XLOC_037560 (gene) - C. hemisphaerica

Overview
NameXLOC_037560
Unique NameXLOC_037560
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_330:441371..451484+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_037560 ID=XLOC_037560|Name=XLOC_037560|organism=Clytia hemisphaerica|type=gene|length=10114bp|location=Sequence derived from alignment at scaffold_330:441371..451484+ (Clytia hemisphaerica)
TTATAAACTACTTCCTTATGGGTTGCGATACAGTGCATCGAAGAGATATA
TAAAGCAGAATAGCCATCTTTACTTGCTCTTAAAAAATGGAGAAAGCCGA
TGAACAGTGGGTGCATTTgaatttttaattaattgtccaaatgaaatgtc
tttaggattttaattttggctttttatTGTTGCCATGAGAGTTTTACTAA
CGatttgttttctcttttcgaCTCTTGGTTATTTGGCTGCAGGTGAGACT
ATGGAATTGTATTGAATGAAGGTTACGAACTAATACCATCTCAGCTCCAC
ATTTATGGCTGAGAATATCTAAAATATTAtcttattttgaaattgaatta
aATGATATTGAAGTTAGGAGGCAATAACTTTGTCGAAAATCGACTCTTTG
AGTCTCAACTATCTAAGTACAAAATTCTATTTCAGGTTCATAaactattt
ctatttctttgaCTCTTTATTCGCTCAGTAGTCCAGTCATCCAAGCATGG
TTTCCACCAACTCTCGCACTGGTGGAAACCACGCTTTAAGCatatattct
cagttgttcttaTTGTTCTGAGGTTGAGTCTCGTTGTATTTTGAATCTTG
TAACCTCCAACAAGCAGTAATTTTGGACTAtcgtttgaatttttgattga
tGTAATGCTTTGTTCATAGCTTATATTTTCATTGTCAGACTGCCGGTCTT
TTTATGCTGTtgctaaaataattttattaatGGATGGAAAGCTTGAAGTA
TTTCGAACTTTTTTGCTGTTGTGTTCTTTGCAAAACCCAAGGCAAACTCG
CTTGACCTTTATTATACGCTTCTGTTGTAATAGCTAACCCTTTAACTTTC
GATAATTTTAAAAAAGGTCTTCATGTTAACATCCTAGCGACCAATATGAT
ATTTGACTTCAATCTTCTAGGACATCAAGATAGCATCCCTCATCGAACGA
ACGTTGTATTCATTGTTGACACACATGCTTCAGAATCACATCTAACACAA
GAGCTGGTCTCTCAAGTTCTCGACACCATCCCTTTAAAGAAATACCGTAT
CGGAATATATTCTACGAATGGGCTTTCACAAAAGATCTTGGAATTCCAAA
CTCGACAGTGCTCTGGTAGAGTATTCAGGTATTAGTCAACATCTTTAAAG
CCTCGGCCCCGCGCAGCCATACGCACTACGCAATtttatataccttatcg
gggaaaacttcgtcggggaaaagtgacgaaattttggccaagtgacgaat
atttttccccgacgaaaattttccccggcctcaatgcgtttaccaactaa
cagcaagtgacgaatatttttccccgacgaaaattttctccgACGAAAAt
cttccccgacgaagttttccccgataaggtatcatCAATAACAGATCTCG
ATAAATAATAATGTAAGGAGAATGAATTCGTAGCCTGGTTATGTTGCAAT
TCCAAAATAAACTAATTGAAGGTTCCTATATTTTCCCAGATAATCCAATA
TTGATGGTCCCTGAGGAAGATGAATAGGATGACttcgattttgtttttca
agataGCTTGGTGATCTTCTTGACATATATAGACTATATATAGACAAACT
CGTATCTTTACTGAGCTGTAGATCCGATTTCCAAGCCCCTACTTTTTCAA
AGATCTTATGTTAGACAATAACAGGGTATTATTAAAGGAGAGGTCAGACT
