XLOC_034946 (gene) - C. hemisphaerica

Overview
NameXLOC_034946
Unique NameXLOC_034946
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_253:1145558..1148903-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_034946 ID=XLOC_034946|Name=XLOC_034946|organism=Clytia hemisphaerica|type=gene|length=3346bp|location=Sequence derived from alignment at scaffold_253:1145558..1148903- (Clytia hemisphaerica)
GGAAAACTCGAAAAAAGACATGGGCATAGTGAAGGTTTGGTACTTTGCTG
TTTTGACTTTGTTGTCAACGCAATTGTTGAATTGGTAAGCTTTCTATAAG
ACTGTTGATATTCCCTAGTTCACCCTTCAGCATAAAAAAGTTACGAAAGT
TAGGTACGTTGAACTTTAAGTCGAAATCAACTTTGCAAGCATGATGAGGG
AAATTTCAAAAATGTTATAACAATTTTCCAGAAAATCCCGTTAGCAAAAT
TTCGTTTTCATTTTCAGTTTGCCACACAGAAGATCACGTCGAATGGTGAA
TGGGGAAGATGCGAAACTAGTGGACTGGTATTTCACAGTGTTGTTGGTGA
AAGAGGTAGACGACCATCCATTGTACTGTGGCGGTGTGCTCATAAAAAAT
GATTGGATACTGACTGCTGCTCACTGTGTGAGTGGAGTTGTTGATCGTCC
TCAACTTCTTTCGGTTAGAATAGGTGAGTGCTGTGCTTACTATCAACCGA
TAACTGTCAGTACATACAATACAGCTTTTTAGTCTAAATCTGTGATATGA
TCTTTTTAGAAGGGTTGTTAATTCGGTTTGTGTAGAAGACTTGCTGAAAT
AAACCCCCAGCTCATATGACCCTTCATAACAACTTATTTTTAATACAGGC
TCGACCAAGCGATCTTTACTGAAAGAATACACAAAATTTCAATATGAAGT
GTCCAAAATCTACATCCATTCTGCCTACAATGATGAACAGATACCATCAG
ATGATATTGCCCTGATCAAGCTGAAATACCCTATCGTCAGCAATCGATAC
AATTTTGTACGACCCATCGAGATTGCTTTGTGGCGATTCAAAGGTTCCGA
GAGACACTCCATGCATTGCCAAGCTGCAGGTTTGTCTGATGTTTTTCGTG
GGAATATTTACACCCCTGTTCTGTCGTTTAAGGATGATACAATATTGAGA
AATTTGTATATTTGCTGCTCCAGATTGTTATTATAATTTGTCTATTTGTC
TATTTGTCTATTCTTAGACAGATCAAAAAGCCTTAATAAGTGATTCGGGG
CTAGCTATTCAATAGACAATTACCAAATTTCATTCTAGTTGATGTAAATT
ATAAATTCTCATAAAAAAACAGTTTGTGATAAGTAATTTTTCTAAGAGGA
ATGAGAGTCATTATTGAGATTGTTTTGGATGTGAAACATTCCGTATGGTA
GGTTTACACTACAAAGCTTTTGCCTTAATAATGTGCCAAGGGAATGATGA
TGATGATAGGACGAAGAAGTCTCATTTAGACATGATTGTTTTAAAACAAA
AATTTCACTTTTTTTGTAATCAATTTACGCTGTTTTAAATAAGCATTGTG
TTAGTCATTTTAAGGCTCAGTAAAGAAACTTGTATGTAGATAACGTCATA
CGTCATTGATCGCCTTTTTTGCTTAACCACTTTTTACACTATGCCGTGAA
GTTTAGGAATCAGGCTAAAACGCCCCGGATTCAGTCTAAAAACTCACGTA
ATAGATTCTGTATGTCATAGATAGCTTCTTGCTTAACCTCGCTATTTTGT
ATTTTCGCCATCATAGGTTGGGGAAAAACCAAACCTTTCTCAAGTATTCA
AGAAATGAATGACACAAAACATGAACCATCATTATTTCTTCAAAAAATCG
ACGTTCCATTACTGAGCAGGAAGCATTGTATTTCTGAATTCGATAAAGAA
