XLOC_034877 (gene) - C. hemisphaerica

Overview
NameXLOC_034877
Unique NameXLOC_034877
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_253:710253..719063+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_034877 ID=XLOC_034877|Name=XLOC_034877|organism=Clytia hemisphaerica|type=gene|length=8811bp|location=Sequence derived from alignment at scaffold_253:710253..719063+ (Clytia hemisphaerica)
aaacaacaagacatttgattggcttagacCGCAACAAAAGACGCCTCTGA TTGGTCGAGAAATTAATTTGAATAAGTTGTAAAACAATAGTATTTGTTTT CGATTGTGTCTGTAATGTCTGAACAAAGGAGATTGAAATTAAAGGTCTTC TTGATAGAGTATCAATTCTAAGTAGTCGATTTAGTAGTCTCAGCTTTGAT TATAGTATGCGGCTAAGACGATTTCtagtttttggaaaaaacttgaactg aaaaatgagtgttttttttttttaacataagAGGACTGGATCACTTGATT TGACAGTTGATGTTTCACCTATGAggaaaatttgatttattttttaaatt ttgttcgtCAATTTTTatagtgtttcttataaaaagaaaaaaagtcgaga TTTGACGCTTACCAAAACAGAAGATTGGTATAAACTCGAACACAGATAAT ATTGTGGTACCCCTTTTTGCCCCTTTTTAAACGCGATAACGGAACAACGA GCAAAACAAAATGATTATGGAGACAATGGATGTTGACCTATCAGTTGTCA AGAAAGAACGAATGGATTTGGACGGAGAATATGGAAACATTTTGGATAAT TTCACAACGGAAAATGAATATGAAAGCTTCCCCAATACTAACTCTATCGt aagtttcttgtttttatgCTACATTCTATCTCGTTTTACTTTCAGTTTTA TTTGTCTCGCTATGCCCCTTGCTATGacttgaaaatatgttttttctttc atttttgattttgctttttataagaaactcgGAATTTCAATAGTctgtaa aaatgacaaaatctaGATAAGGCGGACTATTTAGGATTAGAAGGGAGGAA AATTTCATGAATGAATTCatagaaatgtttattttttgctGTTTGTTATT CATCATTACTTTTAGAACAAATTCGCTAATCCCAGGGATAGATATTTGAC TATTTCCGGGAGGGGGCTTGACAATAGATCGATTGTATTTGTGAATgatg acagtgatgatgatATTATTTGGAACCATAGCATCGAACAAAAATTGTAT TCATTCTTTTAAAACGTTATACCCTCTGTTTGTTTACTTTCAATAATGAC ATCAAACAAGATTTTCTCTAAAAAATATGTCAGCGTAGTACAACTTAACG CTAACGGAGAAATAAGAGTCCTTGTTTTTCTTGTGGGTAATTCATAAAGT TCAAAAGACTTGCCGTTTAAgttgttttgtttatgttttgccCGTGCTAG TGAAAcaccaacaaatttttttgtgaaGAGCACTTCTCTCAAACTGTCGT CTTTCGGTACGACTCTTatcttttttgtgaaagaagaAAACAATTCGGTA TTTTTGCGTGCCTTGTAAATCAGCCAAGCgtttttttctgagaaaaagtt tttctttttcttgtctCTTTATATTCtgataaaaaatatgttttttgttg aaaaattgcaaCTTTGAATACCGAATCTGttgcttttttctaattttcat catacatcgagaacaaaacaaaacaactcCCGTCTTTTTTTCAATCGGAA GTGATTCTCGATCACTTTTTGTACTAGTTTCATTCAATCGAGATAAAAAT CAATCAAGCCGGATAAATTAGTCTCGAGTAATTAAGCCAAAATAACTACT CAAAGGAAAACCCATTTAATTTTTCTCTTATATAAATCCGACGATTAGTA AAGACGTAAGACCTTAACCATCcgtagaaggaaaaaaaatgcgTCATTGC CGTACTAAATGAGTCTTTTTGGGGTCCTGTTTGTAAACTTTGATAAAATT AACGGCAGCCACCGCctgtaaagattttaaaaatgtcaaggAATTTTAAT TCAGCggattttttggggaaaattcaaaaatttaaagtgTAGAGATCTTC GTTTTCATAAATTGCGCCGAAATTAAGGCCAGAGAGTGTTCATTGACATT GAAAAAACCATTTGGGTCTTTCGCAATTATTCATAACCCCTTCACGTGAT