XLOC_035740 (gene) - C. hemisphaerica

Overview
NameXLOC_035740
Unique NameXLOC_035740
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_282:15029..20537+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_035740 ID=XLOC_035740|Name=XLOC_035740|organism=Clytia hemisphaerica|type=gene|length=5509bp|location=Sequence derived from alignment at scaffold_282:15029..20537+ (Clytia hemisphaerica)
ATAAGGataattttgttaaaatataCGAATGTTCCCTTATAGACAAACAA ACGCAGCGAAACATTATGTGTGATCAGTGTCAGCGAAACCAATtagtcaa aatggaaaaattacgAGCTTTTGAACCAGTTGATGAGGTAGGTCGCAAAT atctgaattttttcttttgttatgttttttttgtcacAACCAGAGTgctg aaattaaattttatgaTTTGTTAAGCCCCATAGATGGACTTTAAAAGGTC CAAAAAGCCGCCCTTAAGGTTGACACATACCCACATCCTCCATTTGACTA TCACATTTATAATCCAgctatcattgtttttagtATTTAATAAGAAgtaa aaaactctaattttgttTTCCATCTGTTCAGAGAACTTTTGAGTGGGAGG CGATGGAATATGAAGGCTACCTCGATGAACGGTATGGCTTGTGTGCGATT TGTCAACTGTCTTTCAAAGATGAGATCAACCAACAGAACACCCAGATTAG AGAAATGTACAGCGAAGAATTCGAAAGAAAGAAACCAAAGAGCGGCCTCA GAAAACTGAAAAGAAAGGTATCTCTCCTGACAACTTTCGTGGAACTTTCC AATTTTTCTGTGTGGTAATTTTGTGTTTCTTTCTCCAGGTGTTTCTAAGT GTCAAGGTATACAgcagctcgcgtctgtcaagtcACAATGTCTATTCTGC GCCGTGACTCCTACCCCTTATTGGAGCTTTACTAAATAATGCAGTTTCTG taaaaaggtttatttttaTACACTTTAGAAAAACGGATTTACGATCATAC GTAATTACCGAAAGCTGTTACCATTGCACTTGTTCTTGCTATCACTTCTA CCTTTGAATATCGATAAATGGAACTTCGAAATGGAAATGAAAGGTatgat ttgaaatttgtaaaaaccttactttaactttcttttccaCATTGGCATGC AACCGAGGAGTAGCCTGGAGCTCACAAGGCTTTATTATAGCCTGGGTTGC GCTGTTAAATCACCGGGTCAAttatttaaaagtaaaattcaGCCAGGAGT GGATTCTACCCTAACGGTATAGTTAAATTAAACTCAAACTTATATTCTTT CTACGACCTCGGTCCTGGATATTGAAACGGTAATTCTGAATCGCCGGGTT TTTTTAATGTGAAAATTAGGGGCATAAtattatttttcgtttttatagAA ATGCTACTATTGGTGACATCTGGCACGGCTCTGgttttcaatattatttt gtttttgaaacgaTCAAGGTTTCACTGGTAAGTGCTGATGTAAAGCATGA TGCagggaaataattttttgtcaatcgaaTATAGAATCATTGCTTTTAAG AATTCCCGTCTCCCTTGGAATAAGATAAAGAGTGcatttgaattttattc tttTAACTTAAACTTCATATTCTCTTTCTGTCCAGGTTACAAGCTGTATC TTTTGTGCTGTGGTCAAATCTTTTATTCAACACATACAAAAAGAGGTATG CTTTCAAGTCTTACTTTTTTTAATGCAATTTGACCCTTTCCCTTCTTTAA TTTTCTGAACGATATCcgataaattatttttcattgaaaaaaagaaaaaa tggttCAGGGGAAGTATCTTTTTCAATCTTTTAACAAAGTGAACTGAATT TTTCACATacatttagaccatgttcagacgttacggtttcgtatcgTTCC GGTATGGTTTTtgttacggatcgagagtgttcatattagtttcggaacgt