XLOC_039635 (gene) - C. hemisphaerica

Overview
NameXLOC_039635
Unique NameXLOC_039635
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_385:18403..25681+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_039635 ID=XLOC_039635|Name=XLOC_039635|organism=Clytia hemisphaerica|type=gene|length=7279bp|location=Sequence derived from alignment at scaffold_385:18403..25681+ (Clytia hemisphaerica)
aaaatatttgacgtcaaatacatAATCGAGCTTATTATTGAATAACAAAA GGAAAGGCGACATGGCTTTAATCGGATATGGATGAATTTAATAATTGGTC ACCGTGAAACAAGAATATGAAGTATAGGTTGTTATTTTGTTTGGTACTAT GGAGTCCTATCGTGCTGTGTTCTCGTCGTCCTTTATATCAACATTATGTA GAAGGTATAGAATTTTAACGTTACagttagcccggggtccacttaaacct ttatgatagactggatggcgcaattaagtggcccggtagtatatggtaat atgtttttgcttaggcggactgtaaaacagtccgccagattttagttctt tttggaaggtaaaaacagtatgaagcaatgttattatttgagaataaggg attgcaaatctgttactgatgtttgtttctcatttttggttatatctttc aactcaaaggagtttttttgttatttggattttaaacattctttttcaaa atggcgacctagTCCAAACGATCCTAGTCTACTTCATTGGACTCAGcgtt atcaaaaattatcaaaaagcaaagttcagccagaagtagacactaaagtc tgtccagatataattggcagtggaaacaagaatgcctgtaacttttgata attgaatataattatggaaatttttttgcttgtttcagagaatcaaaagc gctatgaatgtatttttgttgaaagattcgcgatttttagcggttaaatt tgcgattgtaaaaattgagctttttttctacttatatgctttaacgttca tttttacaccagtggtagttcaaccttaggttaagaagtttattaaattt caaggcaaacataTGGAagccgaaataccccttggtagcacttttctgtg aaatatcaaatctccaacttattactaaaaacggggtaAGGTTTAAGAGA CAATGATAACTAAAGGGGAccttataccttatcggggaaaaaaatgtcgg gggaaagtgacgaaaattttgagggggtgaccaaatttttccccgacgaa atatttccccgacattttatcacccgaccaaaacttgtaccGATTTTTTA TCTccgaccaaaacatttacccgAAATTTTATACCGCAACCAAAATTTGA ATCTAATTTCTTTCcacctttatttaccgaaattagtgctttaaacgtcg aattacaagatccattttcgagctagtgaaggaaaccaaatcttttggac agtttagtcgcgggtgaaagtgacgaatttgaaatttttgccgggaaaag tgacgaatttgaaatttttgccgggggaaaaaaaagtgacgaaaatgcct ctaggtgacgaaatttttccccgacgaaaaaaaaacccgactaaatgaaa catttttccccgataagagTTTAGaagaaattcgagttatagaggttcga aataAAGAATAATTCATAAGAATTTTTATGACGAAATTAGCCAAAAAATT aggaatatgctaagaataatTACCACAAtgatggaatttggcaactgaag ctaagaatgcAAATTTTAGAGCAATTAACCTACAAATTGCCAATTATTCG TCAGCAATGCTAAAATGTTTCAACAAAATGCCTAATTTgagtaatatttt tttgttcacTAGATGGGCCTCTTTCAATTGAAACAAAcatttttcgattt cgatgattttttaattgccgatgacgtcatcgattacgtcattttttggg ctattttcctttatagcttctcaaatattgattttcaggtatatgttatg atattttttggaatccttggataaatactgaggttaagcatacaaggata atcacgacgacggacgaaaaatgtaataggctagtgaaagtacgaaattt gattggttgaaactcactggcctgttaaattttctttcGCCGTTGTGATT TCACCGACTTACTTAACCTCAgtaatatctttcatttgagccatatatga gcatctaactttcactttcattttcaagccccagcaaaagtaatgacgtc acatggggaccagcaaaatggtcaaaatttttctcaccactcgttttCGT GATCTTAtagacctaattgatcatttaaaaaagttagtttgcttttaatA AGTCTGTGCACACGAAAAACATAGTCGCTCTCactaaaatggaaaaacac cgttctcataaaaaaaacatgtatttttgatttgtttcaGGATGTAAGAA ATATGAGGTTCAAGAATACTGTCCAGGAACGTCTACTACCCTATACCACA