XLOC_037058 (gene) - C. hemisphaerica

Overview
NameXLOC_037058
Unique NameXLOC_037058
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_314:140023..145917+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_037058 ID=XLOC_037058|Name=XLOC_037058|organism=Clytia hemisphaerica|type=gene|length=5895bp|location=Sequence derived from alignment at scaffold_314:140023..145917+ (Clytia hemisphaerica)
ATCAAACCTGCTGTGAAAATGATTTCAGCCATTTAAAAACCATGCTTAAA TGAGCTACCAAATTTTTGACCCTTGGAGCGGCCATTGCGGGCTCACAGCA TACTCCTGATGGGAACAgtgcacaaaaacaaaaagatcagATCAACATGG CATCAAATTATTATGGTAGCCTCAATTTGTGGCAATCCATTTTCAAACCA TTTTCATTGTTGAGTAAACAATTGAAGAAGAAAGATGGTCAAATCATTGA GCTTGTTCGGGGCTCTGGTGTTATGCTGCATAGGTaaagaattttttaat aaaCTTATAATGTATATGCATCTAGTTAACCTATGTCTTAAAACCTACAA TAGCGAAAAAACTTAGCACTGTAAAACATCCATGGTTATATGCGTGAAGC TTTGAGCCTTGATTCCtatagtctagcatgctagacgacttaactcagta aaaaataggaagtagaaaacttgtcaggagcatcaatatagtcgtctaga atattttgtgcacaacaaacttttcataaaaattctcttttttcatgttt ttggataacattttcagggggtcttgttggtttgttttggtttgtttttt ttctttcacttagaaattctcgttggctgaaatttttatttgtttatgta ttttgttgtatatgattgttttctcaccccgcagaaatctgcgggccctg ctggaactcccgtaagctacggaaaccaccttagcccagtcgtttatttt aaccatatcccgacataaaaatttcccgctttcaacaaaaacgttataaa cgactggattcccagtctatgATTCCTATCGCTGTAGAACTTTGCTTAGC ATAAGTGGCTAGACAACATACGGCGGACAAAGTTACAATTAAATTTTGTC TCTATATATTTTGCATCGGAGACAAAAAGCTTTTGATAGATTTCGGATtg aatagtgtttttttttttttgcttgttgaaaagatattgaagagtggaat atcatcaaaaagaaaaacaattaaaaaatatcttagatttaaaaagaagc agaaaaccgctatctaattcaaattctttcaaaagttataaccTTTTTTG TCTCTGCTGCAGATTATATTTAGACAGACTTTAGTGAACATGGTCATTTA AACAAGAACGCGTGGTTATCCATTTTACGGCAGCCTTTAAAATTTCATCT TACTTCTAATTCTCATTTTAGGAACTATCAGTGCACAACACTCTGTCATC GGATTTTGGAACGcgaaatcgaaaaataaaaacaatttggcCAAAACATG CGAGTATTCGCCTTACACAAAAATTATTGTGGGATTTATTGAATTCAAAA GTAAGTCATCAAACGTTTTTTTATTCATATGCACTATTAAGCAGTTTTGT CTGTTGCTTCCACACCagtaaacttttcaaaacctcTAAGAAGCAATCTT TCTTTAGATGGAAAACCAATGCAATTCAAATGCAAAAATTCTATTGGCCG AAACCAATGTATCGATATCTCGGTTGGGATTGGACGATGTCATGAGCTGC AAAAGCAAGTTTTATTGGGAATCGGTGGTCCTCAAtcatatttcaagaaa aagaaGGAAGCAAAAAAGCTAGCCNGTTGGGATTGGACGATGTCATGAGC TGCAAAAGCAAGTTTTATTGGGAATCGGTGGTCCTCAAtcatatttcaag aaaaagaaGGAAGCAAAAAAGTTAGCCAAGAAAATTTGGATGACGTATTT CGCTGGTCAGGGTCATGTTAAGACTAGACCATTCTTAGGGTAAGTCTGCA