ttcggagcaagacaATCTGTTTTACTTtgcaacgtcttcttttttgacgc tTCGAATTTTGACGCTCACACTAGTTTTggaaccgtttcgttttggAACG ATTGGAAactaagttattttgattccccttcTCCTTAGCTTTAAAATgta ttttgaccaaaacaatcgggcgattttacaaaatgccctctactatatcT ATATGGGTATTCAGAATGTCTTAGTACAAATAGTGGAGAAAACATCATCC acattgcccgatgatgggagaaaaatctctcaaaacttagccaaacgtaa atttcgtgatccaagccacgataaacttccaatatgaatatcactgggtc gataaacTCAAACCTATTTATTAGATTAATCAATTCAAGTATTACCTACC ATTTTCTTACACGGAATTTTCCTCCCGTTCGGTGCCGTGCGAGCACAAAT TTCGAGAaattctttagttttttctgctttgtcagcataaaggcGCACCT CTTTTCTATATCATAAAAGAATATCATTAAGTTTGCTGTTCCATTTAGGT CAGTCAAAACACCATTGACATTGAAAATGACAACAGGCGTCGAACTCGCA TCGTTTGTTTTACAATGCGTCAGATACATTTATCGAAAATGGAAAGAAAG AAAGTATATCAAAGGTcgaaaaaggtatttttacaTTCTATATCGCCtaa ataaaatttggaaaaaattattgCTTTAGATAAACTTAGGTCTTTTCAAA TTCAGACTTGGCcctgtttttttgttatttttttcctgaACTACagtcta attcgaacctcttaTATTCTAGTGGGGGGCCAAgaattttattcgaatta gagcaaaattcgaataacagagattATTTCATCCCCCAGCTCAGAGAGGA TTAATATTTTAGTTGGAAttttagaaagattcgaatagaaAAGGTtcgag agagttgactgtactAATAACATCATACGATGATTGAGCATATTCTCGGA TTTCTATTCCTTATTGAAGCATTTCAAATACTTGTCTCATCTTTTCAGTA AACTGGACCGTTTAACACCGAATAAACCACGTGGTTTCTTAGATGATTCA ACCATTACGTCATTCGAATCAGACTTAGGCTCCGAATACACAGCAGACGC AAAAAGCGTCGATTTATCACCAGAACGAGGCAGGGCTGTTATCACACCAC ATACTAACAATCGAGTCGTTGGGAATGTTGTTATGGAAACAAATATATTC GAGACAAGAAGTAGAGATCCATCACCCGAACGAAATCAACCAACAATGAC ATATGTTGGTGAATCGAGTAAAGCGAATAATGTGAGCTCATTTTTGTGGG aactttttctttccaaatgatAATTATATTGGTTCAAAATTCAAGATCTG CATCGATGAGATTGATTCCCATGAGTTAATTTAGAAATTCTTTTCCCAAA ACGTTTCctttaaaataatgaataatcaaaagttttcaccaaatttgTTT TTGCCGCCATAGGTTGACAAACGAAAGGACGCGCCTGACTTATTACAAGG ACATCTTAACGATATGTTTATCGGAAGAAAACGAGATAACACTCAAAGTA AGTATCATACAACTTCTCTGTTCATTTAGAGCGTTAGATTCCTCATTTCG GCAAACCATGAAGACAATATAGAGGTAATATAGAtgtagatggagagaaa acgtctcggtaatgacctaaatggtcgttgaaattttttataaatctatt caaagcggattttctttgatgtaccatcattggaagcaaaaaacatcaat ttataactttataagaacagaaagaggctggtccgttgattttgaaaaac ttaattttgcgagaaatcCTTGTTAAAATATGATTCGAAATAGTTTTAAC CGATGTAAGGATAATTGTAAGAATTGAaggtttcttatcttaaaatcttc acatccaagtgggcagcggttttcatactctgacaaaaggTTCACGTGTA AcatgtaattcttttttaaatccatCGATGGATTTATGAGCAGCTACCCC TAAAACTTTGtggtattgtgcttattatatgaagtttttctcgatttttc