XLOC_041089 (gene) - C. hemisphaerica

Overview
NameXLOC_041089
Unique NameXLOC_041089
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_440:366670..375993+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_041089 ID=XLOC_041089|Name=XLOC_041089|organism=Clytia hemisphaerica|type=gene|length=9324bp|location=Sequence derived from alignment at scaffold_440:366670..375993+ (Clytia hemisphaerica)
cGTCAAAGTGCTTACCTTCTCTTTCGCGGACCAAGATTAACTGATCTTCC
ATGAAAATGATTAACTGATCTTCCTATAAATAGATCGTGCCCAACTGAAT
GACTAACTAACTTTATGGTTTTATTACGTATTTTTCGGTTTGGAAATGAC
CAGTTAATTCATCCTCCGGGAAAGAGAATTTTAATCACTTTGACggtaat
aaaaagaaatatacaaaaattggAAGAAGAAGAACATTAGAAAAACTACA
GTTCACCAACACTGAAATCATCACGTCCGAAGAACAACAAATATATTGTA
ATCAAGAAATTAACACCATACCCTAACACACCAAACGTATAAAATCCCAC
GTGTTGGAATAAAAATCCGCCTATGGTGGGCGCCACCGATCTAATACTGG
AATGGGTGCAAAGTGTCACGCCCAGGGCGGATCCTGTCTCCTCTTTCTTC
ACGACTTTTGTTATGATAGACGTTGTCACGATATGTAGTAAAGAACCGCC
AACAGTCAAAGGTATACACGTCAAACAAAACACATATATACTTTCCGCGA
TAATGAGATATAAGAATCCAACAGCCATGGTAATAGTTGAGATAATAATT
AATGGGCCGTCGCTCACGTGACGGCAGAATAAACCAATCAGGTAGCCTTG
TGTGATCATGCCGACCACTCCAAGATAGGATAACACCATACCGTTCTCCT
TCGGTGACAGTTTATAATAATCCATAAGGAGGAGTGTAAACATGGCGGAT
AAAACAGAGAATGGAAAAGCCGTAATGATTTTGATAGTCAGTAAGTAAAT
CATATGTTTTCGTTTCGTTACAGCTACTAATTCACCGATTCCTAAGAAgg
atttctttttctcttcttctttacattttattttctcTAACGATTCTTCG
TTTTTACGTTTAGGCTCTAAATGTTCACGAATGTGTGTCGTGTCTCGTGG
AATCAAGGCTAAAGTTACCAATATACATAAAACGTCTACGACTATAGCAA
CGAAGAATGGAATTCGATTTCCAAAGTGTGACGTAATGAATCCACCAATG
CCGGAACCGACAATCATACCCAGTCCACTGGAAACGCCCAATTTTCCCAT
CATGTCCGCCCGTCCTTCAGGGTAAGTGATATCACTGATTATAATATACA
TACTTTGTAAAGGATGAGCTGCTATTCTCGGCACCTTAGCTAAGAAGAGC
ATTGGTATTGTCCGAGCCACGCCCAACATAAAGTAACTGATCATAAGCAT
TACAAAAGCGATTATAAGCGTTAAACGCCCTCCATAGATATCTGACGCCC
AACCACAAATGGGTCCGCCAATCAGATTCATGATAGCATGAAATGATATT
GTATAACCATATACTTGCGGGTTGACGCCCAAAGATTTTGTAAGATATGG
GTACGAAGTGTTTTGTATAAAGAAGCCCACTGATTGGACGAAAGCTGCCA
CGTGTAGTGCGATGAATATTAAAGTGATTTTTCGTTGAAAATGAGGCTCG
ATTTGTGTGTCTTCATCATCTATCGATGCAATCGTCTTTTTAACAAAGCt
atgaaattttcgttttttggctGTGAAATCGGATTTCGAGTTCATGTTGT
TTCCATTGGCTGTATTGCCTGAATCAGATGTCTGTTTTTCTTTCGCTGGC
ATTGTGTTTCCcgtcttgaaaaaaaatttcttatattAATCTTTTTACTC
TCCAAGCGAGAGATACTAGGTTGCCATTTCTTCAAATTATGTATGCCCAA
TTTTTGAATCTTCTTTGCTATTGCTTAATTTTCTCAAAGCCTCTCctaat
tgtttatttttggtCAGCCACAGATTCAATTTTCCAATATACCGGTAAAA
