XLOC_036413 (gene) - C. hemisphaerica

Overview
NameXLOC_036413
Unique NameXLOC_036413
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_298:115708..124867-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_036413 ID=XLOC_036413|Name=XLOC_036413|organism=Clytia hemisphaerica|type=gene|length=9160bp|location=Sequence derived from alignment at scaffold_298:115708..124867- (Clytia hemisphaerica)
TTTGTCGACTGGTATCTTATACTCGTATACATAGACCTGCACAGGCTAAA CATAAATGAAAATTACTGCAATCGAAGCAATTTCCTGACTGAGTTAGCAC AGTAAGTCACTGAAAATGATATGTTCTATCAAGCAAACCTTTATGCCAAA GAATGAAATTAAGTACTGTAAAATTAATTTACATTGACTTGAAAATATTA TGATGTAACTGTAAACTATTTTGATTTTTTTTAAAGAAGAGAACAATGAA ATAACTATAATGAATTACCGACAAACCAAGAAATGGCGGTAGTGACTTCA AGAGATGTGGATGTCACTCTCACTTCAACAATTGCAAGTCTCTTCCTTTT GATTGTCCTTCTCTTCACTTGTTTGGGTAAAAAGAAGCAAAATGTCGGGT GAGTCAGTTTTGTTTACAATATCATCTCTATCTAGTCTCAAGGTACAAAT TTATTTTTTATCAAACAGACAATGCGCACAGAGTGTACTACAAAGCGATA AACGGGAGATACACTCTGGTACAGAGTAGCTACAAGTTGGCTTGTATAGG CTTTCTAGAGGTTCCATAGTCCAAAGGTTTGTGGGTACACTATTCTATTG TTTGTTTGCTTATGTTGAGATGTGATCTTTCTGCTCAGCCTTCCCAATTC TTCAGGAGAAAGATATTATTTTCTTTTGCGTTCTTTTCATGGTCAATCTT GATTTCTACATTATCTACCTTTATGATTATATTTCATTATTTTTGCGAGT TTTTTTTTTCAACAATAATTAGCAAAATTTAATCCTCACAAAAAATTTTA AAATCTTTGGATTCATAAAATTTGAGTGATATAATCCATGTGAAAGTTAA GTTTTTTTTTCATACAAAACTTCCCTTTTGTTCTATTTGTTATAAACCAA AACCTGACTTTCTCTAAGCGAAAATTTAATTTTGTGTGTTAAATAATTTT TGATAAAACTTGTTTCATGAAAATATCTGCTTGGGAATGTTTAATCAACT TATTAAGGTAGTATTCATTGAGCAGGATGAGCCACAGATATCTGTAAAGC CCGAAGGGCTAAATAGGCAACTTTAAGCTTTCTTCAGCAAAAAAAAAGTG AATATCGGAAAAATATTGTTGCTATTGTTTTCCAAAACCCGCGAAGCTTC TGATTGGTCAATCGCTGAAATTCTATTGTANNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN TTGACCAAGGCCGCTTATCTAGCCCTTCGGGCTATACTATATCATTGAGC AGGATGAGCTATTCCATTTTGTTTATAACAAAGCAGCATTGGCCTATTAT ATATTGACGCATTGGTGTTGGGTGGCTGTTTTAAATCTCTGTGACATATC GTCGTTCACATGACTAAAGGTTAAATCTCAAAAAAGTAATTTAAAAAACT CAAAGTTTTACTGTGGTGGTCATCTTTGAGATTGACATTGCCCTTTTTTC