XLOC_042716 (gene) - C. hemisphaerica

Overview
NameXLOC_042716
Unique NameXLOC_042716
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_485:177468..180959+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_042716 ID=XLOC_042716|Name=XLOC_042716|organism=Clytia hemisphaerica|type=gene|length=3492bp|location=Sequence derived from alignment at scaffold_485:177468..180959+ (Clytia hemisphaerica)
ACGATGACCAGCGAAAATTTTCTAGAGGTGAAAaggcatcaaattttaag
ggtttttcactgaaagaaaaataaactttaccgttgaaatcttgttaaat
tgtgaaaaaactgcgTGTGGGAAGTTCCAACTCGATCCGGTTTTCcttat
tcttaacttttttcccaCTTCTTCCTGATCTGGAAGTCTGCTCACCCATT
TATTACCCGTTTGGGTGTCAAGTTAATTTCCTGctcgggaaggttcttcc
cattttGGAAGAATCTTCACGATCGAGTTGGTGGCACAGACTGACAGGTC
AATATTAatttgagctgtgatactcatgGTAATCTATTAAAGCTGCTCAC
Gacactttcttactctcttgctatttgtcctatttttatctgattctcat
caTCAGTAGGATGATGAGAAACGTTGTATGAGATTTTTACTATGTCTATA
AAGTGAAAGATTCAAAACGATAAATCTTAGTGGGGGAGGTGTGCCAAGAC
TAAGNTTCATATTACTATGTCTAAGTGAAAGATTTAAAACTATAAATCTT
AGGGAGTGAGGTGTGTGCTAAGACTAAACAGAATCAACAATATAACTAAC
TATTAAATTAATTATTAATTTCAGCACCCGTCGATTCCCTGGCTACGATG
ACGAGTCCAATGAGTTTTCTGCTGAGGTCCACAGAAATCACATTTTAGGT
CAAAATGTTGCTGAGTACATGAGAAATTTAtctgaagaagatgaagaatc
attcaaaaaacaattttctcaaTACATCAAAAATGGAGTCACAGCTGATT
CTGTAAGTCAATAAAAAGCTTCCTTAGTTCTTTCTAGCTTTTTTACACAA
ATCCCTTAGTTGTTATAACAATGGCTGTTTTTAATTGTGAAGTACGAATT
TATAAGAGCATCAAAATGAGAAAACCATCAATTTCTGACATGATTTGCTC
AATATATAAGGTGGGACACTCTGAATATTGTCTTATTCTTTTATACTAAT
TGATATTCAAGCTAGGTCAAGTTCTtataataccttaagggaactaattt
tggcagatTTGGCGAAATTAGATGAAATTCGCCAATTGCTCACtagccaa
aataagttcccaccaaaattacattttttgtttccttgcctaaataatcc
ttgaaattcatcaaaataaggcaaaatagaacagatttacgctgtcattt
gccaaaattagttcctgccaaaatttaaaaaattcactattcgtCAAAag
aagttcccgccaaaattttttttggatatttgctgcccgccaaaattagt
tcccttaaggtaaccaACACAAAGAACAAtggaaatttcaagaatattaT
GATTGGATTTTTTATCAAAGGAACAAATGTGTCAAttaagaaaaatcaat
ttctcgTTCTTTTCTTCTAGATGGAAGGAATATACAAGAAATGCCACGCT
GCCATCAGAGCTGACCCTTCACCGGCCAAGAAAGCTGACAAAAAAGAATT
CAAAGGAAAACGGTTAGTAGTTACAACTTTATACGAGCGTTTTTGTTGAG
TATAAAAACTCAAGCAATTCCAAAGATCTACCTGTCGCTAAATTTCTATC
ATTTGTATTTAAGCTTTGATTTTGCCGTATTTTTttggatgagctggagt
ttttgtaaaatactcactaattggtcatttgaagaaAGGGGCCGTCCAGA
TAGTACGTACGTTACGTAcacactaaaatgtcgaaaatcaaGTTCCCCTG
TACCCTTAAGCGTGGTTTTCATCTGGCGATAAGAACGAGATAACCACAGT
