XLOC_042857 (gene) - C. hemisphaerica

Overview
NameXLOC_042857
Unique NameXLOC_042857
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_487:48772..54683-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_042857 ID=XLOC_042857|Name=XLOC_042857|organism=Clytia hemisphaerica|type=gene|length=5912bp|location=Sequence derived from alignment at scaffold_487:48772..54683- (Clytia hemisphaerica)
ATAGAAAACACGAAAATTACAAAAACAGAAAATGCAGATATCCGAGGTGC TGAAACTATTCGATGCATCGCTCAGCCAGGAGCAGTGCTGGAGTATCGCT TATGGTGTTTGTAAATCATTGCTGCTGAAGAAACGTGAAGACATTCAACG TAAAGAAAGAATCAGATATATCCTAAGTCTGGATTCTCTAATCCTGACAC AACGTGGTGAAATTGAGATTCTCCATTCTGAACCAAATCTCCATGAAATC CAAAAAGAATCAGAATTGATTTTCTCTATTGGGAATTTGATTTGCAGATG TCTTGATTTTGGATTAGATGAAGTGGATATCTGTGAAGTTCGCTTTCAAG ATGACATGGCTGAGCTCATCGGAGGTAAGGCTGAAAAAATTCATTTTATT ATTTTCTTAGAGTTCTTTAGAATTGAGTTAGTACGCCCTAGCTGCCACAT GACGTCAAAAAAAACGACCATATAGCGTCAGTTAAACGCCAGATGAACGT CGTGTGTCAGTCTTTTTGGAATGCGCTTGAGCTTGAAGTAAAACTTTTTA CTAAACACCCCTATATCAAATACCGCATTCTAGTAAATCAAACATGATTA GTACTAAGGCTGGAGTAGGAAGCTTGCATACAATGGTATGTAATGATAAA GGCGACCCATTTTCTCAAATTTTTGTATTGACAGTGGCTGCCAAACGGTT GGAAAGTCTAATCAAATAATGTATTGTGGAGATCAATGGGTTACCAATGT TATATGTGATTAGATTACTCCTACTTATAATCACTCCTAATGGACTTTAT AAACAAATTTAATTGAACAGCCATAGAATTAAATATTTCTTGATAAATTT TGATTGAAACAGTACTAGTTATTTTGTATCTGCATAGAGTTCACAAATTT CCTCAAAATTCAATTAAAAGTGAAACGATAATTTCTTTATTTTTGATTTT CTTTCGATATACTTCGTTTGCATTTGAATACTTTGTTTGAATACTAGGCC ATAGAATCAAAACCTTAATCGATAGGAGAACAACAGATTTGCAGGATCAA GTCCAGGACGACCTTTCATAATTTGGATTGTCAAGAAAAAAAATTCTTTC GAATTCACTCGAAATTTGCTCAAACTGAAAAGTCTATTCTGAACCTTGAA GTTGTAGATTTAAGAAGTTCGAATTAGAGAGGTTTGACTACTCTACAACA CACCTCATTACAGCGGAAGGTGGGCGAGAAATCTCGTTCCAATTCAATCA TTGTCCTCTTTAAAACCAACTTAAGGTTCATTACATAATTTCCGTTTGCT GACCAACTTGTCAATTCCACTGGACATTCTTCACAAATAGTTAGAGATGC TTTTTTCACAGAAATAATCCTGTTTGTTAATCCATTTTGAATTGGTAAAA AGGAAATCGAATGTAACGGTCTTCATCCTGTTTACTTGTCAATTAAAATG CTGTATTTAGCCGGCCGGGTGGGATGGGTTCTGTCAAGATAATCGAAGGC TATCCTATTTGTAAAGATTCAAGAATTTTTAACCAACATTCAGTGCCTTT CTGCCTTTTACTCCTTTTCCAGTAAAAACCTATTTTCTTATTCTCAATAC CGTCGATTTTAAATAGCTTTGACTATCTTATAATTTCGAAATTTTAATAC AGTTAAGGAAAGGTTTGCCCGAAGATTCCCTGCTTTTATGGAAAGTCGGC TTACTGAGTGAAAAATGAAACCGTAAAAATCAATTCCTAGTGAAAATTAT TATTCTAAGAATTTCGGAATTTTGGACTTTCAGAACCTTGGGTCGTGAAC ATTAAAATGAAACAGAGGTGTCGATAAAATTTCTACAAACCAATTTTCAC