ATGTAGAGGAATATTCAATGTTTTCATATGACAAAAAGGCCAATCTCAAA GGCAGAGCAGAATTGCAAGATTTCCAATTTTCCAAGACACTGATTTTGAG ATTGAACATTTAGTCATATGGACGACGAATAATGGAGACAATTTTGTTCA TCTTGTTGCTACAACATTTAAACATAAGCTCTCCATCGTAGAGGGCAAGA TGTTAGTCTTATCATATCATAATATCATATCAACTTTTCTTATCCATGCT TGAGATAACATGCTCTTGTAATAAAGTCGCATGGTAGCGAGTTATGATAC TATTCATCTTACAATTATTGAACTTCATCGTTTCTGCTTTTCAGGAAACC CAGGGCACAAAATGGCTCGAAACAAACCCTGGAATCGACTGAAGTTGTTA TAAACAATGAGGTATGACATATCATAACGCCCTACGCCCTTTTATACGTT TTAGTTTGACAAAAGCAATGATGTTATCATTTGATTTAACATGTTTTTAA CCGCTAAGCTTAGGAAGCTTCCTTTAAAGGAAAAATTAATAACTTGTTTT TAAGAAGAAAGTTAATTAAGTCGTTAGGTTAATTCAGGCCATTTGTCATT CATGAAAGTTTTGAAGCTCTACTCAGTTTTTCCATGCAACAACATGTTGT TTTTATAATTGGTATCCTTACAATACTATCCCTGCTCTATGCAAAAAAGA ACTGTTTGCGTTTTAAAGAATAAGGCTTATGATTTTTTGGGGGATGATAT GACTTTTCGCTTCCTCCTTCTGCAAACCATTTTTAATTTCATCAGGATGT GGTACCGGGTGTCCTAGAAAAAAGTCCCCCTCTTTGAAGTGAATTTTCTC GAGCTCTATGAACTTTGAAAGCATCAATCCTTTTGCATTGGAAAAAGGAA GGATAAACTTAAATTTTGAGGGGTCATTTGTTAAATTGTCATTTTTCGCC TTTTTTCGACTTTTTTGAAAAGTATTGTTTTAGAATTTAGACGATAACTT TTGATCTAATTGACCAAATTTGACAAATGACCCCTCAAAATTTAAGTTTA TCCTTCCTTTTTCCAATGCAAAAGAATTGATTCTTTAAAGATTCATAGAA CTCGAGAAAATTCACTTCAAAGAGGGGGACTTTTTTCTGGGACAACCGGT AGTATTCGAGCATTTGTTTTGAATTATTTTTATCAATTATCTTTATCATT GATTTCGTCGTATATTTTTTCTTGGAATTGTTCTCGCTAGTTTGTGGGTT CAGTTGTCAAACATTTTCTTTTGGAAATGTTCATTTCGATCTTCTCCCAA CAGACCTGTAATGGATTTTTTTCACATTTCTTCAGGACGTGAAAGTTGAG ATCCAAGAAGACACGGCCACTTCACAATATCCTTCCGCTCCCACAGAAAA TGCTACAACCGAAGAAATCCACCATTATGATCCCACAAAAAGTCAATCGC AAAATTCCATAGTTGATCCTTATGAATCAATCAAAGAAACAGACGGCAAG AAGGATCAGAAAGTTGCCAAACTGGTCACCAATGACGAGAAGAATGCCAG TGGAAGTGGAAACAGTGAGACCAGTGATAACAGTATTTACACCAAGGTTA AACAAGTACCTAAGAAAGAAGAGATAGCATACGCCGTGGTCGATATAAAG GAATCGCAAGAAAAATATGAGGTTGTCAATGGTGGAATCGTGCGGAGGCA GACTAATGATGATTCCAAAGAGTCGTGCGATCTCCCACCGGATGATTCCA TTTACGAAAAAACTACTTCGGCGGATGATGACCAAGCGGACGATAAAGTT GACGAACCGCAAGAGAATTCGGCTGGTTCTTCTTTATACGCGTCTGTTCA ACCCACGGAAAATAAGGAACGAAAAGATGAGAATTCGACCATTGACGCAT