AATGGCACAACGATGTTGAGCAACAAGAATTTGTTTTGGAACAAAATGAT
GTGTGGTGGAAGCTCGAACCCGAATATAGGTAACAATTTGTCTTACATAG
ACATCCCTGACTCACTTGTCATATTCTCATAACAGATTACTAGATCTGCG
TATACCATGCTCTAAAATACCCCTGTCTCACAGCCCCGGTGGAACTTTTT
GCCTCATTAGGCCTAGGGGATAATAACTCCTATCGAAATGCCAATGGGGG
TACAAATTCTATTGTTCCAAGGTTAAAAAATCCATCCCGGTTTTGGAGTG
CAATTTTTAAACTTTGAATTTTTAATGGGGATGAAATAGTGGGGCTGAAA
TTTCTGCCAAATTTTCCAGTAGGGCTGGGGTCCCAGCGGGTCTGTGACAC
AGGGGTGTTCTAAAGGGATAAGCTTGTAAAATCAAGAGCATTTAATCATG
GAGGTATGAGAAAAACATGAGATATAATACTATAACCACCCTCGCCCTAC
AATTAAAACGTTGCGAGAAATGAAGTTTTTCTTTATACTTTAATGATTTA
ACTCTTATTTAACCCTTATTGGACAAGTATATACAGTAACCTCTTTTTTC
TAGTCAACACTACTTTGTTTTTAATGGAAATAAAAAGCAGTTTAGTTAGT
TTCATGCTAATCCATTGTGTTTTCATATGGCTTTCTCCTGAATGAAAGCT
TCGTTCCTAACTAAAAATATTACCTCTTGTTTTAGGAACGCCCTGCCTCT
ATGACTCTGGATCTCCTTTAGTATGCAAAGATATCTACGGAAATCGTCAA
CTATACGGAATAGCTATTGCAATACATGGACCGGAAATTAACGAGCGACC
TTGCACACCCGGCAAACAAATCTCAGTTTTCCTTAGAGTACCACATTACG
CTAAGTGGATTATTAAAACAATAAAAAATGCTCAGGAAATAGATGAGAAA
TAGTATGAAAGACTTGCTAATCCGTTTCTCAATAGAGGACGTTCTATGAA
CAGGGTCCGATTGATTTTGATGTTTTGTTGGTTATGATTTGAAATCAATG
AAAAACTATTTTGAAATTTGTCGCACTACCCACTCACAAAGCAAAATCAG
AGTGAATTCGTAGCTCGATTTCAGACAAGTTGTATGAACTAAACGAACGA
ATACATTGGCATTTCTGATGATGTTGACAATTACAAATTAAATTAGGCGT
ATACCAGACCCAATATCTTTGGAAGTTTCAAAATTCATATTAAAGGCTCT
CTTGTAACTTTTAATGCGATGAACGAGAGATACACTCGGTACAGAGTACA
AAAAACAGGACGCATTCAGGCAGCGCTTGTGAATAAAAAAAGGGAATAAT
GCAATAGAAAAATCTGAAGACATTGTCATCTGACCTTTTCGTTCCTTCCT
TTTTTAATCCTTGAACCTGAAAAAATACCAAATTTTGATGTCCCGGATAT
TAAAAGATGTTCAAGACATTCCAAAAATACCTGGAGGACGGACGAGATAG
ATTTCTACTTAATTTTTATGTATATATGAAACATAATTTTTTCTTTATAA
AATTAATTATACTTTTGATAGAACTTGAACTATCATTGGAATATTTTCTA
ATATTTTAAACCATGCTGGTATTTTAAACAGAAAATCTGGTGCAGG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00055568TCONS_00055568Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00055568-proteinTCONS_00055568-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_253supercontigscaffold_253:1145558..1148903 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.48	1.54	0.9	0.77	1.53	1.13	0.95	0.8	0.44	0.46	0.48	0.49	0.3	0.2	0.41	0.72	0.69	0.89	0.63	1.21	0.17	0.31	0.42	0.44	0.21	0.26	1.66	0.61	0.38	0.53