XLOC_043056 (gene) - C. hemisphaerica

Overview
NameXLOC_043056
Unique NameXLOC_043056
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_493:406474..410097+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_043056 ID=XLOC_043056|Name=XLOC_043056|organism=Clytia hemisphaerica|type=gene|length=3624bp|location=Sequence derived from alignment at scaffold_493:406474..410097+ (Clytia hemisphaerica)
CCGGTATAAAAGTCTTAATTTGTGAAAGAAATTTCATGACATCACTTTTT
GTTGTCTTAGTAAacattaaagaaaataatttcgtACTCATATGACGTAT
GCCTGAATCTGATGGAGtaaaaaagctataaaaaaGCGTAGGCTAAGGTC
TTGACCTTACCATAGAGAGACTTTCTGTAGATAAGAAGTAGaggtttaaa
ataattttataaagtCGCTTTTCTTTGGGCAGATAATAAGCTAAATCTTA
CTTACAGAAGAAAACATTAGTTGTTGGTCATTAGAAAGAAACTTTAATCA
CTTTTCTACAAAACTGTTATTGATACCATGTATCCAAGCATGCTTTTATC
GTGTATTCTATTGGTCCTGTTAGGAACTACAGAGCTTGCACCGGCCCCAT
TGGACGACTTATCGGCCTGCGTGAACCCATTCACCAATGAAACTTACAAA
GATGGAGACAATTGGATGGAGGGAAAATGCGCACATTGTTCATGTGACCA
AGGAAAACGTTTTTGTGCTTTGGAATCCTGCAAGATTGATTGTGATCCAA
AATACTTAGTCCAAAAGGAAGACAGATGTTGTCCAATCTGTGTCCCACCA
CCACCTAAAGACTGTATCGATGAGACAACTAATACTACCCGACCACACAA
ATCTAACTGGAAGCCTGACGCATGCTCTTCATGCACGTGTGAACACGGTG
AAACCATCTGTGCAACTCAAGATTGTGCACCAGTTATGTGTAAGGACCCA
GTTACACCAGAAGGTGAATGTTGCCCACGATGCGTCACACAAGAATGTTG
GGATAGAGAGTCGAAATCATATTACAAAGAAAGTAAGTTTTCTTGCTTCT
TTACTCACCGGAGACTTCTTATATTTCAACTTTCACAGCCCTGGACATTC
TACTATCTATTGAGTATCCAtgattcacaaaaaaaaaaaaattcaaattc
agatAGTTGATACTACTTCATTCTAATCAATAAAGCCAAAAAGTCGCAAG
ATctttggatttcttttttgaaaaaagcgtttagaaactttgtatgtatG
TAAGTCCACGAGAATGCAAAAaggaaactttaaaaaatgctgAACATTCA
AATCTTAAGCATCTTACATTTGTCATTCCACTTGCATCAATAATCTAAAC
ATAAGCGGAACTTTCATCATCTTCTTAAATTCTACTCGATTTCTTTCCAC
AGTGGACAAATGGACAATGAGTGACGGCTGCACATCGTGTTTCTGTTTCA
TGGGCAGCCCAATGTGTATGTCACCTGGCTGTGCTCTTGAAGAATGTGAC
GAAGGTGTGAAACATGTCAAAGTAAAAGGAATTTGTTGTCCAGTCTGCGA
AAATAAACTCATCTGTGAAGTAGAGGATGGTCGAAAATTCGTCGAAGGTG
AGACATGTATTTTGTAAGACTTGAGACACAACCATTTCTCACATTTTTGG
GGACTCCTTTCTAACTGATATAATGTCTCGAAATTTTTCCTGTGATATCA
ATTCGCTGGGATGTGATCCTCGCAGTTATACTGCAAAGCAAAGAAGTTTC
ATTTACACTAGATTTCTAAGTTGTAAACAATATAGATTAGAAATCCCCAC
GTATCAAAACCAGGTATTTCCATATCCATTAACTTGGCTACAACTTCAAC
CGCAGTGTCCAAAGAAATGTTACTGGGGTGCATCGAGACAGGAGTGTTTC
AAGATCTTTTTCgccaaataattttcaaaatacaagCCAATCACTTAACA
ATTGAGCCAAATTGGACATAACcttcaataaaaatttgattacagAACGA
GCATATTGATTCGTTTTCTAAATAAGATAATTATTTATATATGACAATCG