GCGCATGATATCAAATCGCATTTTCCCCTTTCACGATAGAAAAACTACGA
ACGGTCCTCACTACAATCTCTCTTCTCTCTTTTTATTGACCTGTGTGTTA
AGTTTCATGATTGACAACTACAATATCTATACAATAtcatcaatttcaac
aaaatgttAGAAAAAAAGAGAGGGAAATCTACTCACTTTAGGTACATTTT
GTCGGCATTCTTTGAAGATTATAAAATTCGAGCTATCGCCACTCTTATcg
cattttttgaaaacaaaaatttttgttttcaaaaaaagcgaTAAGATAGG
GGGTATCGCAAAAAATGCGataaaaaaaatgcaataacaaaaaaattgca
TGTTTTCACTGGCGATAAGAAAACATCCTATCGCATTTTATCATGCGCAC
TGTGGTTATCTCGTTCTTATCGCCAGATGAAAACCACGCTTTACTGCGTA
CGTACTACGTGGATCGTCCCTGATAGTGacgacgcgttctttagaaagtG
TACTTGTCTTGTAAAAGGTTTTCTAGgggaataaaaggagcttattttag
gcagtgTCTTCATGTTGAGTCAGATAAATTAAAGCTACTTTTTACGTAAC
GATATCCTGCGAACAagtgaaagatcgaaagttgtttcgatatgtgacct
cacattctattgcttttgtttttttatttaatgtattttcattttttcaa
aaccttgttCTAATCTTGTCGCCCTTGTTTTTACTTcatcagcatcatca
gaccttttaatcaaaacaaaacctttaacgacGACCCAAATCAaacagct
tgtaaaaactccagtgtgtcccattttcttctttgaACCATTTTTGCTAG
TTTTTGGTCTCATAGTTCTCTCTCGTTGGAATTTAAACCaagaaaaattt
cattccaTTTATCTTTTTAGATTTGGCCGCAAGAAAATGTCCCTTGCCCA
AAAACGAGACAGTGCCAAGCAAAAGAAAGAAGCTTTCCGTCGCAAACTCG
ATGCAGAGGACGAATAGATTTTTCTCTTGTTGTCAAAAGATGCAATTCTG
CAATAAAACTACctcgtttttaatttttgccttTATAGTAGGGGGGAATT
TGgtcgttttttttttaggtCGCTCGATTATTctggtcaaagcacttgtt
atacattttttggaaagctaaggggtaggggaatcaaaatttcaatgttt
ccaatttttttctgtacctaactcgagatattaacccttgaaaaccgtgt
ttttcagccagaaacagctgtttcgTCCAGTTTtagcgctttttgaagct
caatatctcgagttaggtactgaaatcacctatacttgcaatatatctct
aatcataattttttgagagctttccaaaaatatacaacaggtctcaattt
tcattaatttttaactctatgatttttgcctgagaccgtcatatttgtcc
gaaaatcacaccaaagtgtccgaaaaaaattggaaacattgaaATTCGGA
CTCCTCATCAAgaccagtggtaatagggggagaaactatgaacatatttt
aaATTTACGActcgatggatgtaaaatttgtgatttttgtgaaatatttc
aagatttccgatattgcaaagtccaaactaaaatttagaaattttttaaa
atgacaatttttatttaacaactcattcaaaaagtacgttcg
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00068485TCONS_00068485Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00068485-proteinTCONS_00068485-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_485supercontigscaffold_485:177468..180959 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
359.59	361.73	347.95	362.57	377.99	312.91	431.83	466.59	462.65	449.86	580.73	604.91	788.16	823.95	781.46	820.5	774.89	816.85	398.89	403.34	669.36	718.56	562.38	515.66	608.92	699.22	674.14	687.75	484.42	489.16