GAAGAATGGTTCAGGGATCTACGGCAAGTTTAAGACCTGAATAATAAGAT
CGTGTCTGAATAAATACACGGTTTGCTTTTGATTTAATAACACCAAAGTC
ATTTAAATTTGACTGAAAGTGAAACCAGTTAAGACAGATTGAATTTTGGA
GATTTGCCAACATCAACAACAGTTTGGCCTGGGTTtgcatcaaaatttta
attagaAACTTGCAATTAATTAAACACGTGTATTGTTCTTCATAAGTTGA
AGAATTAACAgcctcgttatcatgtgataaTGAGGTTTTAACTATCCCCT
TACCATCAATTGGAAGAAGTGTAGAGGTGATTAATTATTCATGAATTGTG
TCAATATTTTcgaaaccaaatgtttcatctCGAAAATGAGCTTCCTTGAA
CCCTCGACCACACAAAACTGGTCTCTGCTAATTGGAAACAAGACATCACG
AGGAAGCTTTAATTAAGCGACCCTTCTTTATCCACATCTGTGTACAAACA
ATGTAGTTAACTCTTTCTGATACGAAATTCCATTATATGAAACTGTTTTT
ATTCTCAACCTAAGCCTTATTtgacaattccttatttttggaatcatttt
cagcctcataaACGTGTCTTTTATAAAAAACTGTACTTAAAAAATGGTAG
TAGTTTCTGAAGTTAGCATGTTGTCCGTATATTTCGGAACCTTGGTAAAT
GATTTTTGGATCCCTGTTAAAGTTACAATCAGAGAGACAAGCTGTTTAAG
TGGATCAATTTTATTGTAAACCGAATTTCAAACGATCCATAAGTTCAACC
AACTAAACAGTTATACGAGAAAGTTATTCTCGATTGTAGCTCGTTCTtat
ccaatcttttttttacattcGCGAAGAAGTTATAATATCGATATCCGCTT
TTCTGATAAACTATGCAATATGCTGATAGCAATGAGTATTAAAGTGAATA
TTATTTCCTGTGATAATATGCCATTAATTGTTGATGCATAGGAAACCATT
CTTATACACgtacccttctcacagacccggtagtgGGGAATAAAAAAACG
GATTGAAACTTGACGGGGATTAATATTTCCAtgcttttatggctggggat
tagaattccattgttttcaagtcagaaaattcagtgaggatggAAAACTT
ATCACAATATTTTGTAGTGAGGATTTGCTGATCTAATCATTTTTAGCGGG
GACAAAAACTAGAGCATAATTTTCCACTGAGGAAGATGTTTTGGCTAATT
TTCCAGTATGAACGGGttccactgggtctgtgagaatgggGTGTTCTTAT
GAATTTCCTGATCCTCCCAGTCGTACGTGATTgatgaaatatcttttgat
gtgATAGCGTAATTTTCACAGATATAATATTCTTTTACACACTACATAAA
CTAACTACCCACAGATTTCCCGTGGAAATGTGTCCAGCCGAAGTCGGTTA
GTCCGCTATGTTGTTTTCCAATTTACCTTacattttcgaacgttcgattt
tTAAAATACTGTTGACatagaattgaaaacaagacgACGGACTAGTCAGC
TCTAAACCTGGACAAGCTTCCTATATACGGGTagcccgatccagtcaagt
agttagagaTCAGTTTTAATGTCAGAATATTTTTTGGTGTGATGGCGTAG
ATCAGGGACTCACCTGGGGGAACTTTCTTTTCAGAAAGGAAATTGTGTGG
ATCCCCACACATCGACGATTGATGgatatttttttacattttgataGGTT
AAAAGCATTTATTTTAACGGGATgaatttttgcgggaattaaatttcgcg
gattttgcggatttggggtgtcatctgcgaaattaaatcccagTGGACTT
ATGGTGGTCATCTACTGGAAATTCGAAAAATCAGACAGAAAATCGAAACA
ATCATATCTCCATATGTAACTAAAAGTGATATAAATGAAACTTTCAAGTA
TTATTGTATATACCTTAAATCTTCTAAAAAACTTACTCAAAATGAgttca
aaattgaatatgatcatttttcatttttcaaagtttttgtcCCCCCCATC
GCTTAATATCTATAAATTGCCTTAATTTTTACTAAACACCCCATGATAAC