AAAGTTTAAAGGAAATTTTCACTTCGAAACTCATGCGAGTGTTGCGGTCT AATAGAGCGGTTACAGCGAAACTTCACGAAATAACCGTCATGCAAAGCTT TATAACCTTATCGTGTTCTTAAACTACACTTGCATTGAAAGAAAAAGCTC GAGATCATGTTTCCTTATCTTCAAGTCAAGGGGAGTTGAGGCTGTCTGAA ATCTACAGGCACGGAAATGAACCATAGTTTAAGTTAGGCATATTCGATGT CGATTTTCAactatcaaaacatatcaaaaagccGTATGTGTGCGTAAAGT ATACTGTGTTTTGATATGTACCCCTCCTAGAGTGGCAATGACAAACTGAA GGGAGTTTAATAACAAACTTTTGGATATAATACAAAAAGATGATAATAGG GGAATCGTTTTCAAGAGGTGCGAGATCAATAGTCAAAACTCGGCCTTCCT GTAAAATAGCTGTGCAAAGGGCTAAGCTAGGGCATTAAATTGCGGCCTTA TTTACTAGCATTTCCTTTTGTTGACTGTGAGAGTGTCCCTGAAAGATTTG acaggaaaaaataataacttttctTGTCATAAAATCACGTAATAGAAACC CCCTTAAATTGTAACATTTTTGAGGAGTGATACTGTTTTAATAACTTGGT TTATTAAGCTTTTCACCTTTTTATGATAAAGTCGCCAATGAGTTATAAGA ATAAAAGATACCACCTTCATAAAAAAAGGCAATGCCTGACAGAGGACTTT GTTTCGAACTGTCAAATCCACAGCTTGATTGGTTAACAGGATTTCATTCA TGAATAGTCTTGCTGTAATTACTCCGACGTtgtaaattttcattaaaaat tgctttttaatttcAACCAATCTTGTCAGAAGAGGaaatactttttttac tttactTGACTTTTTTGATAACAGGCCAATAGGAAGTAAATTAAAATACA ATGATTTGCGGGAAAATAATGTTTGCCTCCTTAATTGGTAAAATAACCTT GTATCAAGGAAGTTTTTAAATCACTGCATATTTCAGCATATTTTAACAAA TTCACTATTTAAAATGCATTTAAgaataaaaggaaaataaaattgaagtc ccgaaaaacttttaaaagtgaCATAAAATGACgagaacagaaaaaaaaat tagctttCTTAATTTTCCTGAAACTTAGAAATCAAtccttttttaaatgt tttgtcgGAGTTTGATATTTCCTGGAGTAAATGATTAGCATTTCTTTTCA CGTCTAAATAAGCATCGTCAAGAGGGAAGTAGGCGGGACTATGTTGCGTT CAAAGTTTGGCACATGACATCAAGGTGTGTGTCCGTGACTCTTTCCATGT CCTCCGTTTCTATGCGACATTTAACCTTGGTAATGCTGTACATTCATTGC TGTACTTAGTGCTCGGGTTTTATTGCTAATTTAAATGATCTAAACGTCTG TACTCACAAAAGCAAAGAGACTTTTTTGCAgcatttattcattttttcct tttctcaTTTTAGTCTTGCAACGAAGATGAAGACGTGAACGTTGATTGGT TAACCAGCTTCTTTGATGAACCAACGCACGATAGCCTGTCCGGATTAAAC CCACCATTAAGTGATATCTCGGACAGCGGAACCACTTTTTCACGAATCAC ATCTATAAATTGTACATCTGATATTTTACTCGATTCTTACCCAACTTTCT CTGAAGATTATGAAGCTACCATGCCAACATCCGAAACGACAAATAGCACA GAACTTATTAAACTTTCACCCAAAATTTCGCCGGCAGTATGCAGTAGTAA TAACCCATTCTTATCACAAACACATTGTAATAATAGTAAAGACATTGTTT TAGGCTCGTTGAAGAGTCATCCAGAACTGATGAAAGTGAAAACAGAGGAG CCTTCTAGCATAGAGGAACTACCTACTAAAGAAACAACTTCTCCAACACC AACAACCTTTCTATCGAATTCTACAGACACCAAACCacaacaaaaacttt tactctTCATGAACACCCCTGAAAATCGGGCCAAATTAGCGGGAACAAAT TTTAATATCATAAACGCGAACTTATTAAGTAAAATatctggaaatcaaaa tcaagacTCTTCTGGCAATAATATTAATTTGAGTACTAGTAATACGAGCA AACAAACAATGAATCTAATTAATTTGAAGAAATGTATTAGGTTAAATAAC ACAGTACGTAGCAAAGAGGACTCTTTAATTAAACCGACGTCAGATGATAC GGTGACGGCTTCCACTGTTAATGCAACGCTGCAATCCATAATGGCTGCCA ATCATCAAAGagagaagaaaattttaccagTAGATATTTTGAACGGACAC ACGTATGGCTTGACGCGCAAGGATAGTCATGATATTGACTCAGGTAAGAT TTCAATTCGACTGACTTCGGTACTTTTCTGCTATCCGGATCATTTCGCCT