XLOC_042393 (gene) - C. hemisphaerica

Overview
NameXLOC_042393
Unique NameXLOC_042393
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_477:94255..100841+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_042393 ID=XLOC_042393|Name=XLOC_042393|organism=Clytia hemisphaerica|type=gene|length=6587bp|location=Sequence derived from alignment at scaffold_477:94255..100841+ (Clytia hemisphaerica)
NNATCCAATGATCATTTTCAACGATACTTTCCGACGCATGCGCATAAAGA AGAGATGGCAAACGAAAGAACCAAACAAACGGATTTCTTCTATCTCATTG GAAGTGAGCAAACCAACGAATCCAAACGAGCTAGAACGACAGGTATCTTT TCAAGCTGTCACATAAGGTTGTTTTAACGTCAATTTAAAGTTGTATGAAA GTTGTCAAAAGACTGACCAAATTCGAGAAAATTCGAAATTCCTTTTCGAC GAACACTCCATTAAGCTTTATGGGATCGTGATGAAAtcttaatgttttgt ttttttctaaatccACTTTTTTCAATCATCTCTGTATAAATTTCCATACC AGCTTCGGTCAGCTCTGCAGATTCAGCTTTGGGAACACCATCACCGTGGC TTCAATCACCCCAAGCATATTCACCACCTTTGTCTTTGAATGCCGATATA GAAAGCCCACCAGTGCCACAGGAGGCGCAAGCACCATCGCAGAATGCAGG TACTTAATTCTCTTTCATAATACCAAGACTATGGACATATATCCATGATG TTTATTTATGAGTACCATAAGTAGAGTATTTTGCTACACAACGTACATTG AAGTTTGCCCAATCCCTAACATGTacactttaatttttttgctacttgtg atattcatgacgtaatgttttgaaCGAAGGCACCCGGAATATCCCAGGAG TTTGtcactagttttattgtttaaattcaaaacttgTGTCAAAAACCCGG TCCTTTTAGGTGCTTtcgtataaaacattacatcataaatatcatgaatt gatatTCAGGTGACGTTGCACATTTCTCGAACATCATTGCAGAACGTATT CAAACCGAAACGTTAGAAGTTGGTGAAATTAAAGGGCAAGTCTTCACTAC TCCTCATCACGACattggctaccattttgaattgaatgatgatgaagaaa aatTCAATGAAGGTATATATGTGCAAACAATAATAATCCCTGGCTTACTg ccctggtggaactttttccaaagCGGGGAAATAAGTTCTATCGAAATCCT TATGGGAATGGAGATTCAATCGTCCCAAGCTAAAAAAAgctagtggggat ggttttggagtgaaaTCTTTcacaatgaatttcgaatggggatgaaatga gaattaatttctcagtggggctgaagtTGTAGGGTATTGTTCCCATTATA GGCCTTATAGGGCAAAACTTTAACCAAATTTCACATTAGGGTGAGGGTCC CACCGTGTCTgggacacaggggtgtatacaACATTGGGATCAACTTCGAT GTCTAGGATATAGTAGAAAGACCCTTCTAGACCCTTCAGTTCAACGACTC ATAAATAAGtctccaaaattcaaaatgtttttaactcgAACGAAATTGTC TTTCCCGTGTGCGTTCTCTACTGCATCCGTATTTGAGGGCTTTGTGTCAA CTTCAAACTTCAAATTCTCGTGGCTGGTTAgttcagtcggtagagcattc accTAACAATCCAAAATCcaaaggttgtgggttcgatccccggtcaccgc taACTCAGTGAATGAGTAGCTtggattgggtaatctgatctaggtgGCAA gctactgggagctgagaggaGGTGCGGCGCTCCACCTCCCAGGTCTAGGA CACTTAGAAAGGGGTTAGACTCCCTCTGCTGATAGCCGACAGAtgattta cttacttacttaaccATTTTAGGGGAAGTTGTTGGTCTGTTACCAGATGG TGACGACAAAGATAAAGGAACTCAACGTTTACGTGTTGTGAAACTAACCA GTGAAACTGCAAGCCAATGTAATCTCAAAGGTGTTATCACCAATTCACCG TACATTGAAGCTTACTGCCCCAAGAAAGATTGTAAGTGTTTTTTTTGAAT ATAAGTTGCTCAGTGAACATAATGAGCCTAATATTCCATACTATGAGTAT CAAAAACACACAACTGGTAAGCTTCAAGTCAGGATTCTGTTTGTATCGAA ATGATgtcgaaacaaaagaaaatatatcattattagaataattgaaattg ACGATGCAATAGTCTGACTTTtctgtgtttttatttttttcttcgatgCT