XLOC_035749 (gene) - C. hemisphaerica

Overview
NameXLOC_035749
Unique NameXLOC_035749
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_282:343658..354118+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_035749 ID=XLOC_035749|Name=XLOC_035749|organism=Clytia hemisphaerica|type=gene|length=10461bp|location=Sequence derived from alignment at scaffold_282:343658..354118+ (Clytia hemisphaerica)
GCGCTCGCTTTAACAAgttattattccaagaagatgCTTTCAAATAAAGT GATAACAAACTGAATGAAGGACTTCAACTGTGTCTACAAGATGttcaaaa aggatttatgtaaaaactaaaagtaagtgaaaaaagtgaaaaataagttt gacGTTCGTGCATTGGGGACCCCCCTCTACAgaacttctttttttaattt taacagTTCACACGACAGTTTTTTGATTgcacaaaataaaacaattgatA TCGCAGTGTTCGCGGTGTGAGAGAGTGTGGTCCTTCCCGGTACATTGGAA ATAGGCTTAGAATGAATTGAAATGAATAACAGTATAGACCTAATGCAAAA ttattacgggaaacgcatatttgttTAGACTTTgtaccatggcgttctaa aatTACAGGCCTAGCAAGCGTGCATTGACGTCAATTCAATGGGggctgaa aaatcaaaaatttacaaaaacgaCGTCGGATTTTTGTCAGTGAAAGTGGT AGTGAATCAAGTGTTTCATCAGTTTTAGCATCCATTTGATACGAACACCT ATCACAAGAGTGGCCTGGATCGACTCGGAAATCAGATGGATTGACATTGA GCTTCAGGAGAAGGCGGGATTTCTTTATGTCTAGCTTTTCCAGTACCTGT AATGCAACCTTGGTATTGTTGAATATATTTccacaaaaattataaaatta gaaaaaccaaaaattttatttcacagTTTTCATTGAGTCTCACTtgtttt cctttgttcttttgtttcatTCAGTCCCTTGTGACACATCAGTTTCTCAA TTCCCATGTGGAGtgtcttttgttttaaagttcatttttgtCAGCAATGT GTCACTCTAGGATAATtacttttaattatttattcatttaattGCTTTTT TCACTTAGTTAATTTAATGACATAATATGGATAGGGACTTATNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNATCTGACTTGACAGTCATAGAGTCAAGAT GTCAAGGAAAtcagattttcacaaattttaataataattcattttgattt tcacttGTGCACTGGGTACTCACAGTATTTATTCACTGGCTACCTGGTAG GTTTTTGCTTTTGCATTCttgtttctttgcttttttcagtgtggccattt tgtttttctttcatgtgtcaaccattttgtttttctgtgCCTTAGGTTTA AGACTTTGTATATTTTCAGTACATTGAAACTTATTCACTCATATAAACTT ATACTTTTTCAATTCATATTTACACATCTAGACTTATACTTTTATAGACA TTTTGGacttagaaaatctttcaaatattttggacttttttattttgaaa cttatttGACCAATTGTAATTTACCTTTTTAGTTTGAACAATATCAACGT TCCGAACACTGTCAGTCTCAAATCCCTTTGCACTACAGTACCTGCTGCAC GGTTATGAAATACGTACCACCTGAGCCTTGGCGTAACTTTCCAAATTCCT TTTCCAAGGGATCAGTAGACTGTTGGCCGAGTAAGACATAACGATGCGTT GCTAAGAGAAGGTGGTCTGCAAGATCAGATAAACCATTCGACGTGTGATG AAGGGCCGTAGCAGTATCCTTTGTCAATGTCTTAATACGCCTGCCACcag gttttttccaatttctttaaagaaagatgCATATTCTTTCAAATCAGACA GACAAGGATCGTTTCGCGACTCGATAACTGCCTCGCGGGGATCTCGATGG