XLOC_039634 (gene) - C. hemisphaerica

Overview


Name	XLOC_039634
Unique Name	XLOC_039634
Type	gene
Organism	Clytia hemisphaerica (Jellyfish)

Sequence

The following sequences are available for this feature:

gene from alignment at scaffold_385:5870..15486+

gene from alignment at scaffold_385:5870..15486+

Legend: gene

Hold the cursor over a type above to highlight its positions in the sequence below.

>XLOC_039634 ID=XLOC_039634|Name=XLOC_039634|organism=Clytia hemisphaerica|type=gene|length=9617bp|location=Sequence derived from alignment at scaffold_385:5870..15486+ (Clytia hemisphaerica)
aataatttgaccaaTGTATTCGGTATATTAGTTTTGTTTCTTTAGAAACA
GTCATGTAATGTTAAAATAAAGTATTTCTATGGTCTCAGCACTTGTTTTG
GATATCACTTATTTTCATCGTCATTCGAAAGCTACGCGAGAAGAGGATCA
CCAGTATCTAAAATGTCCTCGATAACTTTCTTTATCACTTATATTATCTC
ATCACTGGTTTTGCTCAATAATAAAGgtaattaaaaataattaaaaattt
ttttggcatgACATTTTGGCTTATTAGATTAATACTCTCAGTATTCTGTC
AGGGCGGCTCGCAAATTTCACTTCataccaaatgcaagcaaccttggttt
acaaacccaatgcctaaccgcttgCTCTAACGAAACACGACAGAAAAcag
tcattcacaaatacttatagcgtataatttacagacctttattaagaaaa
ctcccaaccctaccggtgcccctacaaaatatatttttagttcgataaaa
gaaacaccatctaccgcaaaaaaaaattcaaaatgtttttttcttgccGA
AAagaagctcttcaaagttgaaatactcttctttgcaaaagtcttctttt
tcttcctcatcgaattttttcattgtaattcttaaattttcagactcaag
gatagttggcctaacagtcacagttttgtgtgctacatcaaatagaaatt
tatattttttacgtgacaaatatttcaagttcactatggtcagagccctt
aagaaatTGTTTTCTAATCATCCGCTAAAATAAGCTCCCGTGAAATAATT
GAACAGACGTCAACCacgtagcgagcacctcactaaaaaccgggattttt
catctcgtttcttagtgaattccactttgacgattttcgaaaaatagaag
tctttcaagtgttttgacgcaaattcgattattttgctactgcagaagct
ttgaaagttaaaagtgacgtaagaaaatcttagaaaaattttagagcccg
aaaacctgggctcaaaacattcgaaaaagtcgcaaagtggaatagacgtt
aattgcgtaaaaaacgcgggtgacgtctagtataggctatcaACCACGAT
GATAAGTCCCCACGAAATCTAAGAATTTCATAGAAACGCCCAAAAACGAA
ATTTAatgccccccagcggtttgcgtgaatgcgtgaatgggctttttcac
ttccgtgaatgcgtgaaaattaaagaaaaactgCGTGAATGCGAGAATTG
GAAGTAATTGACCTTTTTTGTACCAATAGCTTTCTCATTTGGAAATCTTA
ATTAATAATTCTTTCAAAGAGGCTCAGCGCCATAgatttgtaaagcccga
agaactagatggagtgctttaagccattccaagcaaaaaagtgatatcgc
aaaaaatattgctgcttttgttttcgaaaacccgcgaagcttctgattga
tcaagcactgaaattctatattgtaatgtcatgtgacttaggtaggattt
acTACCTAACCTCTCTACCTACCTACCGTACGCAAAAGCACGGTATCTAG
CCATTTGGGCTTTACAAATCTATGCTCAGCGCCCCAAATTTAATTGAATT
CAACTGTCTTTCTATTCGTAGCAAACCTGGTGGATGCCGAATGTACAGGT
CGCTGTaagttgaaatattcttttcagTTCTTTCACATTTATCTTATGCT
CACTGTTACGAACTTGATTGTGCTGTTATAGCAAATTAATGCGTAGTTGA
TCGACTGGAGAATTGAGAATGTTCTTTCGTATTTcctttttgtataattt