CAAAGAAAAAAGGTTATGTTTGGTTTAAGGTCATTGAGAAAGCAAAACCA AAGGATTCATATAAAACGCACTACGATGAAGGATACGAAATCAAAGATGA TGGTGATAGATATTCTATCGAATCTGGTGACCTAAACATCAAAAAGCTTG CAGCCAATGATCACGCATTATACTTCTATAGACCAAACTTTACAACACTC CTTGAATGTCCAAATTATAGAATAATCGTATACGGTAAGATATAAgttac gtgttttttataagaacaaactatattagaACATCAGGCTTCGATagtca aaatatcaaaaacattttgagaCTTTGCagacacccgatttcttaggaaa atggacaaagatactcacaaaattgtgaaaataagaacatgtttagaaca tttttaggcttaactcgaaaagttaagaatatccgaatgcttcaaaagtt ttggatgttcttataaaaaaaacaatgttttAATCTCTATGACCCAGTGA GAATTGTTTGAGTGAAGATCGATGATAGTGCTAAATTCGAGCCTTTCATT TCTTATAAAAGGAATGAGTAATGATAAAATAACTAGGAAATGCAGAACAC Ctggtcttattttttcttcctccatttaaatatttttgtttttaaagaac aaaggagcttaccttaagggaactaattttcgcggtggGTGGGTATTTTC GAGGGAAACAAATTTTACGGTATACACCCAGAACTCCAAAAGTTGCTTCC Ttaacggggggggggttcaggggtcttaaataccgtcataccgacaaaga tttgggtcaaataccgtaataccgtcgataAAGGAAGCCTAATTACCTAA TNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNaaaagggggggggggggttcaggggtcttaaat accgtcataccgacaaagatttgggtcaaataccgtaataccgtcgataA AGGAAGCCTAATTACCGATACCggtaaaaaattaaataccgtaatcccgt cgtttttttcttcgggtaataccgatttaccggggataaaaggcccaata ccgtcgtaccgtaaaagtgaacccCCCCCCTTTACGGTATAGAAAGGTTA AATTTATAAGATTTAGAAAAGTGGGTGCGAATACAAATTCAGTATCACAA ATAATAAAGATTAACTTCTTATCCTTGTTCTTTTTCAGGTTTAAAACCCA AACACAACAGGATTGAGGTAAAAGAAGGCGAGACGGCTACTTTAGGATTT TATTTGAACGTACCTAGTAAATATTCTCCTAAAGATTCCAAGATATACAA AATGGACGGTAAAGTCATGTTTGACGGAAATAATGGCAACACAGTTAAAT ACTCACTTAGTAGTAGACTTGAATATATGCTTTTAAGGTATAGACGCAAG AATACtaaagtttttgagaaattcttgtATACCAGTAAGTTTAAttgttt atttgtttcttttggtgtttttccttTTAATTTCAATGATGAGAGTGCCA TGTTAtgttaaaaaaagaagatttcatcttttgaaaaatataattgtttt tggatgaatatacgaaaaatgttttcgaaAAGGTTGTTGCAGCAAAGATA CCAGTTTCCGGTTATTTGAATTCTCCTACTTACTTCAAAGCAGTTAGCGT GGTGGCCGGGGAGGCAGAAGGGGCAACCTTCACCCCAATTAACCAATTAT TTGGGGATGATAATTAGTCTCTAGCTATATACTTCGTTCAAGTACGAAAC CAGATAAACAGTAGTATACATACatgcttttttaaaagaatagtgtattt tggatgagggtcaagtattcttgaGAAATTACCAAAATCGAGGGTGgcat attcttaacgtattcttacttgtTAGACTTGACTTTTATACAAACATGAG agatgatcaatttgagagtttgggACTTTTGAGTGCACATTGAGAGCTAA AATCATATTTCTGCTTCGAATTTTCAATTTAGGTCTAACAAAAGAAGCAG TTTTATTCcattaaccaaatacaaaatgactatattcttatcaaattctg tgaaactttAAGGGtatttctacggaaagaccccggtttttgccagtagt ggcaaattttatacaacttttgtctaggttaaatttgccactactggcta aaaccggggtagtTCCGtaaaaaaacattacgtcatgaatatcatgaaga gaattataaaaaaacgtgtatttcattATCATTTCTTTCTTCCTTATAGC TTTGACGATTACTGACATACAAAAGAAACAAGAAGGACTCTGGAAAAGCG AATGGACAAGGACTGGTCCTTATGGAACAATTATTTGTAAAACTGGAACT TTTGGTGCCGAAGTATTTTTATACGTAGATAGTAAgctaaattttaagat ttcgtaGATGACACTGCACGCtctcttttataagaatgtattctataaga atatttatgacgAACTggaccaaaaaattaagaatatcgtaAGTGTGTAC ACCAACAGTCGTAAGTGTGTACACCCCGACTGCAAAAGCAGCCATCGACA ACAGTCGTAAGTGTGTACACCCGACTGCAAAAGCAGCCATCGACAACAGT CGTAAGTGTGTACACCCCGACTGCAAAAGCAGCCATCGACAACAGTGACG