XLOC_039896 (gene) - C. hemisphaerica

Overview
NameXLOC_039896
Unique NameXLOC_039896
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_397:6724..12188-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_039896 ID=XLOC_039896|Name=XLOC_039896|organism=Clytia hemisphaerica|type=gene|length=5465bp|location=Sequence derived from alignment at scaffold_397:6724..12188- (Clytia hemisphaerica)
TTGCAACTGATGCAAATGATGCTTCGAGATATTTCTCGTCCACAGAAAGC ATCTGGCAAAGCAGTAATCCATTACGACTTCCACGCTGAACAGGAAAAGG TTTGTTTGGCTATAATTAGTTTCCGATTCATTAAAGTATGGGGCTTTCGA ACATAGATATAGTTTTAACTTAAGAAAGTTCACAGTGGCAGTTTGTAGGA CTCACACGGCTCCGGCGTAGTTTATGATTTTGAAAGGTTTAAACCGTCAT TTAACTTGGGCTTTATTTCCCGCTACATTTGTAGCACCAAATTGGGGTCT TTGAAAAACAAGACGACTTCATAGATACCCTGTTTTTTTTTTATGAAAAA TATTAATCCATTAAAAAAAAGATTCCTTAAAAAATGCGACTAAAGAATTC CAATCTATAAAGCGTAAACAAAATCTTTCAATTCAGAGAACTACCAATAT ACACTTGAGAAAAATAATTTTAAATTTTTTTGAAAATGAAGAAGAAACTG CCAGAAACCTCATTTTGTGCTTTGAAGGAACTTGTGATAAAAACTTTTAT TCAACTTCTTTCTATAAACAGTAGAATTTATCTAAAACTGAGAAAAATGG CTAGTCAGAAAAATCTGTTGTATACTACTTTCTGATATGACTGATGGCCC ACCACCATCAAAATCATTTGACTTTTCCAGAAAAAAATTGAATATGGGGG GGTGAAGGATATAACATTTTTTGGAAATTTCCCCCCCCCCTGGACATTGT GCCTTTTGATCCCCCGGACAGCAGGTCTAACCCCCCCCCCCGCCCCGGAC AAGCATCAGTTGACCCTATCGAGAGCAAGTTTACCCCCCCCCCCCCCCAA AACAAAGCAAATTTTTCAGATTTTTCACTACCCCCCCCCCAGGCACTATA TCCTCCACCCCCATGTACAGACATTTTCTGGAAGAGCCCATTAAAGGCAA AAGGCAGTTGAGTAGTTGAGCTCCAGCTTCTGGACTAAAAAATGGCAGGG TAAAAACTAGCCAACTTTAAGCTTTAATGAAATAATACTCCTTGAGATTA AACTTTGACTCCATTATAACTGCTTTAAATGGCATCCCATTAAACAAACC CTCCATTGGGTTTTGCCGTTTATCCCGTGAAAAAAATATAGGGGAAAGAT TTCAGAAAAGTAACAAGATTCTTAGTGCAGAAATGGGAACCTTATACAAA CAACAGTACCATGATTCAAAATGAAAATCCTAATTAGCAAAAGGTGTATC AAGATCGGTGAAGTTTGATTGAAGCTTGATTAGTTTGATTTATTACCTTG TTTCCATTCTTTTTACCTTCCGACGGCTTATTTAGCACACGCCCACGCTA AAGCTTAAAGAGCGAACCAATATCTTATCCCATCAGGGAGAAAAAGCTGA AACTTTTACTAAATTAACTCATCGAACACCAATCAAACTTCATCGGATAA AAAACTGTTATCATTAACGAGGGACCGCTGTACATTTTGCAGTGGTGTAC GGTGGGGCTGAATCTAAAATATACTTTGTACGGCGGTGAAAATAGGTTAA TAGACCTTTTTTCAAAGAGGACGTCCTGTTGAATAATTATGTAGTCCAGC CATAAAAACAATGATAGAGCCATGCATAATTACTGTATCATGNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNTGCATATTGTAATAATTATGGATGG TTTTATCATTGTTTTTCTGCTGCACTACATAATTATTCAACAGGGTGGCC TCTTTGAAAAAAGGTCTATTTGAAATCTGCTATACACCCCACCGTACCCA CCGTAAATCACAGTACAATGACAATGTAGTTTCGATAATACAAAAATGAT TGCTGGGGGCGGACGACACAGGATTTCAGAGGGCAAAAGTTTTCACAAAA ATTCGAAATTTCCAAGGTGAGAGAAGAAAATGTATGAATTTCCAAGGCAA TCAAATTAAAAAAGGCAAAAAAGAGTGGAAGTTCCAATGGATTTTGCAAA AGTACATAGATTTTTATCGGAATTTCCGACCACCACTGGAAAAGAAAAAT TATTTCCAAGGCTAGAAAAAATTAAAAAATGCACGTCGTCTGAACGGGGG GTAACAAAAATTTTCTGGAATGGCCCATTTCTTAAAAATACTTGCTAAAA GTAAAACTGACTGTTTGTCACAACTGGTTTCACTATATTAACATATAACT ATCTGGTGAAAAAGGAAAAAAAAATCATACCTGTGCTGTTTGTAGTTTTG GTGAAGAAGAGAAGAGAGGGTATAATAATGTTGTTGCTGTAGAAAATTAA CTCTTTTTGTACTACTTACCGAGCATGATCAATTGATTTATTGGTGCATT CACTAACTACACAAACATACACAAACATACTGTGAATATTAAACCTCTTT AAAAACTCTACAAAAGACCAGAAAACATGATAAAAATTTATACAGCAGCA GCAAGTTTCAAAAACATGTGCAATCAAGCAGCCATTAAAAAGTTCTCACG ATAAATGTTTACAAAGGCTTGGTTACACTTCTTGCACTAGCATATTTTAT TTATTAAGAAAAGCCCTGTTTTTTATCACTTTTTATCTTTGTGAGTGAGT CCACTTTTAGAATATTGGCCGTAGTACGCCCGCAGTCAAACGCCCACGCC ATAATTTGCGCCCCAAAAATTTTCTCGATACATACATACATACATAGAAA GACTATCGTAATACTTTCGCTATGAGAAATTAATAAGTATTTAGATTTTG AAATTCATCTCCGGTGTTTTTGCCTATCGTCCGACAAAAAAGACTGGTCA TATTCAGGTTTGATTCGATGAAAGAATTGTGAGATTTCTATTTTTTTATA GTTTGCCAAATTGCAACAACAAAATCAAGCTATTGATAATATTGGACAGC CAATGGCAAGCAAAAACTCCAGTGAACAGCCAATGGCAAGCGAGAACTCC AGTGAACAGCCAATGGCAAGCGAGAACTCCAGTAAACAACCAATGGCAAG CGAGAACTCCAGTGAACAGCCAATGGCAAGCAAAAACTTCAGTGAACAGC CAATGGCAAGCAAAAACTCCAGTGAACAGCCAATGGAAAGCGAGAACTCC AGTGAACAGCCAATGGAAAGCGAGGACTTGAGTGAACAGCCAATGGTAAG CGAGGACTTGAGTGAACAGTCAATGAGATGCGAAACCTATGGTAAACAAC CAATTAGAAGCGAGAGCTATGGTAAACAACAAGTAAAAAACGAGTGTGAA GAAGAACCAATGGATATCGACCACCATGAACATAATGAGGTATGTGGCTC ATTAGATTTTATCATGTTAAAGTCGTAGACGATCATCGTCTGACAACAAT CTCTACACTTTTCATTATACGCAATCTTAGACACCAGATAAGCATACAAG TATTCCACAGTTCGGGTTAATGGTTGACAGGAGGTAGTTGTAACAAGCTC AGCATACGCACTGCCAACAGCTATATAGTTATAGTTTTAACAACAGTTCC CCTAAGTTATCTACAACTATTACAGGTTCCTTAATCATCAAAATTTCAAT CTGTATCTTTGTACGCCAAATTCTTCTAAAAATCTCTAGGTTCATTGTAC TTTGTCGTGAGTGACCAAGTACATTGTATTCATCGTCTTTCCCTAAAACA CTGTAATATCTCTGAGCAAATAATGACGAATACTTCCTTTCTCTTCTTTA GGTCGAGCCTATGGAAGTTGACGAGGAGGAAATGTCTGCAGAACAATTCC