ttatgCCTTCTAGGGAACTTCGTGTTTTAGATAAAAAGCAATGTAATAAA
CCACAAAGCAAACTTCTAACACAAGAAAATAGGGTCAAAATGACTGTATA
GATGCCCGTTGAATTTGACACCGTGAATTTTGAAGTTCTTGACTCTTTCG
ATGTCTTGACCGGCACTTTTTATTTCGGTGACCAAGTAAGCAAGCGAGTG
GCGTTGTGCTAGCTGTCTGGTTGAAAATACAGTCATTTCGGTCCGACCAC
TAGTTAATGTTATCGATTTCTATATACACGGATTCGATGGTATTCTGTAA
CTCTTTGATTTTTGCGTGANATTTCTATATGTACGGATTCGATGGTATTC
TGTAACTCTTTGATTTTTGCGTGACGTAGTAGTTTTGTATCATCAGCGAA
GAATTTTCTcagattttctactttttccccaaattttacaataaaaCACC
CTACAAGGGACtgacttttctattttggtatttttgctACCCTACCTGGG
ACTAGTGGGGGTTAAAAATGGTATACTGACTAGTAGCgtatccccgtaac
ccattttgccctagtaccccctggactattcttataaaagaaagtgtaGC
GTATATTGGTATCCTTATAAAAACGACtattatatattaatattataGTG
GGACTCTCCAGAGTAAGTGAAGAGAAATTCGATGTTGTGGTTGGTGACGT
AATAAAACTCAAAGCACAATCAACACAAGGCGGATTTAGGTATCATTGGT
CTGTGAATGGGCAGACGTTAACATATGGATTAATGCGATTCTCACCTCAT
TATGTGAATAGTAATACAGCAAGAGGATCTGGTAAGTAATATATTACTAA
ACTTGCCGCGTAGTCCGAGGCAACTCTAGTGGAATTACGTAGATggtggg
ggtacttaggcaagtgtACGGGTATGTGCCAACCATAAGGATGTCTTTTT
GGANGATTTTTTCTCGTTTCGTTCGCTTTAAATATGCGGTCCAGCATAAT
AAGGAGTGAAATTAAAGACACTACGCATGAGATTCTTCCAAGAATGGGGG
TGATGACACGTAGATggtgggggtacttaggcaagtgtacgggtatgtgc
cgacCATAAGGATGTCTTTTTGGAACCCTGAAGTCCCTGTAaaggttgga
aaaatcagaaaatcaatcTTCAGTCCCTGTAAATATTGGAAAAATagccc
cccggacaagcattcAAAATTACCAAACAAACCAAAATTACTCCTAAACA
GAGCAAGTTTACCCCCCGGACAAGGCAAATTTTTGTCCCCACAGCGAGTA
TGGCGCATAGATATTGGACTGGAATCTCGAAATTTTGTTGTTTTGTCGCG
CAAGCATCCCCGAAGTTAGTCTCTTCCGTAAATCTAAATGTTCGGTTTTT
TTCCGGGACGGTAATATACATTTTTTCATATTACGTTATATGCTATTACC
ATTATTACATATTACTGATTTAGCTTTGAAAAGCTGAAGCGAGTGTTATG
AATGCAGATTATAACAGTGTATGATATAACACGAATACAATATTAGTTGT
GCAAATCTAGACTAGAGACTACTTCTGGCTGAACTTTGCATTTTGATAAT
TTTTGATGACACTGAGTCCAGTGAAGTAGACTAGGAGCATTTCGCGAGGT
TGCCATTTTGAAAAAAAAATGTTTAGAATCCAAATAACAAAAAAGCTACT
TGAAGTTGAAAAATATAATTAAGAATGAGAAacaaacatcaataacagat
tttgaatcccttattttaaaataaaaacattgcttcatactgtttttacc
ttccaaaaagaacgaaaaaaaagagcatattaccatatactaccgggcca
cttaattgCACCATTCAGTCTatgaaaaagcaaaacaaacaaaatggcag
actggttatgattatacattttgataaataacgagattgctcacgggaat
ttctaacccgcgcgagcaaacccacacctgtcaatcattttttaggcctg
tcaatcattttttNcaaaacaaacaaaatggcagactggttatgattata
cattttgataaataacgagattgctcacgggaatttctaacccgcgcgag
caaacccacacctgtcaatcattttttaggcctgtcaatcattttttagc
agcATATTCAGTCacttgtggttctgaaaaaGGTGTTTGTAAGATAGCAA
AAAAGagacgaaagtcgattttcatgtatttttttagttgaaagttttgg
aatactagattttcaagagaagggaaagtcatGACTCTTGGCTCTCCACC
CACTAAccaacctgatccattttgaaatacagtaCTTGATGACAAACTCA
AACTGAATAGGTGACACTActtagaaagaaaatttttgtttcttaaaatt
ctaaccggaattttcaaaaatatcaataagagctcataaaaccagaaaaa