ATTGAGTTCTATGTCGTCAATCAGGTGTGATATTTAATCAATCTCGGGTC
CAAATACTAAGTCCATTTTTCAGAGAGAAACATAGGTCCTTTGTGGGTCT
TATTTCGCCGGACagttttctctttcttttcttttaatttctggAAAACT
TATAATTGGacataattttaatttcttctttaaaattctACATAGGAAAC
CGTTGGCAAGATGATGATTGCAAAGTTTGCAAATGCACCAAAGACGGAAT
CCAATGTAATAATCCAATCTACGAGAAAGATCAATGCGACAGCAACTTTG
TACAATTGAATCAGAAATGCCCAAAAGTTTGCTTGAATGGTAAGGCGTTT
TAAAATCTATAATCTTTTGCCACACCCTCTTCTAATAGACCCGATAGAAT
TTTTTCAGTAGCTTGTGGGGGTAATAATAATGGTCTGAAGCTGGATGGAt
gttgatattcccatgtttttcgTGGCTGGGGGTTGGAATTTTACTGCTTT
gaagccagaaaattcagtgaggatggaaaaaatagctcCATATTTTACCT
CAAAGATTTGTTTACATTCGATTATTTTCATCGGGGACGAAAATTGGACT
ATAATTTTCAACTGGGAACGatatttttgctaatttttccagtgggtcgg
GGTTCCAACGGGCCCGAGAAGGAGGTGACCATCATATCAGTTCATCCATG
TAGCCAGCTCttgtattgttttgaaaaaagtctgAAGACTGTGATAGATA
GTTTAACCAGACCTGATTACTGTGagaatttttaatcaaaagacaaTATT
TTTTGTCCGTCAATCATAATTTTGTCATAAAATGTCTTTGTCTAAATTTA
AACCGTATTGCTTCGAGTAAACGCCCCTTCCTGTTGGGACTTCTTCCAAA
CTGATAAAATATGTCTGAATATCCTTCCTTTGATATCAATACCAATACAG
TCACCTTAGTAATATCAATACCCTAGAGGAAATCATTTCAATGAACGCTC
CCCCTCTTCAAATAAACGCGCCCCATCAAGGCGTCTGATGATTAATGTAA
ATGTTTTctatttcatttaatttttagcTTCGAAACTCcgtaaagaagaa
aaacaacaagaaggggaaaatgaaaaggaagaagaagaagaagctgAGGT
CAATCCGATCTATCCTTGATGATGATTATCCCCATTCCTTTTTGCTATgt
ataaagtttaaaaagatataatttattagtaaatgaaaataaaaaacaat
agaaaaaataaatgatttggGTCGATGaataatttcgaaaaaaaaaacat
ttttaacagtGAAAGGAaggttttattttctaaaaaaaaataaccAACCG
TCAAGTGACAAGCAAGCTCGAGCCCAGGCCCTATCACTAACATCCATTGG
TTAAATCCAAAAGAGGTggaagtggctctgggtacgagattgacTGACAA
GCTTGTTAAGAATAAATTCAATTGTGAATATTACAGTGTTGAAAATTCTA
ATATTTCTTACGTGTGACCAACTTTTTGAATCTGATATATTTAAGTTTGA
AAGATCTTTTCcatgtttatattttatattattttatattctataacagt
tttttataaaaaagtaatatAATTTTGTACTCgaactttttttagaaaat
aaaccTTTATTGTTAATAAAAGAGTTTTAATCGTCTTTTTTTTGAGACAG
CACTactaccattgagtttaaagacCGAAGGGCTAGAGAAGAATCTCTAA
catttcccaggcaagaaaagaTGA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00069097TCONS_00069097Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00069097-proteinTCONS_00069097-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_493supercontigscaffold_493:406474..410097 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
9.6	9.53	4.75	4.74	34.61	33.41	44.29	54.49	41.16	63.71	88.42	67.96	152.85	162.8	83.22	66.71	81.34	137.23	250.65	415.37	329.21	336.77	261.28	349.83	495.07	416.51	66.21	77.48	1112.9	1128.5