GAATTTCCGTCGCTCAGACAAATAGTCTTATATATTGTCAAATTGTTTGC aagcaatttttcaaattattttggttttttaAGAATGACGGGCGACATAA TAACACTCTGAAACACGACCACACGGAGCTTCGATTTCTCGTTTATATTG GTGGTCTCTAAAGTATTTTTATCTGACGAAGCCGCAACCAAATTTAgagt tttatagaaaaactctCGAAATGGGTTTTCTAAATAGAGTACATAGGCAC TATAAGCAAATGTGCCTGGAAAATCTTTAATGTCTTTAATAGATTCTTAT ACTACTTTCCAAATGGTAGCTCCTTTTCATAGATACGGAAGCAAATACta tgttttcaaatatttctgaaATTGAGGGTTTCCTctgaattttatttgaa atttcagtTTTCAACTGTTTGTGAAGTCGAATATTTCTCTTAAATTTCGT TATATGTGCTTAGCTGCTTTTATAACCTATACGATAATATTGACCTTCAT ATTATTTCTCAAAGCATTCTTAATCTATATTTGAAGTTTGATCAactgta ttttaagaaaattaataGAAAAATGAAGAGGAGAATAAAAATCGGAGGTT GTCGGagctaaataaaaaaacaatgaaattcccACTCGTTTTCTAACGAT TTTTGAAACTCGTGTGTGAAAATTTCGTTATTAGGCAACCATTTCATAAA TTTAGAATTTCGTTACAATAGGAAAGGTGCAAATATCTTTTTCTTCTCTA AAGAAATTGCTCTTCGTTTCAACGATTTGAAGTTTCGTAGCAACATCGAC TTTTTCATATCACACTTTTCTGTCATATGTAATTTCTCGTGTAACCGAAA ATTTTCAGCTTCGTTTTCGTTAGCCtcttttacttaaaattcgaaaagtt aacTAAAAAAGAACCAAGTCTTCATTCCTCTTCAAACTAAATCCAGATCC Agtgtcaaaacacttgaaaggcttctatttttcgaaaatcgtcaaagtgg aactcactaagaaacgaaaCGGGGTGAAAAATcctggtttttggtgaggt actcGCTATGGTTTCCCCTGCTTTTGCCAAACTCCCGAAAGGCCTTCCTT CCGAACCTCTCAAACATAGAGGCATATCTGCTATTAAAACTAACTATAAG AACTCTAGACTAATGATAGTTTGTCAAGCCTACTGCATTGCAAATTTTGA CTAACTTGCCCATTCACATTTACGAAGATTTGAACTGTAGCGGTTATGAA TAGCTTCAGGTCCTGTAGAGGTGTGGATGCATCACTTTTTATGTTGCTCA ACTTGACAAAAAAGTGATACAACATTAATTGTCCAATCACTGTTCTTCTT TATCACACAGGTTACGAGTCACCGACATCCTCATCTGGATCTTCACCCTG TTCTCCACCAATCGAGTTATCGGATCATCATCGCAAAGATGTCTGCTTAT CCAATGAAAATATTCAATACATCGATATTGTGAGTAACCAAACCCTTTTT GTTGTAGAAGCAAAATAGTTACCTCTCCCCGAGCTCCAAATGAAGCCATA CATCTCGTTTGAGATTGAAACTGTATATGGTGTATGGACACTGGTAGCAT AGAAGGGTTTTAAATAGATTACTGCTTCTTACCCTTGTTGAATATGAATT GAATGGTTAGAGTTACAATACCCTTGAATCGATCATTTCTGCCTGTTGCA AACGTTAAGgttcaatttctttctttttttccaaacaGCCTCCACATGAA CGCCAACCTTTCTATCTATCTGAAGAAGAGAAGCGTACACTCATCATGGA AGGTCTTCCCGTACCGCAAGGTTTACCGCTTAACAAATCTGAAGAACGCG CCTTGAAAAAGGTTCGAAGGAAAATCAAGAACAAGATCTCCGCTCAAGAA AGCAGaaggaaaaagaaagaatatatGGAATCGTTAGAGAAAAAGTGAGT ACTATTTTCATCCTAAGCAATATTTTACGCCGGCCTTTATTCAACGACAG CCAAACAAAATCTCCAATAAGGGCTGGTGTAAAGAGGGCCGACAAGTAGC TGAATTATCATTAATCAGCCTTCGTATAGGTGAATTTGTAAAGGGAAAGG CCAGGGATTAGAAGGGGAAGAAATTTTACAGGAAAAGGTTAGATGACGTT CCTAAGCAGCTAAAAACTAACCCCGAAAAATTCGAAAGAAtgtaaaaagg aaagaaaactaTCATCAGTACAATGACTCACGTTTTCTATTTCTTTCATc ggaaaaattctctttttaatCCTTATGGATgacaggaatttttttaaaac tagaCGTCTTTGTGTGCAGCCTTACAACGGAAACATTGTAAAACTCTTTG TTGATCCTATATTTGATACACCTAGCAGTCTACTACAATGCATTCTTAAT