ggtTTGTCAtcaatgctgacaaaataacacaTACTACAACACACCATTTA
GGATTCGAACTCTCAAAAATGTTTCCTTGTCAGATGGCAGATTAGCGCCT
tatctagtctgaatcgcagacctctacaaaaccccatNTCATTATGTGAA
TAGTAATACAGCAAGAGGATCTGGTAAGTAATATATTACTAAACTTGCCG
CGTAGTCCGAGGCAACTCTAGTGGAATTACGTAGATggtgggggtactta
ggcaagtgtACGGGTATGTGCCAACCATAAGGATGTCTTTTTGGAACCCT
GAAGTCCTTGTAaaggttggaaaaatcagaaaatcaatcTTCAGTCCCTG
TAAATATTGGAAAAATagccccccggacaagcattcaaaattaccaaaca
aaccaaaattactcctaaacagagcaagtttaccccccggacaaggcaaa
tttttgtccccacagCGAGTATggcgcatagatattggactggaatctcg
aaattttgttgttttgtcgcgcaagcatccccgaagttagtctcttccgt
aaatctaaatgttcggtttttttccgggacggtaaTATACattttttcat
attacgttatatgctattaccattattacatattactgatttagctttga
aaagctgaagcgagtgttatgaATGCAGattataacagtgtatgatataa
cacgaatacAATATTAGTTGTGCAAATCTAGACTAGAgactacttctggc
tgaactttgcattttgataatttttgatgacgctgagtccagtgaagtag
actaggagcatttcgcgaggttgccattttgaaaaaaaaatgtttagaat
ccaaataacaaaaaagctacttgaagttgaaaaatataattaagaatgag
aaacaaacatcaataacagattttgaatcCCTTATTTTAAANNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNACCAGTTAATTGTTTtaagattgatgacg
tcatttctagatttttttcaggcacctatatctcgtgattggcttgtctg
tttcctttcaaatttggcatgtgacgccttgacaataatgccttgaaatt
aatctaattagattttgtcaattttggcgatgacgtcatgatttcggcgt
tacttctcgttacttcttgttacttctcgttacctaCTCGTTACCCACTC
GTTACTTCTTGTtgcttctcgttacttctcgttacttctcgttacttctc
gttacttcttgttCCTTGTTATAGTAACAACCATAGTTACAGTCGTATGG
cgtgaataaatattttagcgtgattccagaaaaccccatttttaggaact
ttttggctcaaatttttttatgattatCTGCTTAAACCAACTTTtaacct
atgatggtaccccaCTTTCATGcataaaaagagaaaatgatccaattaat
gatccaatttttcacaaagtccacaaaaaacctatttttagccatttggc
tgaaatttactcattaaatttttttttcgaaattcggaCTCCGTAACATT
TTGGCcgccaccattttgcacctttgtatcaaaaatcaaaagattcctat
gattcaatacTGAGAAAAGTtcgttggtaacagacgaaaggttgatttat
aggacctccaggtggTCCGAcaagttaagaaaatggacaaaatttatttt
ataatttaatttattttaaggcttaaaactcaaaaagttaagaacatgcc
aagatttttcaaataaaaaacttgtAACGCATACcacaaaaacctttttt
aattcatttacATTTTAGCATTGGAAATTCGGGACATTCAACGGAGACAT
GGTGGAATATACAAACTTAAATTTGTAGACTATTCAAACAATTGCCAAAT
CATTGATTTCAAAGTTACAGTGTCaggtaaaaaaaagaatttctttctAT
TTTCAAACGAACATTAGGATTCCTTTACGTTCCTTTAATTAAACACTGTT
CTCTCGCTACTCAACGCCTATAATCTTGAGCTAACGAAAATCTCAGAATG
AGCTTCAAAAGAATCatgataaaatcaattttgcatCAAACGTTCTAACT
AACACTCGAGGGCTCAAATCAGGCGAATGTTTTTCGGattataaaaagat
tcgaataatagaaattcaaataaaatcGAGAgtctatagaccttttcata
aattacgacacgaacatcacttgcctcgttttcgaACAATTactatggtg
attatgtcccttgagacattaaatggtttttttatgaaaaaaatgtagTT
TCAATAAAATCCTGCTGGGAGTTGATCACCatgacaatattttcaaaaaa