CAGCCTTTTTGATAGATATAAATCCCCTGAATATCCGATATCATTAGGCA
CATGCTTTTGTAAAGCCGTTTAGTGCAGTCATCTCCTACATTAAGGAATT
AGTTTAGAGGAGGAAGCATACAATTTGTTATGAAAAAGAACTGCTCgtaa
aatttgtaatttcctCAGCGGATATCATAATCGACCAGAGTTGGCGATAA
ATTTCGCCATGAAAGCATTTCTTAATTTATTTATATACAAGCATTGCGTC
ATAACAGAATTCTTTCATATTTATGTTTCCTAGATTTAAAGTTCGACAAT
TCGAGGTAGTTTTGTTTCATTACAATTACAAAATGATATAAAAATTGAAC
ACCATTTCCGACTTGTTTATATCATAATTGAgtattgaaaatgatttaaC
CCTTAGTTTTTTATTAAGGCAAATTAGGTCAAACTTTGGAATTGAGTAAA
AATGGAATTCAggtatttttttataacttaATTCAATGCAAATCGCGAAA
CTTTTCTGAGAAATGTGTTTCACGAGTACTAAATATCGCGATTTCCACTT
TCTGGAATTttatttcgcgattcactaaatttgatatttttgtaaaaacc
tgATGTCCCTAGGTTTCAGAGGGTTGTATTTTTAGCTGGTCGGTCTTTAG
CAATAATAGTCGAATCTTGATTTATTAGTTTACATGCTTCTTCCGTTCAC
TTTAGATAATTATGAAAAGTAACTCCTCAAAAACGTGAGTTCACAAATTT
AAATACATGGAAGACCACGAGATAATCACGTGATCttagaataataaaaa
tatacaaagaaagaaaagataaaagataattatgcgaaatatgctaatta
tgaaaaattatgtaatatattttacaattttcaataaaaatggttaaaac
aagagagagactgattttgcttgaaacatgACGTATAAGGTGCATTTTCA
GTCTTAAAATGAAAGCCgtgaaaatgtaattttttcctttttctaatctt
catttttgaacattttcaagaGCGCTTTCCAATCTGAAAAAATTGTATCA
TGTactttttccttggaaaatacaagaaattgtattggttgattttcctt
caaaaatacaagaaggATTGTTTATCTTACCaaataaaagaaatgtgttt
tatctaattttccttggaaaatacaacaAATTGTTTGGAGTCATTTTCCT
TGCAAAATACAGGAAATTGTTTTAATCAATGTTTCATTCGATAACAAGAA
AATAttgttgttcattttccttgaaaaatacaagaaatcatttattttca
actctgaGACTTGAAACTATCAGtactgaaaaataatttcactACTTCAA
CAATCATATCAAGTAATCATTTAAATATTACTCATAAGTTAGACATACAT
TTTACCTCGATAATGacagcgagcgaagcgagcttATTTATTATGTTAAA
GAGTCGTCTCGGACGGCGCCGGGACGGCTAGTGAGTTATATTGTGTTAAG
TCAAGTTAAGTCACGTCGAACCTTCTCACTAAAATAATCCTTTCGTTTCA
cctttagaaaaacaaaacatcgAGTATCCGTCAACAAAGTCTTATCCGCA
GTCTACAAAGATTTGACCTATTTCCGTAAAGATCGAAATGTTCTTGTTGC
TTTGACGTCACGTCGATCGTCCATCCATCTGCGGAAAAGCCTAGATCATT
TAGCACGAAGATTGCAgagaaatgaagcaaaatatgtTATTCAGTTGAAG
AAATACCTTTCAGGGAAGGTGAAAAGTTTATTGTGGAAATCAACTGGCCA
TTCGTGGCGACATACCAACTTTTTAAGTCACGGTGTgagaaatttattga
aaagaatttaCGGCTTGTTTCATTTTACCAAAGGTGAGAACTCATTTCAT
ACCCagcaggcacacaacgttattttaggcgtacaaactttcgcgagcag
aaactttcgcgattttcgcgaattttggcccttttcgcgtaagtaaatgt
ctttaaaaattctaggaagggccattcgcgaaagtttatgctcaatTCAA
