XLOC_042397 (gene) - C. hemisphaerica

Overview
NameXLOC_042397
Unique NameXLOC_042397
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_477:158784..166918+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_042397 ID=XLOC_042397|Name=XLOC_042397|organism=Clytia hemisphaerica|type=gene|length=8135bp|location=Sequence derived from alignment at scaffold_477:158784..166918+ (Clytia hemisphaerica)
GAACAATGtccatttttgtccatttccagATTTCACCAAATTACATGTTC ATTTCACAAGCAGTATATAAGAGGTTCATACGTGGATCAACAATCATGAA GGTTTTGGCAACGGCAACTGTACTTTTGGTTGTCTTTGTACTGCACAGTC AAATGAACAATGCTGAAGCAGAGACATTAGGCAAAAGCTCTGGCGGTGGA AGTAAAAAGAAGGGACCTAAAGTTACACATATAGTGAGTTattaaagttt gaatttttaaggaaaagcttGGCCTACTCCCTTCTGAGATCCCTAAAAGT AGGAATTTAGTCAAAAGCACGAATCAGTGAATCCTCCCCGGCTCAATCTA CCTGTTCATTAAATTGCGGTTCTGAAATAACCTCTTTTCTTCTTTGACTA CAACTTTTTTTGTTAGTTATTCTTCCTTTTTAGCagttttatgttttgtt ttgatttatgcTTGCTTAAACTGATTGATTGAccctttttttgtgaaaat ttttctcAACTAAGTGCATTAGTTATCCCATTGGTTGAAACCTTGTAATA GATGGGCAGCCTGGCCTGCTGCCCCAAAACTTATAATCTTCATAAAAAAT TACTCTTAACCAAGTGCATTAGTTATCCCATTGGTTGAAACCTTGTAATG GATGGGCAGCCTGGCCTGCTGCCCCAAAACTTGTAATCTTCTTGTAATTG TAAATTTTAAGTTATGCAggcaaatattttgatttcatttgttttctgac tccatcttttcaaatattattCATCGTTCCAGGTattttttgatatgaaa attgGGAATAAAGAAATAGGACGTATCAGAATTGGTTTATTTGGAAAAAC TGTGCCCAAGACTGTTGATAATTTTGCACAATTAGCAACTGGAGAGGTGA ATATACAAACGTATTTTTCAACAATCTTTCTAGCATTTTACTAGATTTTC AGTCCTTGTAATTTCAGATTGTTTGGACAATATCTCTATACTGATTGTct ggaaatatttaattttcaatttcattgattttataGCAGCTTTTCTTGAA TCCATTCAATGAAAGTTAAAGGCTtcaatgaatttttaaaattagatatt tattttattcataGAAAGGCTTTGGATTTAAAGGCAGCAAGTTTCATCGT GTCATCAAAGACTTTATGATTCAAGGTTTGTATGTTAAAACTTATAATAA TCTCTCTAAAAGCTTCTTCTCCATCTTATTTTTAGTGTAATTGTgaagtt tgttgtgaaagttgataaaatatcgaccggataaaatatcctgtttttca agaagcGAGCGAgcgattcttttggcaaaagcgcgggaaaaaagctgata tgcggagtgataaaatcgatttttacccttttttagcctcgtttccattc agactttcgtcgtcgtgtgcaactgtcttaagtcccaatatggagaatta tcgcctgtacccgactgtctgttggNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNTGGGAAACGTCgctcggttcggaagcgtattgttgatcgg accatactgccttttaacagtcaaaacaaagatggcggcaaaaataaaca actggttgctaccgctctttcgctatttttctttggtttttatgctttaa tgagttgaattgaatcatgatttttgtatgattgttacaagaaatggttg atgatgaagttttcttattattccttcctgaatttgatgtttcgtttggt tGGGCATGAGAGATTGATGCAATCTCTTCTTGAAAAACCTTAAGTTTtga ttatgttttttttatctcgTATTTGTGTATgtttatttattcaatttttt gtaaagAGCAGGGCAGCTTGCACTTACAGTACTCTTAGGCCTAGACCTAT CATTACTGACCCCTTGAAATTAGGCGTTCTATGAAACGACAGCTAACTTA ATGGATTAAAAAGGGTCATAAATTAATTCTGTTAAAATATAtgttatcat tgttttttgCACGTTTCCTGTCATAagactttttagattttttagaaaac agTACTGTATGGGTCTTTTCAGATGATATATGCTGCCCTATTGGCTGGAT GTATATATAAacaattaatttctttttcgattttcactAACAGGTGGTGA TTTTACACGTGGTGATGGTACAGGAGGTATGATGAATAAATTTATTTCAG CTTCTTCCAAATACATGAATATCTCTGATTTGATTACCACGTGGTAGAAA GTCGAGCGActgtcaaaataaaaatgtcttAGGAGCCATTTTCTGTAAGG CAGGTGAtagtagaaaaatttaaattcctccatttttggatatttggtaG ACAATAGTGAAAAACTCAGAATCCCAGAATTTCAGGTcccaaaatccata