AGCAGTTATTTAACTACAGAGGTATTCCACTTCCATAACCCATTAGACCT CATTATAGACAATACAATCAATGTAATTATACTTTGTTTTTTGTGTTCAT TTTCCGCGACGCGACGGGGAATTACGAGAGCTCTTTTTCCTTTTCCGATA TCGAANCATTTTCAGCGACGCGACGGGGAATTACGAGAGCTCTTTTTCCT TTTCCGATATCGAATTTGTATGATAATTTTGCATCAAATCAGCctgtttt tttctcaataatgATCGACCTTGTCTATTCCACCTACTGTAATGTGAGGG AAATTGTTATATACAGCCCTGTGTACAGTACACCGGTTCAAGTAATAAAG GGCGTAAAAATCTCGATCAAGATCCATTATTTTCAACTCGAGCATTTTCC GagcctttctttttcttcaaaccGTTGTACCTGACATCTaatctttattt gcttttaATTTCCTTCAGAGTTGACTGTTATGCATCTGAAAACTCAATAC TCAAGAAGAAAGTGGGAAGTTTAGAAGTTGCCAATCGTTCATTGATCATG CAAGTACAGAAGCTTCAAGCCCTTGTCACAGCAAAGATTTNGTTTAGAAG TTGCAAATCGTTCATTGATCATGCAAGTACAGAAGCTTCAAGCCCTTGTC ACAGCAAAGATTTCTCCACCTTCTCCTTCCAATGACAAGCAACATGAAAT CATTGGTAAGTCCTTAACAATTGTATTTCCGAAAAAACTAAAACGTGGCT CCTCGTCcctgtgtatcccaggctttatttacattaCTAATGAACGCTAG TATAATCTGGCGCTATCAGTGAGCATCAAAAGGCCGATGATatgcaggga acgaggttgtgtTGTGAGTGTGAGTTGACCTTGAAGTTCTTAAACGTCCT TCCTTTATGGAATGTTTTCTTTATCATCTAAGGATATCTGATAAGCTAGA GATTATTGATGTCTACATAATGACATTTCTTTAAAACTCTCCAATAATCT TTTAGAATTAccttgatttgaattttttttcggcatATTTCGGAGAATTC CTCTACAAATGACAGAGGGAGAAGAGGGTGACCAGTATATAACAAACTTG AGCAATTCTTTGCAAAGGTGCAATATCTGTGTTGGGAGTCCACTGGGAAA TTAATTCGTCTGATTTATTTAATCATTTGCTGGGATAATTATGACTTCAG ATGATTGATCAATATGATCAAAATGTGGGTTTTCTCTGATACTTCTACAA GACAAATGGTATATTTTTTAACCATTCtttattatttctttattttagac GTTGAACAATGAACTAGTCGAAATCAAAATGGAGACAACTTAATCAATCT TTCGGAGAAGCAGGCCacttttatgacttttttataGATAGATAGGGGTT TAAAAAcacaatcaaacaaaatttgtaaataataacTTTTAATACAGCTG TATCAATATTTTCGTGTACAGTGATAGCCCCTTAACCCCCTGAATAACCA ATATCCCAAATAATTTTGTAAGTAgagaatttcaacatttttttagaaaa ttgctgACTCAGCATATTGTTATATCATAGACGCTTTGGTGACGAATTCG TTGTTGTTTAGGGTACTAATCCCAAAATGACTTTCAATAAACgtcaaata aaatattatttttggaccatttgaaatattttaaatatgCAACCCCAAAT AATTATTATATTGTATTAACACAATTTAACTTATAGGTTTTCTTACCCAA CAAATTTTATCAGTAACTTAGCTAGCTTTTTATTTATTACCATTTTTTCC TCCCTGCTAATTTGTAGTAAaacgaaattcaattttttgaaaaaaattca aatgaatATATAACATGAATCGACATCTTACTTCGCGTGAAcaataatta taataataatgatgatgCCCATTTCTTGTTACCTCATTGGAACCAATATT TTTTATGCAGG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00055421TCONS_00055421Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00055421-proteinTCONS_00055421-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_253supercontigscaffold_253:710253..719063 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.86 0.5 0.17 0.28 64.71 53.65 41.79 47.42 22.3 20 13.71 24.19 14.87 10.22 16.62 29.26 26.02 20.16 5.56 9.99 11.27 12.21 10.76 12.78 12.62 17.96 1.53 0.84 2.43 2.27