ACGCAGTGGTGGTGAAAGCGGAACCGGCCGCTCAACCCGTCATTGCCCTC GAAGAACAAGAAGATTCAGGCGCGTCCGGATTTTACGCCAAAGTTGATAA TACGTCATCAACGTCCATTCCAGTTGATCCCACGCCCCCGCCTCCACCGC CACCCCACCCTGCTAATATGAACAGAAGCAAAGAAAGTGATGATGTATCA AACTATGAACCCTTCGTACCTTCATCCAATACGAACATCGATCACGATCT TGAGCGCAGTAACACGTACGATTCCATCAAAGAAGTCAAGTTAGGCCACA AAATGAAGGCTGAGAAAGATGCCATTGATTCTTCTTCGAAGAAACATAAA CACGATTCGAAACATAAACAAAAACAATTAAAAAAGGAGCATGCGCATGC GCAGCAAGATTCCAAATCTCCAAAATCGAATCGTTTCTCTCGAGTGAATC CATTCAAGTTGAGCAAGAAATCGAAACGTAAACAATCTTTCGAGAATATC GAGAAATCGATTGAAGGAATCGATGAAACGAAAGAATTATCAACCAAAGA TAAAATTGCTTCCCTTCCTATCAATACGCATAAGAGTCCGAAAGAACTTC GACCAGGGACGGGCGAGCTATCACAAAAAAGACATTCCATCCCTCATATC CCTCCACCGCTACCTTCTGTTGATAAATTGAAACATTTGACGGAACATAA ATCAAGAAGGGGCTCTTCCTTTGATGCTTGCAGTTCTCCAGGTAAATATT TTTTGACTTTATTTTACCCAGGCCAGGTTGTAGCTTGCGCTAACTATGCA GTTTAATTCTGATGATCCTTATGCTAAAAGGTATAGGAATTAAGTTCGAA TTTGCCGAACTGTAATATCAAATATCTTATTTCAACTTAAATTAAAACTT ATTTTATTTCTCAATTTAAAGGATTTTAGGTATGATTCGAAAACGAAAAT TATCCATTGTTTTACTCCATATTTAAAAAAAACTTCAGTGAAATATTCAA TACATTTAAAAATCAGTGAACAGTTTTCTTCCGAAAAATTACATTTTAAT ATAAATTTTAGTCATTATTTACTAATTTGAAGCATAAGTAGCCATTTTTA CATATTTTTGGCGTTATTAACGGCCCTAATTGGCCTAAGCCCAAAATTAG GCTGTGGCGTAATAAGGGCCGGCGTAAAAAGGGCCGATAAGGTATCAGCT TTTTTTATGGATGTTGATAGCCCCAAATAATATATTTTCGGATGCTATCT CAGCAACATAAATAAAACCAGGAATACAAGGGGACAAGGTTGAGGAGATC TGACAGATAATGAATTGTGACGCTGCTCGTCCTTGTAATAAGTGACCTAA TGACCTAATTCAGCCATTCTAATTCACGTCGGCATTCGGCTATTGCCGAC GCAAATGCCGACGTAAAATTGGCTTTTGCCGAGGTAAAAGTGCTCACTGT ACTATAGAACCCAGAATTTTTTGCCGACGCAAATAAATCTGAATTAGAAA GGCTGTAATTATATCTTGGTTGATATGGGTTTATAGGAGGTCTGTTCTTT CTCTTCTTAAGCTCTGATTTAGACGGACCACTTTTCATCCTGCCTATTAT TCTTATTGTGAATTGAAGTGCGCAGAAAACTGGCTGTCTAAAGCAAATGC ATCGCCCCTGTTTGACATCAATGTAATGATTTCTTTCAATCTACCTCCAA GCAAAGATTTGAACTGTCAACTTTCTGCACTTTTTGTCTACTCTAATGAC AATTTAAAAAGGGAAGGTCAGAATGTCGGCCTTCTAAACTAAATCTAATT TTCTTGGAGTGTTCAAATGAATGGATAAGTTAAAAAAAAATCCAAAACCC CCTCCCTTACATTCTTTGTTCTGTTTTCAGATTCGTCACCGAGGAGTAGT