TTCAGCATTGCGGACGAAGTAAAactcagaataaaaacatactggtttaa
aatatttcgctCTCTCTTAGAGCATCTTCAGTTTTTTTNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNCCCTTCCGAAGTCTTTGTTGAGACCTGATGGAGCCAG
AGTTTGGAGTCTGCACATCCATTTATCTTCGGCTCGTTCTCTTTCTGCGG
AGGATGAAAAGTCACACACCGTGTGGTAAATGCAAGCTATGCCCGAACAT
TGTCACCCAGTCAGAAATCACTCACAATGGTATCACTAAACGTGTAACCA
ATGGTGGTAGCTGCAAAACGAAGANNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGTGTACCAGATGTT
CCGTGACGTCAAAAACTGAAGAAGTCATTGTAATGCCGTTCTAGCGTCGT
TAAATATAATTGTTAAACGtctttgttattcaaaaaaaactgaagatgct
ctaagagagagcgaaagtttatgctcgcgaaaaattcttgacaaaataga
aaatctgtaaaacttcaaactttgaataaaatgtaacttttatggtactt
tttagcctgctaaatgactaataagtcaaaggacaaatgtttcaagccaa
tccaagaagtatttgtctctctaagccattttttcatgtgaaaattctca
attNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNgaaaattctcaattttacgtcttgattcgcgaaagttta
tgctcgcgaaaaatatttttctgttaaattcgcgaaagtaaatgtcgtga
atttcgcgattttacgtcctcgcgaaagtttctgctcgcgaaagtttgta
cgcctaaagtattttccaacgtttatctaacgttcacaacgtccatctAA
CACCAGACTAACGTTCAattaacgttgtgtgccatccGAGTAGGATGATC
CAGTTGAAGTCgtttttataatttcttttggGTACACAATTCTTGTAGTT
TTAAAGTCCCAAACAGGTATTAAAAGAAGTATTATGTTTGGTTACTTTTC
TAGTCAACCTTCTATCATGCACCAACCCATCCAAAGCGAGATACGTTTAT
GACGAGTGCAACCGGCAATGTCAATGTGTGAACGGAAAACTGGTGAACTG
CTATCGTGTCCGGAAACAATTCTCCGCGTTACCTCTGTCCGAAAGACTGC
ATTATATTCGGACGTACAAGTTTGCTGCTAACGATAAGAGATTCCAAAAG
AAGTTTTACGAGATCGTGATTGTTCATCCGACGGTCAATTTCGATCGGTT
GCATTCCCCAGAAGAACTCTTCCCTTTCCATAGAAAGTAAGTCAAACGAA
ACAAATTAAATATGTTGTTCTATGGACGAATCGGACAGATCGTTGGACGG
TATGATAAGAATAAGTTTTCAGTAGGAATTTAGGGTCGGCAAAGtactaa
aaaatatttgttgaatCTTGTATGGATCTAAAATTAATCTATCTTTTAAT
TCATACTAAAAACAAGAATTGCTATGTGTGGTGGAGTGCATCCATAAGTT
TCTACTAGTTTCCAGCTGACACACAGCGTTGTCTCGGCGTTTATATAACA
TtattgaaacaacattgtgtgtcAGCTTGGTTTGAAGtaatttcttactt
ttttttcattatataGATACGCACTAATGATGGAGAACTTATTACGGCAA
GTAGATTGTCGGATTACTCTACCCTTTTGGAATTTCGCGTTACATTCAAA
ACACATCTACCAACGTTACCCTGGTTACCATATGTGGGACGCGCACGGTG
GTTTCGGTAGTACCAAGACCAACCTCAAGGGAAAGTTTTGCATCAAAGAC
GGCCCTTTCCGATGGCCTGTGTTCAAACTCCCTCAGTTTTTCGTCAACAA
AATCAATAACACGGAACGCCGGAACGGAGCGTGTCCGGATACAAATGCTA
AGATTTATCAGAAATGTGATCGCAAATTACGGAAAGTATTCAACCCACGC
TGTATCTTGCGTTCTGTGTCTCATAACGAAAAAACACCGTCTTATGAGAA
