XLOC_038312 (gene) - C. hemisphaerica

Overview
NameXLOC_038312
Unique NameXLOC_038312
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_353:22744..32810-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_038312 ID=XLOC_038312|Name=XLOC_038312|organism=Clytia hemisphaerica|type=gene|length=10067bp|location=Sequence derived from alignment at scaffold_353:22744..32810- (Clytia hemisphaerica)
AAAATATCGCTTTCACGATTCCGTATAATGGCGGAATAATTCCTTCCACT TTCTTTTTAGTAGTTGGGTCAATTTTGTACGAAAAAGGAGCAACCATGGT TAGTTTTATTCTAAGTTTATCCACTCCATCAGCGAATACTGTACTTCTTA ACCTATCCACAAATTGAGAGCTATCTTTCTTCTATATCAGAGTCACACAA TTTTTGGGCGAAACTTTCTAGACCTACTTGATATTTTAATGTTTCGTACC ATACTATTCCATTTCAGTCTCTCGTACTTCCCGAAAAGTTCCAACACATC CTTCGTGTTATGAACACGAATATCGATGGCAAAACCAAAATTATGTATGC CATGACAAGCATCAAAGGTGTTGGTCGACGTTTCTCAAATATCTGCTTGA AGAAAGCTGATATTGACATGAACAAGAGAGCTGGAGAATTATCCGATGAA GAGGTTGAAAGACTCATCACCATTATGCAGAACCCACGTCAATACAAAAT CCCAGATTATTTCTTGAACAGAAAGAAGGATATCAAAGATGGAAAATACT CTCAAGTAAGTATATTTAATGCAACCTTAATATCATGACTACAATTCTCA TTGTTGACAGAGTTGGATGGCAATACGTATATGGAATATTATTATGCATT TGTATACATTAAGCAGCAGTTAATGGTTAACTATTTGTTTGAGAAAGCAA GAGTCACATAAAAATGGAGAAGCTGATAATCCCTTAGCTACAGAAACTGT TTCAGAGCTGGTGAAATGATGTTTATGATGATTTCGTGGATGTGACTGAA TTTATGATATGGACAAATTACATTATTATTTCTTTTTCCATGGAAAGATT ATTCATTACCTAAGCTGTGTGGAAGTGGAAATAGAAATATTTGGAGAGTT GTCTCAAGACAAAGTTACTTGATGTTGAAATTAAGCTTTGATCAATGAAT AAATTTTGCGATCAAACTGGTTAGAAATGAGATGAGAAGTGTTATTCTTT ACAGAGATTTCATCTGGCATGTGAATGATTGTGGCATTTTATCTGTGTCC CTTGGAAAGTTGAATTATGCAAATTCCATATTGATATTGTTTGTCAGATA TTTTATTTTACATGAATCCCAACTATGGAATGCTTTGTTTGGGGAATTAT TATGTGCATACCTTTCTACTTTACAGAACACAGTCAAAAATAAAGGGGGG TTTTGTGACATTTCTACCTTCTGTCATATCTGATACCATATCTGGTGGAA TTTTGAGGTTACCATATCAAAACTNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNTTTAAGAGGTTACTTCAATCCTGAGTAATACTTA GAAATATGATGTGGTTAAAGTGAGGTTACCCCTATGAGGTTACCTCATTC TAAAGCTTATAAGGGGTCTTCGACAAAAAACTTTCGAATTTTTTATCGGC ATTGGGCCGATAAGCTTCAGACCCCCTCCCCCCCTTGCTCTTATCGGCCT AAATTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNTACACCTGAAAGAATATGTGTC CCCTTAATCCCGCTGTTGTTGAGAGAAAATCTTCAAAGACTCGGTTTCAG GCATCAAAATTACTTTTGCCAGGGATATTATAGTTTCCAACATAACTCAA TCTATCTATGAGTTCATTAATAAAGCTGGGGAAGTCAACAATTATTACCC CCAAATATATTAGATTAAATCTAAAAACAAGACTGCAAGTCTGCAAGTGT ATATTTGATTCCGCACGTCCATCTTTAAAGCAGAGAAACGCTGATTTTGG GACTGCTGATTCCAGCTAAACCCCTTGTTTAGACAGCACTAGAATTTAGG TACCTTATCAGCTACAAAATGAAACCCTCTCTGTTAGCTATCCAAGGATA