TTCCTcgccttttttttttttatttgtaagGTTTGACACTGAATAAAAAT AACCGTAGTAAAACATAACATCGGAAAAAAACATGAACAAAACCCCGGGG GCACTCAAGGTCAACGTCCTACCGTACTTTCCAAGCTTCTTAAACTTAAA GTGCACTGTACGGGTCGAAATGAACAAGATGAGAAAAAGTGAACTACAag ggtgcaaaatttgaaaaatctgaccATGTTTCGCTTAAAAATGGTCAAAT AATTCCTAGAAAATACAccataagggtcgattttcatccaaacttattca aattttgctaaattttctctgcactgtaaggttccgatttcaaaggccta attttgtaCCGcgcgtacggtcgttttcaatcgggtgccccccccccccg gaaaaaaaatcaatagtATAGGGACGACTTAATTTAAGAGAGAAGAATAT AGCAAGGAAAACTGAATCATCCCGTAACAGATCCAATGCAAAATGATAGA TATATAGAGAGaatacatcttttcgaccgtagccgccgaTTGCTGCACAG GCGTTCTTTTTCCGTTTTACCCTTCCTAAActcaatccaatccttttttt acactttgtttattgtctataggtgcaaaaaaaaactgggtcggttttag ggtggtacaacggacaaaaaaatgcccgcgcggtaattggcGGCTATGAT CGAAAAAGTGTATAGAAAAAGTTTTCTTCTCATTTTACTTTAGAGAACGA TTTGATGGAATCAACTTTTACATGAGTGGTGTCCGCAACAAATACTTTGA TGTTTTTGTGAAAGAATTCAACCGTCTGCGAACGAAGTCATTGCTGGTTG GTGTTCTGATTACCATCTCACCAAGCTGTTCGACTTATGAAAGATATGGC GATCCTTATTTCAAGGAGACTCTAAAAGATAATGATCTCATGGAACATAT TGATGAGGTAAGATGAGCACCACTGGAAAATGTCAATTCAAGGAGACGCT TCACCTACAAAATTTCTATAAGCCCTACCGGAAGTGGCAATCTGTTTTTA AAAATGGAGAATTAGAAAAAACGATATCTGCTCTAATCATGATCTGATCT GTTCTGAACAGTGAAATCGGCaattctagttctagttctaaaaatttaaa attcttcCAGCTGAAAACAAGAACAGGtattttcaagttttacgtcggtg gctgcttcttgAAATTCACTATTTCCAGCTGGTTCTATTAGTAATAATAG TCTTACTTACCTACTCAGTCTTCACTTATTAATATACAGAGATAATAAGA TAAAAATAGGAGAATAAGATATTGATCTAAATATTTCAGGGGGGCACCCG ATTTCTAAACGaacatgtgccgccaaaaaatggctttcaaaatcggaccc ttttAGAGCAGATTTTGAGCAGTGAAAATGTATTTTACCGAACGATTCCG AAACTTACATTATAGTTTGATTTAatctcttattttgctgaagccatcGA AAATGAGCCTGTAATGTCGACACAAATCAATATACCCTTAAAGTGCATtc ctacccttaagggtggcacatgtCGTGgttcggaccatatgagtgtcCCC CCGGAAATATTTCCTTTAAGTGATCAAAGATAAAGTAAACCAAACATTAT CAATCAGATCAGGTATTTTGAGATGATAAGAATGAACAACCTTTTCCTGA CGCGCTCGAAAACACTAGATAGTCGTCTTTTCGTACTCACAAAAACCGGG GAAATAATTCGAAACTGCGATGTTGATAGTGGGGAAAAAGCCGTGAGATT ATAGTTTGGAATTAGCTTTGCAAAAAGCGAACGTGGTGAACGTCAGCTAT AGTATCATTGGTTACTATTTTAATAGTCTAGAAAACACTCACACTGCTCG AAAACTAAAAATTAAGTATGGATTAGAGCTATCCAGATTTAACCCAGATT TCgagattttaaacctttattcaCATTTAAATTCTATAAAatccatttta ttttcaatatctaaGGTCATCGTGCGATTTGATAGGAAGAGTTGCTTCAA CACACAACGTCACTACCAGCAAATTCTACAAAGATGGTTCACCATAGCAA TGAACATGATGGTAGATATTTATTATGGTCTCGATGTCCCATTGACTGGT CTACATCAAAACTACATCTCGAGATTTATTAAGGTATATAACAATATTCA ACGTAGCAATTCTTGTTTTAGCGGAAAACTTTTTCTCGCAACAAAAACAA