aCGACAaggatattatatttcaataaactcgttaaaaatgtaatgtcttt tcattcatcttaaatattcccgcGAGTATACGCAAAAGTAATCATTTTAT TCCCAAAGCAgcaaaacagctgtttgcttccgatgataagtCAGAATAGA ATAAAAGGCATTGACATCtatttttattaccttcatAGGCAAACCTTTAA TAGGCCGGTAGGAAACGATATTGTTTCCTATAAGAAGGTGATGATGAAAT AAAGATACAATATTTTAGGGATGACTGTCTTTCAATTACCAAACTCATtg gtttcaattttaattttgctttattttcaaattctccttcaaaacaaaga aatgtttttttttttcgttttctccGCCATAGCTTCAACGAGAGACGCCT CCGCCAACCACGTCGTTGCCGCCCTCAAATACAACAAAGTACGTCGTACT GAAAGTATGCCATCCTTGGCCAAACAACCATTGATTCGGCCAGCTACATT TTTATACAGTGGATCATCTCGAAGTGAAACCACGGAAATGGAACGAAATA ATAACGAGATAGTTTGCAAACGAGAACAACCGGTGACAAATGATTCGAAT ATAAACGAAGTAGTTTCGCAAAGGGAAACCCTTCGACCTGATCCCGACTT CTCGGTAAGACAACGATTAACCTCAAGAAGGGCTCTGAAAGGATTCCCAC AAGCTCATTTAGAACTTTCTAGACAAGATGACGCTATTTACTAttagaaa tggccaaaaacctcctgattttcaaaattttggtagtcTTTCcgaggttt tgagaatttcatgttcaatttttcatgttaTCCATGAACtcgatagatag atagatagatagatagatggaCATACaaagtctttttattttctatctcG CATTTTTGCCAAGATGTAgcagtagtttttgctgcctttttaggagattt tattgGTCAACCGACCGACGGACCCTCTTTTTTGAGTAGCTCGGCccata aaacaacaaattaaattggcctcgcctaaaGTGAACTTTGATCAcgaaaa aaaagcttttcagtGAGTTTTAAAGATCACAACATTCTAAGGAAAGGTCA AAATGTTACAGTAATGTTTCTTGACCCTTTTGTGTTGGTTTGCTGACCCC AACAGCATTTATCAGAAAGTATTTGGCTTTGGGAAAAGCTTAAGGGAAAT CCTctattttattcaaagtaataccaGTCTGAGCTGATGAAACATAAGAC TTTATGCAAataattaccttatcggccctttttacgccggccatTACGCC ACGAGATAAAAAATAACggcaataagggccggtgtaaaaagggccgataa ggtaaataACTGGTAACACGAGAAAATCCTTTCCTTTCTATGAATGGAAT GTTGAGAAttgatttcattattttttcaggTTTCCCAACAGAGAGAGACG ATATCTAACCTGCAAACAGACTCTCTTGGATCACGATTTGTAGAAACCGA TCAGAAAACagcaaaaacttttctatgGAAATTTGTTTTCGTAATGATTT TCTTGTTGAGTGTGGTGGTTAATGGtgtatttttatacttttttatgcgt gaaaaatgaaaatttgttgaattttttgtaaatggaagataacttttaaa atattgacA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00056723TCONS_00056723Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00056723-proteinTCONS_00056723-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_282supercontigscaffold_282:15029..20537 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
42.97 38.12 22.18 18.44 18.56 14.55 11.14 12.49 7.47 7.95 9.86 8.63 12.35 17.14 18.12 20.08 10.02 15.23 12.44 7.23 15.52 15.23 39.52 33.81 14.1 12.74 5.42 11.61 22.6 27.32