAGGAAGACCAATGACACCACCTCCCTTAGATGGAGCAATACAATGA CTTTTCTTTATTCATCATGAATGAATGCAAAGAGTGTGGTAAATTGTTTG CACATAAGCTTTTAGCAAGGAACTTTTTTTACCTTGATTGGATGATTCAA TGTTGCAACTTTTTACAAGAAAATTAATAATCCATTCgtatataattttt gattttgtggaAAACCTCTTTCAACATTTCCAACCTTATTATAAAGTCAA TAGTGTAGttcaattttcaaacaaatcaataaatgtaatacaccctttgt
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00070644TCONS_00070644Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00070644-proteinTCONS_00070644-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_57supercontigscaffold_57:609831..613880 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
12.34 14.07 9.63 8.92 10.52 7.75 4.73 5.45 2.21 2.4 3.29 2.14 1.62 2.51 2.04 2.66 2.99 4.14 1 1.29 2.25 2.11 10.84 10.82 3.38 4.45 1.67 1.46 7.3 8.13