TTGGAATCAAAAAATGACGTCTTTCAAAATAATACAGACTAGTTCTAGAA ATAATTGCACGCCTAATCTGCACCTTTCTACAATTTTTATTTTTTTAAAG CATCATAATAATACTAGGCTCAGATTTGGAAAGAATTTAAGCAAATGCTA AGCATTTTCAGAGACTACATTTTGTGGATTTGGCTGGAATTTTACAGATG GTTCAATGGTACAATTTTCAGCACTTAGTTTTCATGCTTTAAGTTCAACA GTGACAAATTACCTAACAATCATCTTTTTATATCTTTTTTATTCTTATCA ATGACACAGCCAATGATGATTCCTTTTAAACCATCTTTCGTTTGAAATGA TAATGTAACCATTTATAATCTGAGGTTGTGTAAATTTCTTTATAATTTGT AAGGGAATCGAGGTCCTTTCTTTTTAATACTGGTATTCTGCTTTAAAATT CTGAATTGGATTTCGTTTCTTTCCCTTCAGGTATTGGCTAATGGATTGGA CAACAAACTTCGTGAGGATCTTGAACGATTGAAGAAAATTCGTGCCCACA GAGGTTTAAGACATTACTGGGGGTGAGTTTGACATTTTAAAACATACATA AGGCTAGCTTTGTCAGAAGCTTGTGCAAAAGGATTTTATTTACAATGATT GTTCCTTGGGTGTTGAAAATTTATAAAAGAGGAGTAGCCTGGTGTGACAA TCTGTCGCCATGGCTATTGGTCAATGGTCTAAATAGTATGAAAAGCTGAT CAAAACAGGGGGGGGTCAACATCCAGATACCAGACCCATAGCCGGGTGGT GGTGTCTTTTTTTCCTTTAAAAGTCTGAAAAGTCAAGTTGGTATTGATGG GGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGAAAGTTGGTATCCAT ATCAAAATGACAGCAAAACTTTCCTAATTTTTGCCCTTATAGCTAGAAAA TACCACGGGGTACATATCAGTCTAAACAGGTTTCAATTGGATTTGTTTTA GCTTTTGAGTATAGTGACTGTAAATGAGTAATAAGTATAAATGACTTTGA AGTTTGTTTATTTTGGACTTTTTTGATATTTTCAAGTTTTATTTTTGATC AAGTCTGAAGCAAAAACATTTTTTCTGTGATAGCATTTGGTAATGAGTGA ATCTATTCTGTTCTAAAATTATGTACTAATAATAGCTTCTCCTAGTTTTT GCACATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNATTTCAAAAATGAGTTTTTTTGAAGTTTCTCTTAG TACCCTGTTTGTGTGGGAGGGGGTGGGTTCCCTTTAAACAGCTTTAAACT CAAATTTGTCAGATTGATATTGGTACTAAATTAGGGGGGTGGGTCCCATG ATATTTTGTCAAATTCAAAAAGTCATATTGGTATCGATACCAAATTAAGG GGGTGGGTCCCCCTTTTTTCTGAAAATTATGATTTTCAAGTTGGTATCGA TACCAAAATAAGGGGGTGGGTCCCCCCTTTTTCTGAAAATTATGATTTTC AAGTTGGTATCGATACCAAAATAAGGGGGTGGGTCCCCCCTTTTTCTGAA AATTATGATTTTCAAGTTGGTATCGATACCAATTTTGGGGTGGTGGTGTT AACTTAGCTCAAAAGGTCAAAAGTCAGGTTTTTGGGCTATGGGTTGGTAT TATAAATGTTGACCCCCCCCTGATCAAAAAAGAAGTAAAAGCATACTAGC CGTCCCAGCGTCATCTGAGACAACTTTTCTCCTTGAGCTTTGCTTGCAGT CATTCTTGATGAATTAGATGTATTTTTACTTTTGTGAGAAATGAGTAAGC AACATTTCTTTTGACTGTTCAGTTATGACTAAGTTTATATTCTCAATTAT AATCAATAAGCATTCCATGCAACAGGTCGAAAGCCACAGACCAGAAATCA TCTAGTTAGCAAATTATGAAATCATAAAAGTGCGAATTACACGTTTTTTT TTTATAAGAACGTCAAAAATTTTCGAAGTCTTCGGATGTTCTTAGTTTTT TGGATTTGAAGCCTAACAAGAGCCGCAAAGATGCGGATAAATATTTCCTT TACAAATGTTAAAATAATAATTGATGTCCTAAAAAGATTTCAAAGTGCTT TAAATCTCAGATAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATATTTCAC AGTAAGAAAACCAAAGAAAATTTTATATATTTTCAAAATGAGATGAAATA