ATATCCATATCCATCTTATTCTATGAAACCTGGGCGgtaaaaatcaattc aaatccGACGTTTATATGTGAAaacttactacataggaaagtATTACACA AGTAGATTTCCCTCTAGTCTTCGGCTATATTAATCTTATTTCCTATTTAG CTCCAACAACAACCACaaccacaacaacgaccaccactACCACTACgaca acaacgacaacgacaACACCGACAACaccgacaacaacaacaacaccgAC AACACCTAAACCAAAGGATCCTCTTGAATCTGGTTCCGCAAAAGCAATCG GCGCAATATGTTCAATCGGTATTTCATGTGCCGTCATCTTTGCTCTATGG aaatttgttttcgaaaagTGAGTAATCATAATTGGGAATATTTCGAGGTG ATCCCTCCCAGATCCATTCAAGCCGAAAGGAGCCTCGAATTCCAAGTTTC TACACTGtcgaacatttttaaaaaacagtGAATATGAGTGGATAAATTAG GGGATTGCAGTAGATAAAGGAGTTCTTCACATCAAAATCTACCACTGCTG TCTTTTCCGGATGTAAACTTTGCACTTCATTTTTTCCTAATCAAATCCTA ATTTGACCGATCTGCTGcaaagataaaaaaactttGTCCCCGATTATTAT TATTGAAACAGACAGACAGACTATTGAGGCGTCCCCTTAACGCAAGATAA CATATAGCATTATTGTCTACATCTGGTTCCAAGGTAGTTGGTCTTGAATA TAAATCATTTTGACATTTCAGGAAACTGAGTGGTGATCAAGAGGAAGACG aaatagaaaaaggtgttaGAGGAACGAGAAAAGACGATGAAAGCAATAAC AATACTAAAAAGAACGGTGGACGTTCCAAAAGACGACGTAAAGAAGACAG CCAAGAAACGAATGAGGAAGATGACTCCAACCAGAAATCGAAGAAGGATA GCTCACACGaagagaaaaatagaaaaaagtcaCGACATAAGATGAAAAAG GAGACTTCGGACTTTGAAGACTCGCCAGAGGTAGATGGAAGGGAAAAGAA GGGTTCCCGAGCCCCACCAGGAATTCCTGGAAGAGAGATTTCGGAAATCC AAGAGCAACCTTCAATACCCGGAAGAGGAAAGCACGGCAGCCGAGCACCG CCAGGGATTCCCGGAAGAGAGACTTCGGTGATCAACGAGCAACCGTCAAA ACCGGGGAGAGGAAAACAAGGCAACCGAGCACCGCCAGGAATTCCCGGAA GAGAGACGTCCGCGATCCAAGAGCAACCGTCAATACACGGAAGAGGAAAG CACAGCCACCGATCGCCACCAGGAATTCCCGGAAGAGAAACTTCGGAGAT CAAAGAACCCTCAATACCCGCAAGAGGGAAGCAAGGTCACCGAGCACCAC CTTTACCAGGGAGAGGAGGCGAAGAAACACCCGCTCTACCCCCTGGAAGG GGTGGGCAAACGAAGGATGACGGACAAAGACGACGGAAGGAAAAAGAAGG GTACAGAAAAGTAAGGGAACACGACCCAATGACGCCGCCCTTGCGAGGAG ATGATATTTTCGCACCGTAGAAATAGTTgtaaaatgattttcttttactt taggTAAATATAGATAATCAATGACCATCAAATTCTATACCATTTATTCT TTCCTtgggtatgtttttttttcgattccAATAGTATGGTGCAGTTTGAG TATGGTGCAGTTTGAGTATATGAtagcaaagaaatattttcgaTATAGAT AAatatgccctccgatgcatcgaaatgggtcctacccacggtggagtagg aatcacagcgcaacaGTTATCAACGGGGTATAACTCATTTCTCATAAATG ACAATAATACTTAACTCTACCCAAATAGTAACAAACAAGATGAAAGGCAT AGTATTTATGGTATAAAGTATCCGAAAAATAACTCCTTTTCAAgtgaaac gaaaaaaaaaatcaacagcTTAAAATCTTTATAAGTTTACAGTTTAAATA TTTCTgaaaattatttagaaaaaaaaaagatacaacGTCTTTCAAAGGTG TCGGTGTTTGAACTGGTTTGAATTGAGAAAATTCGGATCCCGAAATTCTC AGATGGTTAAAGAATCTCTCACTCACCTCAACAATTGGTGAGAAGAGATT TTGATGAACAGTGGTTTTAGTGGGTTGGTAGGAGATGAAATCTTTAAGCT TCCTCTTTATATCGATAATGTAGCTCAGTAACGTCTGTTTGTGAAACTTT AATCCATCCAGTTTCTTGCATGTGGTATA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00063250TCONS_00063250Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00063250-proteinTCONS_00063250-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_385supercontigscaffold_385:18403..25681 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.23 0.2 0.11 0.41 0.12 0.18 0.11 0.21 0.03 0.1 0.12 0.09 0.11 0.19 0.07 0.09 0.12 0.12 0.12 0.15 0.32 0.48 0.13 0.27 0.11 0.21 0.24 0.13 0.23 0.27