tgcgcttattaatttttggaaaattttttttgaaagttcccttttttgtc ttaattctgctgtattagcctccttttcaaacattttccacccaggacat ttttattccacccccccccNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNAGATtctttccaacccccctgcttattccaacc cccccggctattaggtacccgagagtatttaaATACATCGTCAATTTTcg ttgattttcattttcatcttaacCTTTTTATGATTTAATCCCCTCTGAAA GAAAGGCGTACAGTATTCTATTTCAGACTATTTTCGTTGTCTACCTCCAT GTCTCATTGTTtccatattttcaaaacaaaatttgaatgataaattttcc aACTTGGAGCTATGCTTAGCACTGtctttttgcaaatttgagCCTCAATA TGCTTACAAaggttatgcttataaataagaGTGGAGTGGTTCTTAGCGGT TAGTGAAAACTTAAGTAATGCTGAAAGTAATGCTACCCAACAGACAACGC AGCATTCGAATATTTTTGATAGAAAGGAATTTTATTGACTGGCATGAGAG GGGTAAATTACTAAACAAATCGAACactaaatcaaaaataaatcacaaat gaaacattattttaaaaacaaaacataaatgAAAATCTTGAACACAATTa ttcgagtgatttacccctccgAATGACATAGACATTACGTCATTTCTTTC TGAATGACGATGCTCAATATTTGGTAATATTTTGCTCTTTCAGAATGTCC TTCTAAGTTAGCTTAGAAAAACCATTTCTTTGTTTTAGAATCCAAGCACT CCAATAAAAAACCCTCGTCTTGTTGGCTTTGCTGTTCTTGACTCCTCAAG AGACCCACGTTTCAGTTCCAGTCTACACTTAGCGGCTTGGGATAACATAC TAATGATAACGCCCCTAACAACACAAATGACACCCATCTCAACACCCATT GGTCCACCCTCTCCGCCGGAAACACCTTCTCCTCCGGAAACACCCTCTCC TCCGAAAACACCCTCACCTACCGAGACACCTTCCCCACCGGAAACACCTC CGCCTCCTCCTCAAACCCAAACACCCCCTACTCCAGAAACCATGCCACCT CCAAAACTACCGATTGAGGTCATCTCACAAACCGACCTCTCTGTTCCTGT CTTATCACAACCAGAACCTTCAACTACCTCCCCTCCAGATGCAAGCCCAG TTGTTGATACAGAAGAAGGAGGGGCCCCCTTCACAGGAAAGATCGCACAG CCGTACGAGGCAATGAAAGATCTTGTAGAAGGAGATCAGACAGAGAATCA AAGATACGAAAGAAACAAAGGAGTTGCCAAAGGAGGAGAGAGTAGCATCC GGTCACCACCCACTGAAACACAACAAAATGAAACACAGCAAAATGAAATG CAGCAAAATGAAATGCAACAAAATACAGAAGAACCACAAGAAGGAGGAGA GCCAGAAGAAGGAGAagtagaaaatgaaaatggagGACAACAGCAAAATT CACAGCAAAACGCAGGAGACCCACAAAAAGATGGAGAACCACAAGAAGGA GAAAACCCACAAAACGGAGACCTAAAAAGTGACGAGGAAGCGAAACGTCG AAGAATCAAAagtagaaaaaacaaaagaaaaggagTGAAAAAGGCCGTCA AAGTAGGAACGAAAAGCATCAGGTCATCATTTACTGGAGACCAAA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00058818TCONS_00058818Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00058818-proteinTCONS_00058818-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_314supercontigscaffold_314:140023..145917 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.49 0.27 0.2 0.09 1 0.85 1.4 1.97 0.33 0.67 0.49 0.26 0.18 0.26 0.27 0.51 72.13 62.27 0.89 0.78 47.18 52.53 0.42 0.45 0.06 0.11 0.13 0.37 0.58 0.37