CGAATATCTTTGCCTTTGGTTCTGACGTTGAGGATTTTCCAAATGTCGAC AATCTTTTGGATGAATCGATGGGTACCTTCAGCATTTTTCATTTCTGGGT GAGTGCGGAGTGCTGAGCATGTCTCGTCACAAAACACACGCAGACAAGTA GCTACTTTTTGACGTTCTATGGGCTTCGGTCTTACTGCAACCTCTGTTAG GCGGGAAGATCCACGAACACCGGTCTCCTGATGATTCTTTTTCCAAATCA TAAAGCCGCTGCACATCCTTCCATTTTGCGGTGAATTCGGTCGTATCATC CTTGAAGTTGAGCTTGCCTGTTTTTCCGTCAACCAGTTGTTTCTAATACT CTTAATCAGATGAACGAAATCGAACAACAGGAATGTGTTGTCGACTGTCA TCCAAGGTTTTTCTGGCTTggtatcaaattttttgaaaaagctcTGGTTA ATTCGATTGCCATCGCATATCACGGAAATGACTTTCGAATCTGTGGATTT GATAATGTCTATGGTACTAGTAACTTGGTCGTACAGGAACTGTGAATCCA TACCTTTGAATGGCagcattttaaacaaaaatgatGGGCCGCCCATGACA CAATTTATCATGATTTTAAGCATAGAGGAAGCGAGAGATGAAGGGTCGTT AATAGCGCTGCCGAACACAGTTCCACCATGATAGAGAAGAGAGGCTTTCA CATATATTTCATTGACCAGCAAAACGCCTTGTCGTTGATGCGGGCTAAGG TTTTTGAAGACTTCTTGTACGAACGTTCTGTCGGATGTGTTGTTGACCTG ATAATGAAAAAATGGAGTAAAAGAAGATAGTGTTTTCACAAAGCCCTTCA AATACATTTactaattttcttttgaaaatgaagaaatgctTACTTTTGAC GTGATGTTTGTCAATGTCTTGATACTCGGAAGTTGAAAGTCCTTACGAAG TCTTTCATAGAGCGAACGGGACATGGCGAAGTAACCAAAGGCTCTCGTTA ACACACTTGCACTATACTTCTTCTTTCCAACTTTAGACGGTTTCATGCTG TCCGGGATGaactgttttgatttttgagtgaGAAAAAATACTTTCATTAC AAGCGATTGGTACAATCTTAATCTTTATCTTTACACACCCTATTGCTtcc ttcttataaaaaatacaacaGTGCATTTGTTGTAAACACATTCGACTTTA GAGcctaaaaataaagaataaataaagtaaaaaaaaaaaatctctaccTG CAATTCATGTTCTCCGGACTGCAAACTTTTTGTGAGATTCTCGAACGAAA TTTTGTCTTTCTCCAGGAAAGCAGACATCTCATCTTCTTGGTATGTTCTT TCTTCATAGCGACATTTAGAAGTTTTTCTTTGAGGAGGAGGTGGCGACGG TATCGAACTTGTTGGAATGCCATCAAATACGGACGGTGGATTCAACGGTC TTTCTTTGCCTCGCTCGTTTTTGGTGATGGTAAAACCTTTTGGCCAATGC TTTATGCATATATATGGGTTGGTCTTCAGATTTGAAATTGATTGCTCCGA GACATATGGGATAGCTTTGATCTATCTATTCCGTTCATCAGATCGGACCT TCTCTCCAGTGTTTATTTTAGCATTCTTTTGGCGCAATACATCGTTTTTT GCTTTGCTTTGGTCATAATTTGACCGACAGCCCTTCACAAAACACTTCTT ACCCATGTCTTTAAAACTTAAAGTGTGGGCGTTTGActatttttgacgtc aaaacgtAAATGATGCAATGCAATAGTGAAAAGATtaattgacgtcaatg caatgtcttcttttttgtaaaaatttttcaGCCCCCATTGAATTGACGTC AATGCACGCTTGCTAGGCCTGTAACTTTAGAACGCCATGCTTTGTACCCT ATACTGCACGCAAgcacagtgctgcaaataacggccggtgactggtaatt accggtcattttgtagtttctacCGGCCAATCTGAAGTTCAATctttcat tttgtccggttaaaatttaAAGACTATAGAGGCTTAGATAAATACTTAAT AACGTTTCTTAAAAGAGGAATAGCTTTTGAATTAATACATgtgtttagcc aatctaaaggtcatttcagactttttggacctaccccggtggggtggagg tcctataaattcacctctgtccgtccgtccgttcgttaccagcttttctc gagattgaatcataggaaNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNgaaattggatca ttaattttttctgatttttcgcatgaaagtagggtaccatcataggtaaa agatggctcaagcagatttttgcaaaaaaatttatttggcttaaaaaacg catgtttatctataagaatcactattaataagcatacatcaatgttctta gtcaaattactcaatttttttacgagatagatttttttttgctcacgagg gcttacttttgaaacatatgtgtgtttagacatgaaattttggttgcttg gcgtgtttttatagaaaaactggccaaattcaatatctttttataagcac attatcaattacttaggtattagcttttctcttggctctttcattcttta tgattttttccacaaagatgcataactttaaaccctcgaaagtgacggag cccaattatgaaaaaaaagaatgttttttggcaaatttgggccaaaaaac ggctaaaaaagggtttttttgaactttgtgaaatattggatcgttgtttt tatctgattttttgcatgaaagtaggtaaaagatgggtcaagcagatttt tgtaaaaaaacttttcagctcaaaaaacgcatctttatctataagaatca ctattaatgagcatacatcaattttcttagccaaattactcaatttttgg atgagatagatgtctttttatgctcacaaagtcttgaatatgaaagaata tttcaagagtatgaagttttggtttctaaacgttttttttataagaaaca aacgactgaTTTTAATAAATTGTCACTATTTGtattctgaatgattgttt aacgttcatactcacgtagatatcaattatatatgtgttaaatgcataac caggtaggtcaataaaagtatcacttgtctaATGCTCAAATTATTTTCGT GGCACTcaaaaaattaccggccaactgaaatttccttatttgcagcactg aagcacttaagctaaagtcctgcaaaagcgggacaaaaatcagtttgtta agtttgcaaaaaaatgccacatatagaatatttttcaaattcagtatgtg aatagagcttTTGCAAAAgctctaggaatgaaaataaagggataatgata attgaatactatccactgatgatccgcagcactatcgtaaagctagaatt gctttGCGTTTCTTCGCTTGAGaagatgattgacagattaaaatTTTTCA CCCGTGCAGGAGCTCGCAGGCATTCTGTGAgtgttctcggctcaatcctc ggacagtgctaaaaatggtagacttagctgtgacagatcattttgatgga agttgttggaatgtttacaagactcttgacagaaaatcctttgttttatt gtcaatNcatgctaaaaatggtagacttagctgtaatagatcatttcgat ggaatttgttggaatgtttacttataaggctcttgacagaaaatcgtttg ttttattgtcaacgatgacagtgccgttattaattttgttagatctgaca tattgatgtttgtaagcgcactttatagttttgattcccattgaagaatc atattctggttttcatgttataaGTTGCTGTTtgagagctttagagctag cctgaatAAGATAATTTTATAACCTAGGAAATCATAGCGCTAGATAAAAA TTAATCGTACAGTAGAGACtattaaaatataattaaacATATCCATCATA TACTCAAGTTTGTAATCAAAAGGAGTGGTCCAGCATTTGAAGCAAATCCT TTTAATAAATATCAGCAGGGTTTGAATTATAAATTTAAGGAGCTTTTTTT CACTGTTTGCGaagcattttttttattttgcaatgttgtttggaagaaaa tgcgAAAGTATCTTCAATGCATCTCTCGAGAAAAGCGAAGTAAGACTTGA AATAAGTGGTTGTAGAGACAAAGCAAAGTatagtgaagttttgaagtagt gagtagataaagcaatagataaacgaagcaaagtagcaagttgataaagc aatagataaacaaatgaagaaagtagcgagttgataaagcaatagataaa caaatgaagaaagtagcgagttgataaagcaatagataaacaaatgaaga aagtagcgagttgataaagcaatagataaacaaatgaagaaagtagcgag