XLOC_041255 (gene) - C. hemisphaerica

Overview
NameXLOC_041255
Unique NameXLOC_041255
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_447:354048..359329+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_041255 ID=XLOC_041255|Name=XLOC_041255|organism=Clytia hemisphaerica|type=gene|length=5282bp|location=Sequence derived from alignment at scaffold_447:354048..359329+ (Clytia hemisphaerica)
CTTTCAACTGCATTCTATGTCACAATTTTGATGATATTGATTGGAGTAAC TTGTAAGTAGAAAAATTCACTATTTATAACATGAACaggcttaaaaaatt gaatttgaccTTTGTACTGTAagtacaaaaaaaatataaatataatcATG AATGCAAATTTAAACTTTATATATACATTATGAACAAGTgtacaattttg ataaaaagtggattttttaaagataaataAATACTAGAGGAACTGTGAAG GATATTCAATGTAAAAATTAGTTGTGTTGTATAATGCTTTAAANAAATAT ATACTAGGAACTGTGAAGGATATTCAATGTAAAAATTAGTTGTGTTGTTA TAATGCTTTAAAATcaataatatatatatattactCTTCAGGTTTATGTT TTCGCTTGCGTGTTGGAGGTTTTGGAACAGTTACCCGAACTTCTGGTGCA ACTCGGAGGAGATGCTGCTCGACCATGGTCTGTAATCGTTTTTCAGCAGG TTTGTGAGATGCATATGTTTTTCGAAGACTATTGAACTCTGGATGAATAC TCTCCGCACCTTGTTCGCCATACATACCAAGACCAATACGCCACTTTTTG ATGAActttagaatgtgacactcgaGCATATGAAGTTTGATTGTGATTGA TTGTTTAAAGTTATCACGGTAGTGCACAAAGAACTTTTTGATTGCTGTAT CTGATGAAAAAGACAAGGATCCTGGTAAGTGGAACTTATACTATACAAAT TTCCAATATTAATTCCCCTTTTTAAAATCACCAACCAAAGAGACATTATG GTTGGTACGGACAGAATTTTGAATGTTTAATTTAAAGCGGGTATTCAAAA ATAGACAATCATACTGGATAtcacaaaaaaaacatacctAGCTGCTGAAT TTTTTCATCATTGAAATAATCAGATGAGTTCATGAGTCGATGACAAACAC CATAATTATCCATCAATTCTTTAAATCTCTTGCTGATATCACATGCACGT ATGTGGGCAGGGGTGTCGATCAAACCAAATTCATCGTAAACTAGTTTAGG AATGCTGTGACATAGCTTGcgaatgtttttttcctgaaagATAGAAGTTT TAAACATTGTAAGtggattaaattaaatttggtcTTACTTCACATCATGA ATTTTTTAGGTACTTGGTAGGATATGGAAATTAGCTccaagcaaaatttt tgatattgcTCCACAGTAATTATATCTAAATTgtatatttcatgaaaaaa gagCATTTTTACGGTCTTTcgcatttttaaaattttcaaaaggattTTTA TCAATGTATCTTGGACTTTNATTTTTACGGTCTTTTgcatttataaaatt ttcaaaaggattTTTATCAATGTATCTTGGACTTTTGATACGTACGTGCA ACATTTTATGAACATCGTTTCCTATAAATGATCTTCCGTGATATGCCTGT CTTTGAACACCGACCGATTGTAGAACCTCGTCAAGTTTTCTGTAGCAAGG ACCACAACTGGCATTGATTGTCAATTCATTCTCTAACTCGTCAATCTCTG CAagctgaaaagaaagttaaaatatACCTTTTTGGAACTGGCTTTTttag tggttgaaaagaaaatcagaaaattgaatttcctaggaaataattctttt caattttgacctttttcggACCAACTTCATTTCCCTAGggcttttgaaga attttcagaACATTTTATCTCACTGGTTcaaatttcaaggtttttcggaa aataaaactgtgcaaaatgcaaaaattaattccccaaaaattgttttgtt ataATATAATTATAGCTTTTATTACCTTCTTACAGAGTACTTCATTCAAC ATGTCTATTCTTTCATTATAAATTGTTCTAATCCTCTCTTCTTCATCAGG GTTATTGCAAATATTTACTCTAATTGCTTATTGGACAAGACAAATTTTGT GATGACAATCTTGGGCGNCAAAAATTAATTCcccaaaaattgtttaaaat gttATAATATAATTATAGCTTTTATTACCTTCTTACAGAGTACTTCATTC AACATGTCTATTCTTTCATTATAAATTGTTCTAATCCTCTCTTCTTCATC AGGGTTATTGCAAATATTTACTCTAATTGCTTCTTGAACAAGACAAATTT TGTCATGACAATCTTGGGCATTAAATTCaagattttggattttcttaagG ATTtccacatttttcaaaacatcttcACGTGTGATTTCAGTATTCTCGTC TTTTTCTGCCAGGTCTCCAAGGATCTCCATGTCTAACAGTCTGCACTCAT CTTCAAgcatgttgaaaattttaagataaGTTCCAAGGCTGATGTGGAGT GCAGGAATGGCAAcctacaaaaaaagaaaataatacgtCTATCAATAAAC ATTGGTTGATCGGTTCCTGCGCTAATAAGTCCAGTCCCAcaaataataat tataaaagATCAGTCTTataatgaaaatagaattaTTTGGAATTCTATAC CTGATCAAGTGGAATATTTACAATAGGTTCATGAATAACATTGTCAAATT TCTTTGCGTTGCCAATGATCCCACCTGCCGCTTCAAATTCTTCTAATTTT