TTTTGCATTATACTTTCATATAAAATATTGTAAAAAATGTAAAAGTAACT TTCGGAGTTTTTTGAAATAATGTACGTGCTAAAAAGTAAAAATCTTTCAA AACAGGGAAAACAATTTCATGTTTTCCACGTTTTGAATGCACGTGTAACA AAATCTCCAAATTTATCACAAAAGTTTCCACGTTTTATTAAATGTACATA CAGTACATACCGCCAACTGCTTTAACTTGGGACGATTGGTCGAAACATGG GANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNACTGTTTGATATCTGGTCTGTA TTTTCACTAACTTGTTAAATCTCTTTGACAACAAATTTGTTTTGATAACT CCACCAAATTTATCAATCATACTTCCTTTCATAACATGTCACGATAACTT TCACTGATAGCGCCGATTGGAAAATTAGAGAACGCCCGCTGCCTAACCGC CTATCGCCTGATGGGATTAACAAAATAACGCGTGTGTAACTTGCCGCGCT CCATCGTTTTGCCATTTTTTAATACGCCGTTCATTAACTCAAATCAAATG ACTTTGGAGGTTTCGGTGAAATGGTGGCCAAATTGCCGTCCCATGTTTTG TCAGTTAGTCCCAAGTTAGAGCAGTTGACGGTAAGAAAATCTCCAAATTC ACGACAAAAGTTTCCACGTTTAAAACACAAGTTGCAAAAGATCTCTAAAT TCACAANNNNCAACTACGCAGCTCCGCTCGCAGCTCTACTCTACCATTTT TGTATTTTAATGACCAGCTGGGTCTTTCATTTGAGAGCTATGCATGCTAG CCTCCAATGATGCAAGTTACCCTTTTTCACGGTAAAGTTGTCCACGTTTT AACAAAATGCAAGCAGAGAGAAAATCTCCAAGTTCAAGAAAAATTTTAAG TGTACATGTGAGGTGATATCAAATTATTTACATCAATATTCAATGCAATA AACCTTTTAAGGGGGCCGTGGTGTTCCGGATCCGGTATTATCAGCTTTAA AATTTGAAATTTATAACCGCAACGAGTTTTCACTAACTGTCACTAACCCC AGCAGTTAATCAGTTAATTCATTGTTGTAGATAAAAAATCCAAGGGAAAC TCGATCAATAACCAGTCAATTTTGCTCCATTAGAGTTAAATTTTTAACTA AAATCAGTTCATCAACCATTCCCATTGTTGCATTGTCGGCATTTGCATTC GTTGGGTGCAAACTCATATTGCAAGTATGTAATTTTTCAGGTAGTCTATA ACATGGTCAGATTCATTAACAGTCACTTGCCTTCGTACGATTTATGTAAA TATACAAACAAAATTGAAGTTATTTTGTTGTGAAAGTTGATAAAATGTCC TGTTTNAGTATGGTCCGATCAACAATACGCTTCTGAAACGGCCGACGTTG CCCGATCGACAAGGAGAATAGAGGGCCGTACGGATATTTACCACAGACCT TTCTCGAAGAAATGACGTCTTCCGCCTCAAAAAAAGAACATTCTACTGTT TTTACCACCGGAGCTTGATTTAAAAAGAGACTCATGTACAAACTCACGAA ATTGACCAAAACCGAGCGTTAGACTTGAAGAAGGAGAAGGAGAAAAATTA CCGTTTTAACAAATATTTCCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTTCT TAAAATGTTCTTATTTTTAGCATTTTTTGAGCATTTTGATGTAATTTCTT AAGAAAATGCATGTTTTTAAGTCTCCAAAGCCTTAAAATGTTCTTAGAAT GTTCTTAAATTTTTGGGCCTCGAAGCCTTATGTTCTTATATAGTTTGTTC TTATAAAAAAAAAACGTGTATGGCGTCACTCAGCTCCAACTTGATTTCTG ACTTTCCTTTTTCAAGTTAGAGTTAAATAATTTTTTTTTTCACAAAAAGT TCTTTGAGTTATTAACTCAGGCTTTTTGTAGAAAAAAAGTTTAAGAGTTT GGTAACACCCTGAATTTTGATCTTTCTTTTACGGGCTGCATCGTTTGAGG CGTGTGATAGCACGCGCACACCTCCACACACACCTAAAATCTTTGAGGAG AGTGATTAATCACACGCCATAAATTTGGATTTTACTACTTAAAGTTATGC ATAGCACTCCTTATCACACGCCTAAAGTACTTTTTAGGAGTAGTGCGATT GACCACACGCCTGAAATTTTCAAATGACAAAGCCTGCTTTTACACTTAGG GAAAATCAACAATGAAACCCATTGCAAAAGTTTAATGATTAAAGGATCCT