atggcggatttacaaccaatcaaaaatttcactttttggacctacctgtg gaggtcctataaattaacctttgtccgtccgttcgtctgtccgtctgtcc gtctgttaccagcttttctcgagattggctcattagttttttctgatttt tggcacaatgatgcaaaatggtaatgtccaaaatgtgacggagcccgatt ttcgaaaaaaaatcatttccggcagaaaatgccggaaatatgccggaaaa acgggttttttagcattttctcgagatttcatcattagttttttcagatt ttttgcacaaagatgcgtattagcaatgcccaaaacatggcagagtctga tttttgaggaaaaatcttttccggtcgaaaatgccggaaataagccggaa atcgccgtttttgcagattttcattggactttttccttatatttcgttgt tttttcacacaaaaacattattaatagcatgtccacgatcaagcatggtt aaattttcgataaaactgatttttgcagccggaactttctaaaaatcgcc ggaacagccgattttcgccggaaaaacggtatttcttgaatttctcgagc tgtactttatatttttttatgaaattttgcacactgatgtaaaatgacaa tacctaaaaagtgacggagcccgattttcgaaaaacattcttttccggcc gaaaatcccggaaatatgccggaaaaactgtttttttttggcattttctc gagatttatcattagttttttctggattttcattgggctttttccttata atcggttattttttcattcaaaaacattattaatagcaatgcccaccatc aagcatgtttcaattttcaataaaattgatttttgaagccggaactattt aaaaatcgNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNcggagcctgattttcgaaaaacattttttccg gccaaaaatgccggaaatatgccggaaaaaccggtttttttacattttct cgaattttcatctttagtcttttctgatttttttgcagaaagatgcgtat tcgcaatgctcaaaacatggctgagttcgatttttgagaatttttttttt ccggttgaaaatggctgaaatcgccgtttttgcagattttcattagattt ttttccttgtaaatctatgtttttgacacaaaaacattattgataacaat gctcaccatcaagcatgattcaattgtcaataaaactgatttttgagacc agaactttctatttatttcttCCCTACAACCTTCCCTCTCCccttatcaa caatcaatgatgaatttattgcgttatgcattttcgctaaacgctatatt ttctgactgatttttttctcctcgcattgctatctaactttcatcatcag gtagatccattcagcatctagcttgttttgcTCGTTTTCTTTGTTACAAC TTTAAAAGGCATTTTTTCAAGTTGTAACTGAGATCACATGggattttatt aattttcttgaAGTACCCAATTAGTGCTTCCAAATAACCCATAAAAACCC ATGTGACCTTAAACGcgaattccataatggcggcttAAAAACGCCCCAAA ATCCATTTCAGCCATCTTTTAAGGTGCCATTACTCAGCCCAGGActtttt tgggccaaatttcTTTGTGGAAATGTGTTAAGCAACTTTATGACAGCAGA TTTAAGCAATTTTGATGTATTTCTTTGCCAAGATGAAGATGGTGAGATAA AGAAGAAATCTTATTTTACGGCTGCATTCAGGAGTGACCAAGACTATCTA TGACTCTGGTCACAATGTGAAGTGTCATtccttttttgccaaaataatcA CACTGTCCCTCTCTAAATCTCATTGGGAGGACTTTTTGGCAAAAGTCTCT AATCCACAGTCCTGTTGATTTGCTGAGGAGCTCAAAGGCATCAATTTTAG CTTTACAAGTCCTGTTGCACATGTCTCATTACGTGTTGCAGCCATTTGAA TTTAGCATTTCTGGCCATCTTGATTTCATACTGCAGTTCCTGCTTACCAG GCATTTGAGATCTGGAAAGTTCATCAGAGATCAAATCTATTGTGCTAAAT AGCTCTTCACATTGCTGACACGACTCATTGTGCTCTTCACACCGTTGATG GTTGGAGGTGAGAtggtttttgaaactttaaagcTGTAAAACTTTAAATC CCTTGATTAGACGATAACCATGAATCTCATTGTAACTTTTTCAGTTAAAG ATCATGAACTGAGACTTACCTAGGTTGATAAAAGAAGTCTTTTttgcgtc aaaattgaaaaatatcactTTATTGAATGATTTTCTTGAAGCCTCTGTAC GAAATTCActgaaaaatgacgaaaatcATGGAATCTTGGATTTATTCAAC TCAAATGAATTGTTTGGAATAAATACTAAGTCTATTTtggaaatattgat aaaatattttgaaagaaaattgatttccaagctgaaaaccggttttccag cTTGAAAACAAGCCTAAAAGACGTACTTTTTTATCGGACTTAagaaaact ttctttcctttttttctctttcataagcatgattttttcagatttgcGAC TAATTTCGGgcaaaaccaaaaattggatCTGATAGGCAGCCTAGACTATG TATTTTCAGAAAGCGAAATAAAACCCATGTGATCTATAAGCATAGATCAC ATGGGTTTTATTTCGCTTTCTGAAAATACATAGTCTAGGCTATCAGatcc aatttttggttttgcCCGAAATTAGTcgcaaatctgaaaaatttgagCCG