GTTCGCAAGGTCTCAAGTGTTCGTTCTGTAATTAATTTTGATTGATCTGC AGgacatttttgaatttcagaGTAAGTTGCATTGCAAAACAAACAACATT GACGCCCTGAAAAAGGATATTAAATGATTAAACATTTATTGATACTTgct ttttcctttaaaattctgatttctttcatttagggaaaatattcataaaa taaACGACAATAActtttcaccaaaattaatGTTGGTACAATTTCTTACC ACTGGCTCCAGTGATTCCATaaattatgtttaaaaaaatatgaaaattta ggatcgaaaaaaaatttcacgtataaaattcaaaatgatctaattcttgt ttttatttaggTGTTGAATGAGCAtactgatgatgatgatgattttggtT TCAATACActcaaataaagaaaaatctggTAAGTCACCTCCATTCCATTT TCTGGATTTCATCTATTGTATCTTTGTAACGATCCATTGATAATTTGATG TTTACACGATAGTCCTTCGCCTCAAAAGTATTGAATACGATTGTATTCTT TCTGCTGTTAGGACAATCAGTATTGCAGCATTGGTAGGAGAATTTGAAGG AACCACCACCATGGTCACCTCCAATTTTTATGTGAAGCTCGTCTTTTATT GTTGGTTCTCGACGAATAATGATGTACTGTATGGAAGAAAagggaaataa aaaatataaattaaattgaaatagAATTAGCTAAAATCTTTATACTTTAG TATTTGTAAAACAAGTGATATTTTTGTACAGCCAAGGTGTACATACCTTA CAAGAGATTCAAGGTATGCAAACAAGTGTCCTTTCAGGTCATCAATGTAT GCCTATGCTGCTTCCAATTGTTCATATTTGCCTTTTAAAATATTCCCAGT CTNGGTGTACATACCTTACAAGAGATTCAAGGTATGCAAACAAGTGTCCT TTCAGGTCATCAATGTATGCCCATGCAGCTTCCAATTGTTCATATTTGCC TTTTAAAATATTCCCAGTCTTCTTGCATCTTTTTGGAAATTGGAAAGGGG CTAGCTTGCAAATCACTACAGCAGCTACTATTGTGTGCATAATCTCTCTC TGTTTGCGTTCCGATTCAAATGTTATTTTGCTTTCCCTCATCCACCTACA gtataaaagcaaaaaagatagaaaagttaattgttaaattgagaaaatat ttccagaatttttcaattcaacaaTTTGAAACCTTTATGCACCCATGGGG TAATCTGCTCTATGTTCTAAACATGACTTTAAAAACAGGGATACTGAAAT AATGTGTATATATGCTAAAGTAAACTGACAGATTTCTATCCTGGTTGTTT AATGTTACTGATATATAATGCTAATAAACTGGGAAATTCTGTAACCTTGC TAATTTCCTCAGTGTTGCCCATGGTATTTCTAAATCAGCCTTCATAGCAA CAATTGTTTTTGCATCAAAAACTCTGTTACCAATGATCTCTTTTTGTTCA AATAACGTTAACGAATTGACAAAATGTGCTGTCTGATTTGTGCTGTCTCC ATTGCTGACAAGACTCAGTAAAGTTTTAATTGCTGCATTTCCAAACTGGA TTGCACGACGACAAACATTCTTCTTGATTGCTACCGGGTTGATACAAGAA CAAGAggcttaaaaagaaaacaataatcTATATTATACAACAATCCacat tgaataaattttttgactttatCTTAATAAGCTTGAAATTTTGTCCTCAT TTATGTCATGGCATGACAAAAATTTTGCAATCAATAGAACTTAAATTATC AAACACATTCTCTTTTTTAGATTGCTTACCCTTGACCCATCAGTGTTGAA TGATATTGACTTGTCACATGATTGGGATAGTTTGGTTTTAATTATGTGTA CTGCAGCTTCTTCATAATCTCGTGGAACCTTATCACCGGTAGTTAACGAG AATACATCCTTCAGTTTGATTTCAGTAGTTGATGTGGCTGGTTTTAATCT GTTTATGATATCAATTGTTTGTTGAGAAAATATGACACCTGATGGGGAGA CCAATGAAGTACATGATTGACATGGACATTTGCATTTTTCAAGTCCATGA CCTTCAATGTGACTCAGTAGACACATCAAACATACTACGTGCTGACATGA TGATACCAAAACTGGTTTATCAAAGAGTTTTTGACAAACTGGACACTTAA CCAAATCTGTGAAGTCATCTTGAAGAAAGGAAGTCAAAGGAATATCGTTG TTGTCTGTTTCTTTCAGAGAATCTGGAATCTGCTGGATCAAAGCAAGTAT GTTGTTACGTGTCCATATCGTGGGAACTGGCGATTTTGATGGCCGTCCAC CCTGCTTTTTGGTCTTCTTTGGGCGACCTGGACTATTTCGTGAAGTATCA GCTCTTGAGCAAACCCAACAACCATCATCAGAGTGCAAGGGCCAATTTAT GACTTGATGTTTTACCGTAGAACCCCGCTTTTTGATGGCATTCAGCTGGG CACAGCACTTGAGGCATATATATTTTGGATGTTTACGATCCTCATCTTTT CTAGTTTTAAGGTAGAAACATTCCAAAATATCTTCGGATTTGCTATCCAC CAAAACTCCAtcattaagaatattttcccCACAAATTCTACACAgtcttt gtaaattttcttgATGAGGATCCACCATTTTT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00065856TCONS_00065856Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_447supercontigscaffold_447:354048..359329 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.19 0.14 0.2 0.05 0.93 0 0.06 1.25 0.78 0 0.13 0.32 0.05 0 0.17 0 0.4 0 0.45 0.28 0.05 0.06 0.28 0 0.44 0 0.32 0.4 0.75 0.24