ttgataaagcaatagataaacaaatgaagaaagtagcgagttgataaagc aatagataaactaTTGAAGAAAGTTGCTAAGTAAGTGTAgtgagtagata aagcaatagataacgagtgaataaagttgcGAAGTAGCGAGTAGATAAAG TAATAGATAAACTATTGAAGAAAGTTGTGAGgtagcgagtagataaagca attaATAAACAAGTGAATAAAGTTGTAAAGTAgcaaaagataaacaaaat gtGGGCAGAATAATAGGTGTCGTCTTATAATTTTTAACTTCGCATTTTTG AGTTACGAAATCTTTTTTGGTtgctaaatctaaaattcagaaaatgcaaa atgTGAAGTGCGAAGCTATAATTCGAAGCCTTATCAATTTTCAGGATAGG TTATTCATGAATTTTGTCATAATGCCCCTTCTTCAGACTTTTCAACCTTA AAAAGTGAAAAGCCTGgagacttttaaaattttcccatCAAAGACTTGGA GTTTAGTGCAAAAAAGTGAGATTTTAAGCTCTATGCACTCTTCACAAAGG CCATAAATGTCAAGCTGATTAAAGTAGAAAATGTGATCAATGTTGATGAA TTGGTAGGTGACTTTAGAAAAGTGACGtttaccgggtgacccacgaaaaa gtataagagtttggagggtaactgtgtccgaaaaaaattgaattttaact aaattctttGTTCATGGTaaggaaaggcaaacttaaattttgatatatca ttttttaattttggaaaagtagttatcgagatatggaggtataaagtcaa aagtcattacaaaaaacagttaaaaaacgtcaaaaaagacagtattaaat taattaattaacaaataaaaagaGACCTCGAGTAAGAAgcatattttgat ttcttttaccgGAAGGATTCAGAAAAGAATAACAAAGGTTGACACttctt ttttaatcatatttATTCATTTGGAAAAGTACGACCCCTAGCATTAATAC AGCGACGAGCCCTAGAAATAACTCCATCGAAAGCGTCTCTGATCATTTGC TGATCTAAGTTGTTACAAGCTCTGATGATTGCTGCTTTCAACTGATTGAT GGTTTGGGGTTGCTGGTTGACAGGAACATTCCAAATGGTGTGTTTTAAAT AGCCCCatagaaaaaaatcacagaTCGTCAAATCTGGTGATCTTGGTGGC CAATCCCAGTCTCCATTTTTGCTCATGAGCTTTCCTGGGAACTGCCCACG GAGATATCTTAAAGATGCGTTGCTAGTATGAGTGGAGGCTCCATCCTGCT GCCACCACATCTGTTGACGATTAATGCCATTTCTTCTGAATTCTCGCTGA ATGACGTTGTACCTTATGATCCGCATATACTCCTGTGTATTCAGCTTACC GCAAACAAAATGTGGTCCAAAAATAGTGCCATTACGAGTCAAACCCAACC AAACCATCACTTGACCTGGTCCTTGAGTGAACTCAACGTAATGGTCTTCG GGATGCCCATTTCCATGTTGACTGTATTTAATGACGTTCTTGGTGTTGAC CTGTGAATTTAGACTAAAGATGGCTTCGTCTGAAAAAATGACATTGTCAA GGAAGCCAGGATTTGCAGCAATGGTGTTGATAAGTCTGTTGCAAAATGTT AAACGTTTTTGATAATCTGTTGCACGAAGTTTCTGTCTCTTAACCATTAC ATATGGATGAAATCTTACGGTTTTTGCGATTCGTAAAAATGTAGAACGGA TCAAACGAAGACCATTCCTCTTTGAGGATCTACGACCATTTGCAATTAGC GAGTTTCTAACAAGTTGAATGTTTGCTCGTGTAGTTACTGTATGTCTGGG ACCACTTCTTCCTTTATTTAGGTTCAAACAGGTGCCCTCTGTTAAAAGTT TATTGTAAGTTTTCATGATAGTTCGAACTGTTGGAGGTGGAATATTAGGC CAATGACGACGCCATCGCCTAAGAACCTCGGAAGCGTTATTTGTTCTGGC GTATTCCAGACAAATCCATACACGTTGATTTTTACTTAGCTGAGCCATCT CTGAAAGTTTTCTCTCAATGCTCTTACAAATTAACATCAAGCAAGACAtt tcgaaaattctttttgctACTTTTGGTACTTTTTATCTATTCCCAAAAAG