AAAATGTTGTTTTTTTTCAAACTGTGTTTTGACAGACGATAACAATCCTT AGAAAATTACAGTAGGTATTAAGTATCATTGATATTGTTTAATTTGTTTA TCATTAAAAACGCGTGGGAAGGGATCATGATCAATTTCTACAAAACGAGG GATTTCCGGAATATGGACAGACCGATAGACGAAATATGCTACTCCGGATA AAACACCGGATTAATGACTTTTCGATGTTTGTCACCTGTGCTCAGCTTAA TTAAGTGGCATATCAAGCAAGCTATTTCTCCTGACTTCAATAACAAGAAT TACTAGTAATAAAGAACATCGTAGCTTCATTCACTTACTAATAAGCATCG TATTCTTTTACCTACTTGGCCTTCTTTAAACGCGTTATTCAAAGGGCAAA CTTATTTTACAAGATCGAATTTAAGCTCTGTCTGTTGGAATACTGTTTAT GTCTGTCAGTCCGTAGATAGCAATATATAAATAAATAGTTTGCATACGAT AAATCATTTTACTGCATTACTTAGCAGAAAGCTATGCAGCTCACTCAGCA AGTCAAATGACACAAAAGAGGACAATCATCCTGCTGTCTCGTTGAGACTG AGAAATAAATAAAATGGAGAAAACCCACATAATTTCGATCCTATATTACT CATTTTTGACAACAACTTCGTAGTTAATCCAATTTTCACAAAAGAGAAAT AGGAGGATTCAAACATTATTGCACATCCCGTTAAATCGAATGCTAATTAA TGAAATGTCACAGATTTTTCATAAGAAATATTAAAATTCAAACACTCATA CCAACACAACAAATTTTTCTCAGACTCGGAAATATAGATTCCAAAAGCTC TATTGTTCTTGAAATCTGTCCTAGTTTATNCACCACATTACTTAGCAGAA AGCTATGCAGCTCACTCAGCAAGTCAAATGACACAAAAAGAGGACAATCA CCCTGCTGTCTCGTTAAGACTGAGAAATAAATAAAATGGAGAAAACCCAC ATAATTTCGATCCTATATTACTCATTTTTGACAACAACTTTGTAGTTAAT CCAATTTTCACAAAAGAGAAATAGGAGGATTCAAACATTTTCAGTAAAAG GATTCAAACATGATTACACATCCCATTAAATCAAATGCTAATTAATAAAA TGTCACAGATTTTTCATAAGAAATATTAAAATTCAAACACTCATACCAAC ACAACAAATTTTTCTCAGACTCGGGAATATAGATTCCAAAAGCTCTATTG TTCTTGAAATCTGTCCTAGTTTAACATCTTGCTTTAACGAGGAATTTCAT ATAAGAACTATTGCCAAACTTTTTATCGTGATGAAAAACTGTTGTCAAAA TTTCCTAATAGAACTTTAAAGCCAATTCTTTTAACTAACTCTATTGATCC TTTATATAATTTTCTCTTTCGTTTAATTCAGGAATGGTGCTACAGAGCAA TGAATTCGATGAAGGAATAGGTGATACTGACAGCCTCGGTGAAAATTGGA GTGAAAACAAAAAATCCGATTCTTTACGAAGTTTCAAATCGTTGGTTGAA GTTTTACGATTCTGTGAAGCACGATTATTACGAAAGAATATCGAATGCAT AGGAAATCATTACTCGAACGTATCGCAAGCTCTTTACTTAGAAGCATCTG AACTAAAAGCATTCTTAGGGCATGTTTTGCACGATTTAGACACTTCCGAA AAACCGACAACTTATAGTTTCCAGACTAAAACGTACATAAAAGAGTGGGC TAAACTGTGGATCGAAGTTATGGGTGAGGTAAGGCAGAAAACGAAAGAGA TCAAAACACAAACTGATGAATCAGCAGAAATTATCGCTCCAGAGACTGAA TATTACAAATGTACACCATTCACTAGAGAAAACTTAGAGAACACTGAAGA ATTACAAGCTTCGATCAAATCTTCGAAATCGCTTGATGATCTTGAAACAC TCCCTGAAGACGCTGAAAGCCGAATCTTTGATTTTCTGAAATCTAGAGTC TCAAGTCACGATGAGTTAAACACTTCACGATCCATGACTCCAGATAGCCT GGATGACCTAGATGATCTAGACTTTGAACCACAAACCAAAGTTCCGTCAA AGAAAAAGAAACTCGGTGTCCATGATAAGTTAGTTAGAAAAATCTCCGAT TGGGACCAATATAGCTTGGATGACACNGGCATGTTTTGCACGATTTAGAC ACTTCCGAAAAACCGACAACTTATAGTTTCCAGACTAAAACGTATATTAA