ATTCTTTGTACCAAAGATATCTTCAACTCCAACAAGAACGTGCTAAGGTG GAAAACAATCCATTTATAACAGCGGAAAAAAAGAGAGTAATGATTGAGCG TATTCAACACGAATACAACATTGTAATGAATGGAAACCCATTCCCTCCAC CGAACAATCAATTCGACTCGCCACCAAACAACCCATTCAACTCGCCACCA AACAAACCATTCAACTCGCCACCAAACAACCAATTCAACTCGCCACCGAA CAACCAATTCAAATCGCCACCAAATAACCCATTCAACTCGCCACCAAACA ACCAATTCAACTCGCCACCAAACAACCAATTCAACTCGCCACCGAACAAC CAATTCAACTCGCCACCAAACAACCAATTCAACTCGCCACCGAACAACCA ATTCAAATCGCCACCAAATAACCCATTCAAATCGCCACCAAATAACCCAT TCAACTCGCCACCAAACAACCAATTCAACTCGCCACCAAACAACCAATTC AACTCGCCACCGAACAACCAATTCAAATCGCCACCAAATAACCCATTCAA CTCGCCACCAAACAACCAATTCAACTCGCCACCAAACAACCAATTCAACT CGCCACCGAACAACCCATTCAACTCGCCACCGCAAGACACATTCCGCTCG CCGCCGCAAGACATCCAAAAGACATCAAATGTCCCTTCTCTGTTCACGGC TTCAGATAACGGTCCACAAACTTTCCAACAAGCAGTGGACTACTTCAATC GAAGTGAAGATAATATTCCATTCGCATCTAAGGAACGATGGGATCGATTC GAATCCTTCGGGAGCCGATTCATGATCGATTCGACTTACCCCAATGATAT TGAAATGGAAGATCTTTCGGAGGAGCCTGTCACTGCAGACCATATTGAAC AAGATCACAGAGAAGAGATGAAATATGACAATTACATTGAAATGGAAGAT CTCTCACAAGAACCTCTTCCAATCTCTTTCCCTTTCCACCAGCACGGAGA AGAAGTAAAAGCTATTGAAGAACAATTCTTCACCACAAATAATACACCTC ATCAATCCTTTGCTCAAAGGATGGACTCTCCTAACTGTCAAATTATACCA CAATTGCATGTCAGCCCAGTTAACCCAAATAGTGCATTTCGAAATTCCAA TCTTGACATTGTTACCGCTAGAAATGGTCACTACACTATCGATGATGGAT CAAACCAAATCCGCTCATTTATCCCGTGCAAAGAGCCTGCTGCTTACCCC AACAATAAACAAACAGTCAAAGAAGAAAAGATCACTTCAAAAGCAGCCAA AACAAATCAAAGCTTGCAAGACAATCTCTCCGAAGAAAATATCTTAGTTC TGCAAAAGGAAATTGAGAACAAAAAGTCTCTCCTAAAATTCCTAAAGACA GAAGTTAAATCGTTGAAAAAGGAAGCTTTCCCTAATAAAGACAAAAAGAA GCTCATTGAAAATGAAATGAACGATGTGGCGAAAGATCTCTCCAAGTTGA AACGGAAGCTTCCGAAGTCTTTGAGACCCATTCGTTTGCCAAAGAACGAT GGAAAGAGGAAAATGGAAAGATCGCTGGTCGGTGCAGGATTTGATGGAGA CTGTGCTTCATCTTTCGAGCGTCCACACATCAAAGAAAATCTTTCACCAC CATCAACTCGCCGGG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00063651TCONS_00063651Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00063651-proteinTCONS_00063651-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_397supercontigscaffold_397:6724..12188 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.12 0.04 0.18 0.19 0.07 0.02 0.23 0.15 0.1 0.12 0.33 0.06 0.15 0.05 0.07 0.08 0 0.03 0.06 0.1 0.05 0.05 0 0.02 0.13 0.33 0.08 0.1 0.1 0