ACGATTTGGGAATTGTCCAAAATTcgatatttcttatttttttcttaacg aaacttttaagacaaagaaatagcaaatgatcaaaagaaagatgtttgtt ctgatacaaatttgatactgtcttttttgacgttttttgactgttttttt atagtgacttttgactttatacttccatatctcgataactacttttccaa aattaaaaaaaatatgatacatcaaaatttaagtttgcctttcctcttta ccatcgaaaaagaatttagttaaaattcaatttttttcggacacagtaAC CAtccaaactcttatactttttcgtgggtcacccggtagtagACCTTTTT TATAACTTCATAAAAGTGGAGTAAAAAAGTCTCAGATTGAAGTTGATTCT AACCTGCTATATATTATAATTTATAAAGTATAGATTAGAAGAGTTTGACC CCAGGtcaattaaaaatttcattttctcagACATGAATTTTTCATTATTC TCTACAGGGTATATATACAGAAGTATCATGTCTTGAATTTACAAATAAGA ACACATTCTTTCTAACAAAAATTGATGAACTGACTTAATAGAGATAAGTG TATTGTAATATATTGGATTATGAATGGTCGATTGATAATATACTACCAAC AAAATGGAAAGCGATCCAACCAAACTGACGTCGTTCAAACCACTGACACC AGTTTCCTCATCCAAtcgattttctttctcaaaatgGATTGATGGCTTTA CAAAGAGACGAACAAGTCAAATACCAAATCTTCCTCCAACATCAGAACAG GCTACTGGCTCatcaagaaaagaaagaaagatttctGTGAATAATACAGA AGATAAGAAAGAGGATTTGGCACATGATAGGGTATGAACAATTCATgatc ttttttcaattctttaatGTATTACAATACATGAAATTCTAGTAGAGGCT TTATACATGAATAACTTTTGTCAAGGagcttgcaaaaacctctcttTTCA TTGACTGTCATTGTTTTTGCTACTTACAATAAAGCAAGAGTTGTTTATGA AGCCCTTTGAAAAACTTTAGgagcattttttaatttcgttttctaattat ttttgttacaaaatcagcagaatttcttttattttttttggtagAAAGTC TTATTTCATTAAATTGGTAAATCAGAAAATCTGCCATATAccatcttcgc tttctgatctAAAACATTTTGCTGTATTTTTTCCTCTATTAGAATCAtta aaaaggcaaaaagtagttgagctccaacTTCCTGACTAATActctcaaaa attttaattgattttGTAGCGTTTTCCAATCCTTACAAACAAAATTAGGA ATGAGAAAACGAGTGGAGTGAAAGTTTGAGTTGGTCGCATAGccgataca taccttattcacaaAATCTAGTGGATTGAGTTTGTTAATCGTCCAATGAC CAAACCTTAGTTTGAATCCTTTAGACAAAAAATCCAAGCGTTATGGTTGG TCAAAATTTGTAATACGCATGTTTAGTTGACCTTATTACTTTCTGCCCTT TCAATGCTAGTTCAACCCTAAGATGAGTCTCAAATTGCCATTTTTTAACA GCAAATCTTTCTGTTTTATGAATTTGCAGGAAGATTTCAACTCATGGTTA ACAAAGAGTATTTCAAGTCAATCAAAATTGTTTGGTGCCAAAGAGAAGAT TCCAGAAACTGATCTAACACCTGAACCAAGGAAAGAGAAATGGCGTTATA GAAATGTNCTA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00056742TCONS_00056742Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00056742-proteinTCONS_00056742-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_282supercontigscaffold_282:343658..354118 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
3.81 3.39 5.66 3.85 18.16 12.9 11.54 14.68 5.42 6.89 6.35 7.22 6.87 6.96 6.73 10.01 9.79 8.73 4.41 7.54 7.37 7.55 5.53 9.71 13.45 14.77 5.81 3.47 11.84 13.21