AGAGTGGGCTAAACTGTGGATTGAAGTTATGGGTGAGGTAAGGCAGAAAA CGAAAGAGATCAAAACACAAACTGATGAATCAGCAGAAATTATCGCTCCA GAGACTGAATATTACAAATGTACACCATTCACTAGAGAAAACTTAGAGAA CACTGAAGAATTACAAGCTTCGATCAAATCTTCGAAATCGCTTGATGATC TTGAAACACTCCCTGAAGACGCTGAAAGCCGAATCTTTGATTTTCTGAAA TCTAGAGTCTCAAGTCACGATGAGTTAAACACTTCACGATCCATGACTCC AGATAGCCTGGATGACCTAGATGATCTAGACTTTGAACCACAAACCAAAG TTCCGTCAAAGAAAAAGAAACTCGGTGTCCATGATAAGTTAGTTAGAAAA ATCTCCGATTGGGACCAATATAGCTTGGATGACACTTTAGAGAAAGACTT TTTGGATGGAAACTTCGAAACTAGTGATGATAAAAACACTGACAATAAAA TTGATACTGAACTTGAGTTAGACGATTTTTCAGATTCAATGTCATCATTG AGAAGATTTACAGCACCTGTGCTATCCAGCCATAAGAAAAGGATTTCGAA AAGTGAAATGTGTTTACATCAAATAGACATTGATGAGATAACCACAGAGA ATTTCGAGCAAGAAGATTTATGCAAAGTTGGTGCAAGCTTGACTGAGATC TTCAAAATCAGACAAGAACTGACCAGAGCGGAGTTACAGTTCAGTCAAGA TCAGGATGTGTTAAAACAGAAAAAATGTTTCGGTTGCCACAAAAACAAAT TCACATTTTTCCAACGAGCTAGAATGTGCGCTGTATGTAAGAAGAAATAC TGCATCAACTGTTTGACAGAAAACGTTCCAATTCCGCCATCTTTAACCGA AACTCTTCCTCCCAATGTTGACGTCACATATAATGCAAATCAACCGTCTT CCAACCTTGTACGGTCTAAAAGTATGCTCCATGTTGGACCCTCTACAACA ATCAAACAGTTACCATGGCAAAGAGACGCTAAAGTGAAAGGTGTTCGACT GAGCATGTGCAATGAATGTCATGTGTTTGTGGACAGTATTAAGAAAGAGC GAGAAAGAATCGAGTGGAAAGTCCAACTGGACTTAGATTTGTAAACTTTT GTTTTTCACTTTCTTTAGAAAGTAATAACTCACCCTTTTTTCCCAGCTGT AACACAACGTTGTTTCAACGTTCCTCTAACGTCAAATGGACGTTGTGAAC ATTACATGGACGTTGAAACAACATTGTGTGCCAGCTGGGATGGGATAGTT ACTTGATTTTTTTTGAAGATTTGAATAACAGGCTGGTACTGTTTTGTAAA TTGCAAATCTTCTATGTTTCAGTAAAGGGGCCGGGGATGGACTTTATTAA CCCCCATCAATCTTGAACTTGAGTATTGTGTTCTTCATTTGAGCCATATC ATTCTTTGTGTGTTTACCCTTTTGTAAATAGCTTAGTTTCGTGAAATTTT TAAAATGCATATTTTTTATTTCATTCATATTCGAATTATTTATGACGCAT GACAAAAGATGAATTTATCCCATTATTTTAATTTTGAAGATTTATCAAAA TAAATAATTTGAAAAAAATAATGAAAATATTATTCTTTCTTCGAAAAATC CTCGAAAAAATCCATCCTCCAAACAGGCTAAAAGAAGAATCGCTTTAACT TCAGTCAGGATGTTGTAATGGAGGTATTCTTATAGTGCCCAAACCTGATT TCTATCCATTTTGATCCATGTTGATTCCCTCAGACCCTTTATGTTGAGTT TTCCCAATCTCA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00068700TCONS_00068700Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00068700-proteinTCONS_00068700-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_487supercontigscaffold_487:48772..54683 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.87 1.54 4.09 4.14 0.71 0.8 2.74 3 2.3 3.97 2.79 8.35 11.96 9.75 10.08 4.5 4.24 6.67 2.79 3.5 0.73 0.65 3.91 4.28 0.78 1.23 6.39 7.06 7.69 7.76