ATattacaatttttaaaaattcatttcaatataGAAATCTGCATGTTCGA
AACTTCTCGTGTATTtcataaaagaaatttgtcGGCGAAACCTCCATGAT
CTACAATTGTGATTGGTCGATAAAGCTCGATTTccttttcatccaatcag
attgcacGATTTTTGAATgccgtttagttttgttttattAACATTGTATT
GTTTCTGCTTGGGTGAACATTCgaacatttgattttttctcaGTTGAGca
tgattttcttcttcatgtTATTGATATCACTTATAATATCCCCGCTGTAA
ACAAATTTGTTTGTATGCTTCTTGATTGTGATTTAGACTCcagcacgttt
ttttatatcaGCTCAAAGGCTAATGCTAGAAAATTTAGAACGGTTGGATT
ACTTTTTATgggtacaaactttcgcgagcagaaattttcgcgaggtcGAG
AAATCGCGAAACcctacgacatttactttcgcgaatttgataaaaaatac
tttcGCGAGTATAAACTTTGGCAATTTTTAGGTATATTTTAAGtagaaaa
ttaaagttttcGGTGCATAAAACCAGTGTTTTGATCGTTCGAATGAACTC
AAACCACAATTGATGGACTTTTGCATAATTTCTACACTAAGTTTTATCCT
TGTTATCATCAAAGAggaaaatttgagcaaatttccttttcagatttttt
ttttggctagaataaactttcacgaattaccctctcaagaattttcaaag
acatttactttcgcgaaaaggacTAAAATTCGAAAAGCTAAGGGCAGTCC
TCACAGCTTGAGGTTCTTACCAAGAAGTCTTGCAAATGAGTCCTATTCAT
CCAATTTGAAATgcgaataaaccagctgcgctggaaggtcagcctaaatt
gcttaatatgattagaaagatatatgttgttaaaaattgatatgatttac
taagacgagagtaaaaaaatcatcaaatttacgtTTGTACACAATATGGA
TTAACGAAAATATGCCATGTTACAATCTNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTCTCGAT
TCACataggagcggtactttaatatacttgatcaatttccatttacgctt
tataataattatctccaagtcggtccaaaaaattAAACGTAACtaccagt
gaaaaacgcaagtctagaaaaaaatcatatttgcgtcaatataatttgat
gaagaactttgGTCTTTCTCGATTCGCataggagcggtactttaatatac
ttgatcaatttccatttacgctttataataattatctccaagtcggtcca
aaaaattAAACGTAACTACCAGTGAAAAACNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNgagcggt
actttaatatacttgatcaatttccatttacgctttataataattatctc
caagtcggtccaaaaaaacaaacgtaactgccagtgaaaaatgcaagtca
tttttgcgtcaatataatttgataaagaacttcgttccttctcaaattta
cataggagctgtactttaatatacttgaacgatttccatttacgctttat
caatattatctccaattgtccagaagaacaagcatataaaatttctataa
atgtatcaaataaaaaaaacactcaagttcgagaaaacattatttttgtg
aatgATCAGATAATTAAGCTGTGAACTGTAATATATGTACACTCCATCAA
ATTCCAGCAATTGTTGGTGGTTATTCTATATtcaagtccaaaatgaaaaa
atatgttttcatgctacaaaaTAATGAGGTCTAGCAGGTAAANNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATCCTAATAATCT
AACTCCAGTGTTGTATCTTCCTtagttataagtttaaaagccaCTTCAAC
AAAATATAATGATTGTATATAAAATAAAAGCTGGCAAGAAATAaacaacg
aacgaacgaacgaaaaagcACCGCtttggcagccatattgaattgttttt
aacACATATCGGGAAACCAAACNNTGCCCTAAAAAAGCTTGAGAGTAAAT
ACACAGATCGGGAGACCAAACTTAACCCGATcggataaaaactttagaaa
tcggaataaaaaaaccaaactcTTAAGCGGCGGCTGGAAaaaagggattt
gaagggtcatcgGGGCTGACCAATAATCTAAAATTTTATAGTTGATGTAG