aggcaagtgatgttcgtgacgtaatttatgaaaaggtataTTTTAGCATC
TAAAATCTTAACAGTAAAATAAACTCTATTTGATGCTCTATCTAAAACAA
GAACCAACgacaaccacaacaacaacaacaacaacaacaacaacaacaac
aacaactatACCTACTACAGAAAGAAGATATGAAAACGAGTTTACCCCGA
AGCCCAATATCGAACCAGTGGTTGGTTTAAAAAAGGAAGAATCGGACCCG
GTTACCGCATTTATTACATTGATAGTCGGCTGTTTCTTAGCTAGTACATT
GATATCATCGGCTGTTCTTGTGATTGCTTATAAAAGAGCACTAGCTCGCC
GCACGATGCAGTAAGTGCTTTACTCTATCTTGTTATATCACCTCGTCAAA
GGAATAAAACGAATGTTCCTTAAAGGTCGGGTACCCCAAATGGGGTACTT
ATTGGGGTACCCATttaatttacagaccaaaatTAAATAACCAAAAATCG
GCAACGGCATTtagtcaaattagtcccaataagggtcgtaaaattcacaa
aattacCCTTTTCTGTTCCTTTTTGATCCGACTAAGGGTCTGAGAGTCGA
AAGTTGGGCAGTACCCTCCCCCCCCCGTCATCCTATAAATCTAGtactaa
aaaaaattggaaaaaatctcttgggaaatttattttcataccttaaagtg
acggtggactaactaaaatcagtcttttaccccttggaaatttgaaaata
attttttaccccctggaaaacaaaaaaatactcttttagaccccctggaa
ttcaTGCTCAattaaccccctggaaatgttcgttcaccccctgtatggac
ataaaatggaatggcccaattttAAGCATAATGGGGAGAAACATTTCTTT
TTATAGCTGGTAATTTGATAGCTAGtaattaccttaagtggattagattt
tgcggggattaaatttggcgaatttggtgAATTAAAATCCGAccattcgc
aaaattaaatctccGCCAAGTTTAACAAAAAGAACATTATAGTATGTGAA
AAAATCACAGCTTTGTAGTATATTTCATAGTAAATGTCACTCATTTCAGT
GTCTcgaaatttccaattcgccaaattttaaaatccccgccaaaaatcgt
attttggccaatcactAAATTAAATCCtcaccaaaattaatccacttaag
gtattttcaaagaattaatAAACTAGGGATTGGGGTCTTAACAAGGTCCG
GGGGTcggaagaaaaatgaaaaattaacaagcggcgTGAGTGCTTatatt
aggcacctgagagcACACTGCAGacaattctttttaaaatttcatttcca
ggAGATTATCGACATCTTCAATACAAAAGGATTCTTACAAggatgatgac
gatgatgaaaGTGACGTAGAAAGTCGCAAAACAGGATCTGACAAAGTGCG
AAGacataagaaaagaaaagaggATAGACGATACTCCGATGATGAATGAc
gagttgaaataaaaaat

Gene-mRNA-Prot

The following transcript feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
TCONS_00063246	TCONS_00063246	Clytia hemisphaerica	transcript
TCONS_00063247	TCONS_00063247	Clytia hemisphaerica	transcript
TCONS_00063248	TCONS_00063248	Clytia hemisphaerica	transcript
TCONS_00063249	TCONS_00063249	Clytia hemisphaerica	transcript

The following polypeptide feature(s) derives from this gene:


Feature Name	Unique Name	Species	Type
TCONS_00063246-protein	TCONS_00063246-protein	Clytia hemisphaerica	polypeptide

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold_385	supercontig	scaffold_385:5870..15486 +

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.43	0.7	0.06	0.24	0.81	0.94	3.21	3.35	1.21	1.44	1.31	0.58	1.69	2.37	0.64	0.2	0.14	0.32	0.44	0.1	0.21	0.08	0.32	0.35	0.25	0.18	0.15	0.14	0.16	0.09

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XLOC_039634 (gene) - C. hemisphaerica