GATTTGCTACTTTTTGACTTTGGAGCCGCCTTTCAGGACTGCTAGAGCCC AGtctactttaaatttttttttcaaaattgcttaaatcTGCTGTCATAAA GTTGCTTaaatttggcccaaaaaagTCCTGGGCTGAGTAATGGCACCTTA AAAGATGGCTGAAATGGATTTTAGAGCGTTTTTAAGCCGCCATTGTGGAA TTTGCGTTTATAAGGTCATATGggtttttttgggttttttggaAGTACTG ATTGGGTACTtcaagaaaattaataaaaacccATGTGATCTTAGTTGCAA CTTGTATAAATGCCTCTTAAAGTTGTAACAAAGAAAAcgagcaaaaaaag tgaaatttttgattGGTTGTAAATCCGCCATCATGGATTTTGGGGACCTG AAATTTTGGGATTCTGAGTATTGCACTTTTGTCtaccaaatatccaaaaa tggaggaattcaaatttttctaccATCAAAATTGTCCAAAACTGCCTGGt tcttacagaaaatggctcttaataaTATTCGCTTCGttgatattattatt attgataatttgaaacttttttaacaaattaattttaatgaaaatccgTA AAAAAAGTAGGTGAACTATAATCAAATATCTTCACACCCTGGCATCCAAG GAAAGTTTCAGTTTTCAAATACTGGGGCACCCTCTTCCCAGGCTTTTCCC CCCTGATATATGATCCGACGTTGTTACTCACATCGGATTTACTTCATTCT GTTTATCACAGGACGAAGCATCTATGGTGATAAATTTCCCGATGAAAACT TCAAATTGAAGCATTATGGTCCAGGATATGTTTCAATGGCAAATGCTGGC AAAGACACCAATGGATCCCAATTCTTTATCACCACTGTCAAAACTGGGTG GCTTGATGGAAAGCATGTCGTATTTGGTAAAATCCTTGGTGGAATGGTAT GTTTAGAATTGAATCATTTTagccctattcgtactaggggggagCTTTTT CAGTGGTGAAACTAATGTGAACAACTCCTGAATCGCGAAAACTCTACTAT AGCTTTGGACATggaattttctgtaaattcccaagttttatttagcttca aattAAAATGGTACTAAAGTGGTGGTGAAGGAAAAGCTCCCCCTTTAGTT CTGAATCgaccctaaaagcctagtatgaataggatTACGGCTGTTCTAAA TCCACTGGCCATAAAACAGTCCAAAGATCCTTAGCGAATAGATATAATAG AATTGATAGCATCGTATTCGATTGAAATCCAAAATCGATTATAATCGATT GTATTTCATAAACAATCGattacacgtttcttttttaagaaactagtttt accaagcagcctcaatgtttcttaagaaattgaccttttgagccttaaaa tgtttcttacatgtttctaaactttttgacataatcagcctatttttcat gcaaagaaaaaacatttgttttgattggaaggttcttaaaaaaaaaacaa attaaaaaatgttattttctcattctcagcctcagcatgtttcttggatg tttcttagtttttagacattcgtgtttcttaaaagtgtgtttcttaaaaa aaacaacgtgtaattGTTTATTGCCATCAATGATCCCAACCAATATTTAG AATCTGTTAAAAATTTATACACTCTATTAGCAACTGATAACACTTTCGTA AAAGATGACTGATTGAGTGCCAAGATTATGAATTTTGATCTGAACGGTAC TCCTTTGCATGCACGGGGCAGAGGATCAAGAGTACTTAAAGTCATTAAAG TAGAgactttctttttgaatttgcGAGATAATTCAAATTTGCGTCCGGAA TAGGTTTTTCGTTAGTATTAGAAAGTTTGATTACAGTAAATTAGCTGTTA CAatttaatttaactgaaaagTTGCTGAAATCACTTTCAGTTAGCGCACG TACACAAAACTGTTAGTAGCAGTAGTTGTAGCAGTCAGAGGAAATCCAAA ATCAGATGTTTTTCGACTGACTGGACAGAGAGAAAGACAAGAAAGTTTCA TGATTCGCTAAAAGgtaaattcattttgcttataGTTTATGCTAACACAT AATGCTACATTTCTGAGCatcattttgtataaaaattgctttgcaaaatt gtttttcaattttatttttttcaggacgTTGTTCGGATAATTGAAAACAC TCCTGTTGACGGAAGCACTCCAAAAGAAGAAGTCATTGTTCACGATTCAG GGCTCGAAACACTCGATAAACCTTTCAATGTAGAGAAAGAGGGATAAGTG CCTCGAAAAGGTTTCTTTATTATACACGTTCTTTT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00067883TCONS_00067883Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00067883-proteinTCONS_00067883-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_477supercontigscaffold_477:158784..166918 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
190.46 202.25 265.97 275.44 117.87 98.18 179.37 184.18 185.33 177.02 169.89 190.05 128.96 131.63 130.49 145.05 142.06 139.32 78.82 95.93 72.64 72.42 102.4 94.63 101.95 106.46 108.07 84.7 132.64 110.09