CTAGGCCTGCGTTTTAATAtaagaaaaaatcacatttttataaacataaA
TCTTATAAGCATACCAAGCCTGAGAATTGTCAAATAAATGAATTTATGCA
CACGCTCTTAccttaagaaaagaaattttcgcgggaagaaaattccgcga
aacaagaatattcaaatgatttaaaaatcacCTATAGAATTGGtcttttt
ggggaaaaataagccatactttaaagaaaaatttctctctggcgcgaaat
taaattctgcgaaacttccgaattttgatctgtgaaccgcgaaattaaat
tctgcgaaaattttttttccttaagGTATTGGTATACATTGAAAACTTGA
TACCACAAAAATACTGTAGAACGGGGAAGCAATTGGCACCATCGGTTTTT
CTTCAAACATTGGATAACATTGAATAGAGCAATTGGAGTCAACTTATAGG
TTGGACCCAAAATCGATTAAAACTTAtcatatttctaaatttgataTTAA
TTTTTTGCTTCCATATTATATTGCATCCATATTCGCACCTTGCTTAAATT
TCTCGCATAAATACGATAAATGTTCATTTTTAAGGTTTATTTCATAACTA
AAAAAAATCGATTGTATTCTCTATCGAGAACATGGTGGCCGAAAGGCTGG
TTTGCTTTGGATAATTTGACCGTTTATTTGTTGTTTCGGTAAACAGTGGA
CTCTCGCTGATTCCAACTTTTatcatttgaatctttctataatttgcaag
TCCCTGTTGATATAGATGCCATCGTAAAATAATTTCCATAAAACGAATCT
CTCTCAGCTAAATTCGAGAAATGGCTTTTTGGCCAAATTCGAAGAATGCT
TGAAGTTTAGTTGTTAGGATATTTAAATTATACTTGGggaaaatttgtta
aaaaagttCATGTTTTCGGATAGTTGTATTAGAAAACAGCCTCGATGTAT
TAAATGAATTCGATGACGCCATCACACAATGTGTAATCCGTTAGAAAATA
ATTATATGACTTGCCAAAACGTGAGTATCTGAATGACATGTTTACAATTT
CGCTAAAACGTTTAGCCAGTAGAAACATTTCGTTTTTATTGTAATTGACT
Ctgaaaatacagttgacgctctgtaattcgacgttctactattcgatagg
ctcccttattcgatgaaatttaaagtccccgtcaacaagaaactcttata
aacgacgctcccttattcgataagttcccttattcgatgaaaatccaatt
ccccttgaagatcgaattagagagcgtcaactgtacctTCAACACCAAAG
GGATGTCGGTAACCGATAATAACGGCTGGCTGGCTAAAATGCACGAGTAC
GCTTGAATTGCCTCAATGGTGACCAAATAACCTTTATATTATTATGTTTA
AAATCAAAGTCGAGAAGTTCCAAGTACTTAAGAACCGTTTGTAATTCAAA
TTTCAGTTTTGATTGATCAGGTACTGGCTAAACGCATAATTACTTGTGGT
TACCTCTAATTGTATGATTTCCGTCATGCGGAAATGCTTTTTAACTGAAA
ATGCATTTTTGTAATTTATGAAGCATTTCTTTTTGTTCTGTGAGTCTTTC
ATTGCTCTCTCAATTTGTCCGACACCTATGCTTGGATGAAACAGCtcaag
attttaattttgggaTTCTTACTTTGAGggagcccagctggcacacaacg
tagtttcgacgtttatctaacctttgcaacgtccatataacgttagatga
atgttgaaacaacgttgtgtgccagctggttgGGGGCTTTGTCGTTAGTC
CTGGCTCTAATCAACAAAAGAAGGTCCAGGGTGgttattattttgttata
ttTCCTAGACTTTTTACTTGTTATTCTTTAGATAAAACATCCCTTTCTCT
AGTCTAGTAAGTTTTTCCAAGTTCCTTGGTTTCTCAGGCTACAAATAAAG
GGCTTCTAAATCCTTCGAGTAGCTAATTCTCGTGTAAGGAAAGTAatgtt
ttcttttatcaaagACCGAAACAGGAATATTCTTCGTTGTAGAGATTGTC
AAAATAATTCGCTTTAAGTCAAATATGTTTAGCTAATATTAGTTCTTGTT
TTTCCAGGTTAATTTTACTAAGATTTTAATGGGTTTGAGATTGACAGTGT
TTTTGTTGAATGTACAGCCTGTTGTACAAATTTCAAGAAAGAATTTATTG
ATATTGTTCATTATTCAAAGTTACAAAGTCTCCATATTTAATGGACACGC