AACCTACAGAATTCTTCATGATCCGAAAACCACCTTCGAGAAGTTCGAAG
AATTCATCCGAGCAGATTGTCATGCCTCAGTACACGATAACCTAGGTAAA
TAAAGTTCTATGACTTAAAGCTCTCTCTCAGCCAATCACTACTcccttaa
ggggattaattttcgcggtaacttattttcgcgagacaattttttcgcga
aataatttaattttcgcgggacttattttcgcgaagacgggaattctaaa
ttttcgcgaggattaaatttcgcgagtttcGCGAGAAATGGGCTTGTTTT
TTGTTAAACAAAGGgaaattatttcttaaaaacccCTTAAAATTACGTTT
Ctctaaaaacttaattttcgcgaggattatattttgcgaatttcgcgaat
cgaaaggtttttaaaattttcgcgtggattaattttcgcgaatttcggaa
aaactcgcgaaattcgcgaaatataatccccgcgaaaattaatcccctta
aggtagTCAAACCGAATATCAAGTATCCTAAGAAATTGCAATTCGCTGGA
GAAGGGTATAAGGATAATAATAATTTTGTATTCTTTTCCTAACATCGAAc
attcaaaaacaataaaaattagtCATTAATCGATGAACCTCATGATTGAA
ATGCGCAAATATATTTCTCTTTCTTCTAGGTGGTGATTTTGGCTACGGCT
TCTCTAGTCTGTTACCAGAGTTCTTTCTTCTCCATTCCATGATTGACGGT
CTGTGGGCGTTCTATCAAAAGCGATTTCCAAAACATAGTAAAAAATGGTT
GCATGATAAGAAGAGGCGGATCGTTGGATATCATACACCACGGTTCTGGT
ATGTTGATATCCACAATATTGAAAGGTGtggtttaaaaatcaaatacacC
AATTTATTTCCCAAGAAAGTTAACATGAAGAAAatacatcatcatcatca
tcagcaTCATAAATTCAAATATCATAATGGCGGTAATAGCTACGATATGT
CAGATCAGATCTTGTCTGAAGGTCTAGAAGATAATCTTTATGACGGAGAA
CAGGACTATATGAACAAGGAGGATTTAAACCAAGATttatttgatgattt
tgattgaatttatttttagtaGAGCAATCAGTagaatcttttgaaaatag
acGACATTGTCTTGTTAGATCCGACTGACATTTCAACGCGTGGAGATAAG
TCTGCGAGTACTTTCGAACGTTAGTCTTGATAAGGGTAAATTTAATACAG
TTATAATATAAAAAGCTATTCATCAAAAGGAAACCCTTGTTACTTTCTCG
TCTTATGGGggttaatttgttttgttttgggttTTTGTATATTAccattt
ttattgaattttttgttaCTAGAAAATATTAAATGCATGCAAGAATAATA
TATTTTACGGAGAATTTCGAGGGAGGCTCAGAATTAATTAAATCAAGCGC
ATTGTGGTACTTCCCCCCTTTTGAATGTAAATCCTTACCCTGAGTATTAG
AGgtcgagttttcaaagaatatatcaacctctgaagaccaataatagaaa
ttttatcgcgcatgtgtcaatctaattactgtagaaagaatcaaagatga
aaagCAAATATTAA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00059707TCONS_00059707Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00059707-proteinTCONS_00059707-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_330supercontigscaffold_330:441371..451484 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
4.33	4.49	1.92	1.45	1.29	1.35	8.81	10.54	91.67	71.62	33.09	51.88	37.89	38.41	91.32	41.24	4.12	7.48	1.74	1.56	1.43	1.11	2.19	2.31	1.61	1.64	0.74	0.56	1.2	1.12