CATTTCCAATTTACATTaattgcaaccaatcagctgctgTGAGACTGACT TAATGTCAATATACCCTACAGGGATAATTTTAGGTCGAAATATCGGTAAA TACTAAATTCAGGATTGATTTCGCCTCTACAACCTTCGCCTTCTCGttcg ctagatttaaaaaacatGCAAAAATTTAGACCAACAGTAGGTCGTTATCA GAGTGCGGTGGTCCTGAATACCCATGATGCCTTTCGACCGTAAAATGact gaattcatgatatgcaccgctggagagtcttctgagaacttttaaaattt tccacccaatacatcacttttaaacaatagaaaaagtgacgtattgggtg aaaaaaaaacaacagaaaaatttcataatttcttgaagtcattgcagtag TGCATATCATGAAATAGACCTCCTATAAATCTATCTCCAGCCAACAAGCG AACAATAATCATCTGTATGTTGGGTATTGTACCAGTACAAGTCATTGGCT CAGTCCGCGCCAGTGAATTCTTGTATGCAGCTCCTGGACATCCAGGCTTA GCAATGAGTGGATATCATTTGAGAAGAGAAGATAAGAAAGAAGCAAACTT GGTTGGGATTGCTGTCAATTCTGTTTTGACCAAGAATGAATTGTCGGTag gttcatttaaaaaaataccatATCGAAGCCTTTCAAACAAGGCCCACTCC ATGAAAGTTGACAGTGGGGGAGGGCAATgaatatagagtctaaggaggag caactaaaaaaaatttactttgcaATATCACTGTCCTCCAAaatacaacg ttttttcaacatttatctaatgttcacaacgtccaaataacgttagataG TGTGCCAAGTGGGTACTGTGACCACcacagttaagctttttttcccgAAA TTCAACCTGTGGAGACGGACTATGTTCATCTTATCATTTTTGTTTACTCT CTTTGCCAGGTTGGTGTAGTGGAAGCAGGAGTATCATTAATGCAAGCAGC TTCACAACATTTAGTCAATGAAAAATTGAGAGAGATGGAGAGTGGCTTGG AACACAAGATTTTAACTGTTAAGAAATCGGCAATTCGGTGGAGAAGGGGT AATcatggtttgattttttttgggcTCATAATAAAAAACTTCTACAGTCC TAGGCAAAACCTCCAAACATTTTGGTCCAATTATTTCCCAGTTTTCAAGT CAGAGATGTGAAATGGTTCTTACactaaaatttctatttttaaagtactg gaaacttgaaatttcgactttggaaaatagccggataaaattattttgag gttttgctaTTGGAACATGAAAGAATATGTAAGCCAAAGTTCTCAAACCA TTTAGTTATCCCTTTAACAATTTTTGGAgagattttccaattttcagtcc cagctagcacacaaaaacgctgtttcaacgtttatctaatggcTCTCTAA TGCTCATTACGCCCATAAAaggttagatgaacgttgaaacaacgttgtgt gaaTTTTAACGCTCAAGGGGCTGACAAAATATCAgcttattttcatcaaa atttatggtTTTTTCAATGGTAGCTAATCTCGTTCCAAAGCTATAAATCA TGTTATCGGAGGATCTCAAAAAAGTCAGCCTTTTGGGGCTCTGTAactga atttttctttccattCATTTTTCAGTGTTCACTTGGTTATCTGTCATTTT TGTCATCTTCTTGATCTTGGCTAGTGCCTACGCCTTCCAACTGTATTGGC CTGGTTCTGCATATCGAAAATACAAATGCATGCTTGGGCACAAGAAGCCC CTCTACAAAGCTCAAGTCATTTATGTACCCTACGCTAAGCAAGACATAGT AATAACATTGagttgaatacacgttttttttattttaagaaacacacttt aaagaaacatgaggctcagaatgcctaaaaactaagaaacatctaagaaa catgctgaggctgagaatgagaaaataacatttttcatttcgtttttttt aagaactttccaatcaaaacaaacgtttttttttctttgcttgaaaaata gtctgattatgtcaaaaagtttagaaacatgtaagaaacatttaaggctc aaaaggccgatttcttaagaaacattgaggctgcttggtagaacaagttt cttaaaaaaaaaaaaaacgtgtaaccatttttctttatcatttttctGAC CAACTATCGAAGTCAGAACTGGTGTCTGATGCTTTGAGTTTAAAACCTGA TGGGTTAGAGAGGAATGTTCTAACCTTTATCTCAAAGCAAGTAAAAGTGA AGTCTTAAGATTTGTGCTGCCTTTGGAATGACAGATTGAATTGAGCACCT TTCACGCGGCACATTTCCCGAAAAATgtcgatagattttactttcaattc aGTATTTGCTTGTAAAACGCTTATCAGGCTTTTCATGGTGGGAAATAAGt