CCAAGAACGCCTCTGGAAAATTCTCTCTCCTCCACAATGATGTATTCGAT GTCTTCACGATCTCATGTAATCTCACACGAAATGAGCAGTCGCGACACAA GTCGAACGTTTTCGGAGAGCGAGCATTTCATCCCTCGTCGGAGTGTGGAG GTCAGTTATGAAGAAGATGAAAATTACTCTACCGTTGATAACACATTGAA AAGTGAATTGTTGAAACAGGAAGATGTTGAAGAGCAATATTCAACTGTTG ATGACGGTTTGAAACATGATCTTCTGTTGAATGTGGAAGTGGAGGAAAAA TATTCAACGGTTGGGGAGCCCAAGAAAAGTATCGAGGTCGAAGAAGAAGA TAAGTATTCAACCATTGATAATACGATCAAAAGTGATATTTCACAGAACG GTAATAGTGTTGATGATAAATATACAAAAGTAGATGGTGATTTAAAGAAG TGTATTTTACCGAACGAACCCGTTCCGCAAAATGATCAACTCAAAGAAGA GGTGGAGGAATTTCCGGATTATGCGGTCGTTGATTTGGAGTTGAAACATC AGAAGCGGGCTGAACGAGAAGCTCTTCTACAAAACAATCCGAAAGTTGAA GGTGAGATTGTCTACTTTATCAGTCAGAGAAAGGTCCCATTCCGAAGAGT TAAAAAATCAGACTTCTGCATTAACACGCATGCGTAATTTGTCGTTCTTT TAGACCACATGTAGTTAATTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNATTGTATACTCTTCGGAATAGGACCT TTCTTCCCCTCTTATGATTGGAGGGAAATTCAGTGTTGCAACTTTTCCGT CTACTCTGTGGACTAAAATCCGTCCAGTTGAGATACAAATAAATTTTTTT GTTTAAATAACCATCCTGATCGTTGCAACACTGGAAGTCTTTATTTTTTT GCTACCCGGAAAGCAATGTACGATGTTTTTTATTTACCATGCTTAGGAGA ATTTACACATATTTACGAGCACTGCCCCTTTGGACAGTTTCAACGTCGTT AAAAACCCGGTTCCTTTCATTCAGGTGATACCGAGTTTATGTATTCGAGA TAAATCGAGGGGGACGGTATAAAGCAAAGTAGACATGTCTCCAAAATCAC CGTCCACTTTGCTCGACGACGGTAAAAACATTAAAATACCGTCGTCTGTT TAGGTGAGCAAAGGCTATATAGAGCCGTACATCAACCATGGACTATGTTT TGTATCGATTTCACTTACCGTCGCCCTCGATATCCTCCGATACATAAACT CGGTAATAGGTAGGTGGCCGAAATGACTCGTGCTGGTAAAAAATTTCTCT CAGATCCACTATATTCTTTCTTTTTGTTTAGTGGCAGAAGAGCGACCGTC CATTCAACCCTTAGTATGTTCCAAGAAAGAAGATGTTCAACTTTTGTCGC GAAAAGAACGAAATCGATTCTCTAACAGTTCAGATTATATGGTAGGTCTC TTCATTTTTCAATTCATGATATTCATGACGTAATGTTTTCTACGGTAGTA CCCCGGTTTTAGCCAGTAGTGGCAAATTTAAACTATAGACAAAAGTTGTA TAAAATTTGCCACTGCTGGCAAAAACCAGGGCTCTTCCGTTGAAAACATT ACGTCATGAATATCATGAATTCAATTACACGCTTTTTTTTATAAGAATAA CTTCTATAAGAATATCAGGGTGAGATTTCAGAGTTAGAACAATAGGCCTA TTGGTTAGAACAATAGAAAAATAAGAATAATGCTCACCCTCAGCCAAAGT ACACTATTCATATAAAAAAGCGTGTATTTTTTTTGCTCCTACTTTTTAAA ATATGAAAATTCGCCCAATTTTATGCTCAAACCAACCTCTACCCTTTCTG