CACAAGTTTTAACCCAGTTACTATATTTGTCTCTCAAAACACATGTTAAT TTCTAATTGAAAATTTGTTGACATGTTGGCTGTTCCTGTAAAAGCAGGTA AAAGATGCTTTTCCCCAGAAACACTGCATTCCACCTGAGACATACCTTGT GATGATTCTATTTTACCATCTTTCGTTTGAAATATTTATGTAACCAGAAT TCTTTAACTGAAGGTAATGTCTCAGTCGGATTATAATAGGCTCCACTGAA AAGTAACAAATTTCATGAAATTCATGCAAATTTGGAACAAAGCATCGAAT ATGGACCAGACTTGCCTAATACCCTATGGATTGAGATTAAAAGGAATTGC CTAGAATTTAAGGCATAGTCCCTATTTCTGGACATATAGTGCACAGCCTA TAGGTCAAATGTTTAAGAAAATTTCAAACTCCTTTTAGGCCAAAACCAAT CATAGTATCTAAAATCTTGCGCAAAAACTGTATAGGTACTGACTGAGAGT TATTTGAGTGTCAATTCATGACCTTTTTATTATCAAAATAGAGAAAATCA CCACTTAAACATCATTAAATAAATCCCTGCTCAGTACAGAAATTGGCGAT ACTGCTTAATAATCTTCGATGTACTAATTTAAGACTAAGAGCTTTCAGAT CCTATAATTGGTTTTGGCTTGAGATAGTTCGAAATTTCCACATAATTTGG GCTCTTGGTATTTAGCCTAGGTCTTCAATAAATATGGAGTTAGAAAACAA TTCTAGTTGAGAAGTTGCTAGTTGCTACTTTCGAGTTTCAGTTGGGAAGT TGAATAATTACCGGCTACCGAAAAAGAATAAACATACATCAAAAGTACGA TTTTGAAAAGTAAATGTAATATGAGAGTAATATATAACACCTATCATATG CTCATTTCCCTTAAACACGTGGGCTGAGAGCATGAAAAGCCATTTCCACC GTCAATTCAGATCCATTTATACTTCCTGCATCATATTGAGTATAAATATA ATTCTTGTTGTATTTTTGTAATGTCATCAAAATTTTTATTAAAAAGTGTC AATTCCAATGATAAAATGACAAAAGAAAGTGTTATTATTTTTCTAGTTCT ATAAACCATCTCTACGAATTTTTTCGAGGCTAAAATGACCCTCAAATCAT ATCCTTTTATACAATAAGCATCACTTGCAGTATCAATATTTTTTTGGGAA TCTGTTTGACAATCGTTGTATTTAAAGGTTTTGTCAATATTTTACAAAAA CGTGTCATGTTGTCAGCCAATGCCGATGGCTTCCCATATCAATCCACAGG GTATTAGTCATGTCTGGTGTTTGTTTCAAATATGTACGATTTTTACCCTG ACTGTAATCAGTAATTGTCATTAAGGTCGGTCAACTTGAGAATTTGAAAG CTCTCAAGGTTTTCTTAGTTTTCCAGACTGATAAGTGTTCAAAGAAAATT TGAGTTAGCTGATTGTGACACAATCTCTTTTTTTTATTTTTAGTCTCCGT GTCCGTGGTCAACACACAAAAACAACTGGACGTAAAGGAAGAACTGTTGG TGTATCCAAGAAAAAGAATTAATTTCTTTTTGCAATATAAAAAAATCGAA AAAAAATCACAAATGTCTCTTTTTTTGTGTTTTAGACAGTCAAGAACACC ATCAAATTATACCACAAAATATCAATTGCTGACGGGATAACAACAGTCGC GCTTTCTTTAAATAATA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00061029TCONS_00061029Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00061029-proteinTCONS_00061029-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_353supercontigscaffold_353:22744..32810 -
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
RPS1840S ribosomal protein S18 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1776.7 1674.88 1963.79 2027.56 1659.34 1277.11 1791.76 1865.89 2336.95 1879.56 2218.06 2914.95 3195.86 3054.06 2868.93 2736.5 2902.51 3207.16 1567.23 1863.9 3332.49 3041.98 2598.19 2464.69 2454.86 2441.83 2794.38 2777.57 2048 2105.38