TTTTATTCTAATTTCTAATTTTGGAACAATCGCGGAGAATTTTCGAGTGG
TCCGAATGGTACGGGAAATGCCGAGAACATATCTAGAACAGTAGCGTGGG
GACAGGGGGCAATGCCCCTCCTCCCAGCGGCCGATTTTTTTGAGGGGCGC
CGAAATACAAAGGGCGCAAAGAGACGCCTCTTattactaatttcggcgcc
cctttgctCTCTTTTTAGGCTGtgcgcatccccagaatttattttgttat
aggggatgcgtatcgtgtatgaaattctcgtccgagagttacctcaaatt
tggggtaaccaaaatttgcataaatttacatgTTGTTTCttaattatcaa
ttttcattcattgaacaaagaaaaaaagaagtcattgtattgctatgacg
cataatcaaaaaagaaaaaagaaaagacggggttaagttgggacagaaat
attttagacgatacgcatcccctatatcaaatcatatcagagggtaTGCG
TGCAGCCTACTCTTTCACATATTAGATATGGcagtttttcagccaaaaag
ccaaaatttttgtgctcgcttcgctcgcgtaattttttaaaatatttact
ttCATAGGAagttccaaaatcaaaatcttctaaaattgcctccccaCTTT
GCCCGAATTTTGCTCCACCCACCACGCTACTAATCGTAAGCCTGTCCCTG
ATTTACATGGtaatttttttggcttaaaagtAAAGATGGATATACAGGTT
CAAGTTTGGCATTTTGAGTCTCGTCGCTCTTTTATGATTATTCTTATAGT
TCTACTTTTTGTTCAATCAAAGAGTCAATTAGGTAACATCGGAAACTGAA
GTATACGGTAATCGATTAAGTTTGAAAGATCCTGTCTTCATGTTGTcatc
aaaatataaaagatttttcataagaacatttttgaacaTTAGTCAAAGta
tatataccttatcggcgtaaaaaaaggctaaaattttgcaatttttacct
aaaaacgGCGTTAATTCTTTACCAAAACTTCAcaaaaatcaatgattttc
aatggaattttcaacagtttaatactgaaagatgacattttaatataaat
tttagttaatacttactgttttgaagtctgaatagcgatttttacaagtt
ttattggcattatttacggccctaattggcgtaagccaaAAATTAGGTTG
TGGCGGAATAaaggccggcgttaaattagggccggcgtaaaaagggccga
taaggtactacCAGAGTGTATCCAACTTTTACTGCAACGTAGTACAATCA
GTTCTGGCCACAGAGAATAGTCCGATATTTCTATATACATCCTTTTACTA
TAAGATCTTGCTTCTACATTAGAATTTTCATCCTGCTTCCTAAAACTTTG
AATCAGATCATCATACTTTGAGGACATTGCTTTGTTTTTTTGATTGAGGA
TACGGACTTTCTACTTACACAAATTGAACCACCGCGGACTTATAAGTGCT
ATAAGTGAATTTATTTCGAGTTTCGAAGAGAGTACCAACACAAGATAATC
GGACCATCAAAACAAGGGAGTTGATCTAGAAATCACTTCGCCACGCTAGC
AAGGATACGCAGATTCACTAAGgaatcaatgttcttataatgaTTACATT
GTATCTTTTTGAATGTCCTTTTCTTTCTATAGCATTACACAAGACATCAA
TCACAACAGGAATACACNATGTCCTTTTCTTTCTATAGCATTACACAAGA
CATCACAACAGGAATACATACATAAATAAATTGACATCAAAAAGGCGGAG
CAATCAATACAAACCGACACTGGCTTTTGCTTTATCACAATTATTGGTCA
TACACGAAAACCACATGAAGAGGC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00065565TCONS_00065565Clytia hemisphaericatranscript
TCONS_00065566TCONS_00065566Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_440supercontigscaffold_440:366670..375993 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.61	0.43	0.32	0.12	0.67	0.46	10.16	9.09	3.21	2.22	3.88	3.64	4.5	3.55	2.9	7.31	8.15	5.73	0.49	0.39	4.12	4.45	3.06	3.15	4.95	6.18	0.61	0.42	0.3	0.43