agttttatctaattttttttttcggggaTTTCAACTTGATGGTCCAGTTA CCCTTTTCTACTTTCAACACCCCCGCCCCATCCTCGAGGCAGGAAGTGGA AAACAGTTTTTAGTTGATAGTTCaaaaaagaaactcaaaaagttacattt aCTAAAGTAGTACATTTTGCTAACATTTTCAGATGAggtggagtttttat aagatactttaataattggtcatttgaagtaataaaaatgacccgttctt tagaaaaagtaaaaaatttgttttattactggttaatggccaaccaaatc aaaaaagaaaaaaactccatctcgtcccattTTACTGTATTTAGCTCATT ACAACCAACGGCATCGAATTCGAATATGACGAACTCATAAAAAAGATAAG AGAGCACAAAGGGGCCACGTACCGACTTCTTGCACCAATGGTTGGTGGTA TCAAAATTGGAAGTAAGCATATTATCATGTTATCTTCTTTGAAATGTTAT CAAAATATGAACCGTTTTTTATAAAGTTAGTCATGttcaaaaagcttaaa attcgCTTCTGTTCGAAGTGCGATGGCTGGGAAATATTAGTCATCAAACT TTTTAGAAACAGTCCCCTAGATTTTTAGACGTAACTTTTTCCTGTTCATT GTCATAAAACTTTAAGTACTTTTTAGTTTAGCTAAATTTGGagagctcct gaaataatagtgCCTTTATTTGGcataaattcctaacttttatttaactt caaaaaaaacaaaaaaacatttgacaCCTAAAAGTTTTCACACCTTGACA TCTAAAAGTTTTCACACCTTGACAATGATGACATTTCCGACAGaataagg tgtcacaaaaattgacacatttcTGATACAAATTTATtctttatgtcaaa tatattgtttaaaccgtaatttattgaatatttaggataaaaaaaTGTAC ATGCTGAAGATCTGAAACCCTCCGATTCTCTCTTGAAAATGAATTAATCT TTCTCATCTTATTAGAACCCAGATTTTTTCTTGGCTTTAATCGATGTGCG TATGGGAACAGTTTTGCATACGCTACGATGGACGGGACAACAGTATACAG TGGTGTGACCATGTTTGCAGTTGATGAAACTTGTACTTACGCATTCCTCT ACAATGGAGTTTATGATACTTGGACACGATTTAACTCTGCTGGAAATGTT GAATTTCCAGGTTCTGTCAGATGTGGTCAAAATGCGACACTTGACTTCCC AGAAGCCAATGGTAGACGGGATATTAAACTTGAAGCACAAGACCCCTaat gaaattgtattttaagcgtACGGTtgactctctcttattcgatcttcaag ggatcaaaaattttcttcgaattagagaacaattcgaattacagaaagta ttttatactaatttCAAGCAGAGGGGACAaacattttagttcgaattata gaaagattagAATAGTAGAGGCTCGGATTAGAGAGAATTGACTGTAAATA TTTTACAATGTGATACAgcaaaaaagacaacaaaaatGACACCTGGAATA ATTTCTTAAGTcacaaaaacgaaattttacatCAAATATGCTGTTCTTAT TCTTGTGCAGGGGTTGCTGTCATAATGTTGTGTATATATATTGGTGTAAA TATTTTCAgataatgataattttttttacatattcaaAGACTTTTGTGCC ATGAAACTGGATTATCAAAATGTTTTACGTAATGCTATAAATATGTATAA TTATATTTCCCTTGAATTCAAAATCATATGTTTGAATGATTATGATTTTA TGATTCTTGTCGGTTAATTTCCGATATATGCCCTATTTTTAGACCTACTC CGGAGGGACGTtagttcgtctgttaccagcttttctcgggcgggattggc tcattagttttttctcatcttttgcacaatgatgcaaaattgtTTAAGCT TTATTGTCAACTTTTCCtttgttttaaataaaagacaagttgcgatttgc atactttttgatcacgttaccctTTTCGGCTCTTGGG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00067875TCONS_00067875Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00067875-proteinTCONS_00067875-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_477supercontigscaffold_477:94255..100841 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.42 0.32 0.31 0.17 1.59 0.83 1.8 2.33 4.79 7.53 3.02 2.94 15.29 7.18 10.37 14.62 9.82 8.79 23.66 20.98 3.75 3.84 12.42 18.5 29.34 17.88 12.29 13.45 7.18 4.37