ACCTTAGTATTGATCAACATTTGAATTGCGGGTATTTGTGACCATTTTCT AAATCAAAAGAAAGTTGGGTATAGTACAACCTTCTTCAAGCAGTTTTTCT CATGTACTTTTCTATCGTCAATTTCAATTTTGGCCTTGATCCTGAAGTGT GAAGAAGGTGGAAATTTACCAAAAATTGAGCTTCATTAAAGGACAAATCA TTTAACCAGTCTCCTAAGATTTACTTACATAGCATTTTTTGATAAAAAAA ACAACTTTCGACGCCGCGCGAGCACAAATTGGGCTGTCCCATTAAAAAGC CATACATGGGGGGGGGGGGGGGGGCCCCTTTTAAAAAAAAAAAAACCTTT CCAGTCCCGGCGAGCCAAAATGGGCGTGTCCCAAAAAAAAACCATACAGG GGGGGGGGGTAGACGCACCTTTTCAAGTCAAAAAAAATATTGAAAATGTG TGGATACACCTTGGAAAATAGCGAAATTTCCAAAAATACCCTTAGAAAAG AACTTTTCATACCTTACAGTGAGGGTGGATGAACTAAAATCAGTCTTTTA TCCCCTGGAAATTTTAGAATAGCTTTTGCCTTGGAAAAATGAAAAAACAC CTCCTGGAAATTTTTTTCGGATTACCCTCTGTACATGTCCGTTCACCCCC ATGTATGGATATAAAATGGGATGGCCCATTGTGAGAAATTCTTTAGTTCT ATCTAGACTTGCCTCATTTCTATGTAGATGAAAAAAGAAGATTATCTCTA ATTTCTTTCTCTCTTCTTCTCTCTGCTTTCAGGAGATTTGAGTGAAGAAT TCATCATACTTTGGCAACATTTTCGTTTGATTTGAAATTGTGACAACTCT GGGATTTTAGCTTGTTATAATAATTTTTATTTTTTTAATGCATCTACACA TGGGTCATTCATAGTTTTAAATTTTTAATTTACTTTCTTTGCGAGTTGCT AGATGATTGTGTGGGACAGAGGTCTTTGTTTTCGTTCACCCAGATGGTTT GTCGAAGCTCAGAAAGTGATAGGGTTTATTTTGATTTAATCATCTATTCG GATCTATTTAGTGTGATTTCAATTCTGTAGTTAACAAATATTTCTTTTGA TTAAGAATTCTTGACTTTGATTCCATTCGTAAGCCACACTACAAAACCAC AGGTAATATAGACCTGCATAATATACTACCAACTGCTTTTTGGTTCAGTT TTTTTTACTTCGATGAATTCTACAGTATCCATTGTTGTCAGCTAAAAATG TCTATAGCCAATGTACTTATTAAAAGTTTTATTTTTACATTAAGTGTTTC CGTTTCATAACAGACACATATTTCATATCAGGACAGTGTCTTCCTATTGT TATATTATGCTGATATAAGCAAAAAATATTTTTCTTTTCCTCTTTCTGAC CAATCTTGCT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00057768TCONS_00057768Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00057768-proteinTCONS_00057768-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_298supercontigscaffold_298:115708..124867 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
14.14 12.65 19.32 21.1 28.02 21.33 26.3 28.77 20.87 24.05 18.9 14.84 14.24 12.86 13.04 13.49 15.78 13.03 11.12 17.83 9.57 9.9 12.66 14.35 15.13 16.67 14.69 13.38 16.6 14.03