XLOC_034692 (gene) - C. hemisphaerica

Overview
NameXLOC_034692
Unique NameXLOC_034692
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_249:59011..64176+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_034692 ID=XLOC_034692|Name=XLOC_034692|organism=Clytia hemisphaerica|type=gene|length=5166bp|location=Sequence derived from alignment at scaffold_249:59011..64176+ (Clytia hemisphaerica)
taaataatcgagctttgaaaaaatcttgagtatcgattacctatcgattc tatcggttaatcgatatctaatccatcgattatatacttatcgattattt atcgattactcaagattatcgattatatcgattaactacgtcTGGTCTGA AAGGCTGAacaaaaatagttaaaaaaacaacaaagttaccgttttattta gagaaggggcattattgaatggtttgcctttttggaggAGCATTATTAAN TTGTCGCTGGTTTGGATGCAGGGGATGGCTTCCCAACACAAGACGCCCGA TCCAATGAAGGTACATCTTTTTTAGGCTAGAGACATTATGCAAACACagt cattaaaaaattaatcaaatttcGAAGCCAAAGGGCATCTTAGACTATAA CGCTCGCAGGTAACAGTtcaacgaaatgaagccattcaaTTGGTTGCATG GGacgtaaaaattgaatttaaccaatagaatgacttcatttcgtttcgaa GCAAAATGGAACCGTAGCGTGTGTCAGTTTTTTATAATATAAGCAAAAGA TTCTAAATGAAATTAGGCCCCCTCCCTATGTAATAAAAAACAATACGTTA AATTAAATCATTTATATGAAAAACAAGCAGtaacatgttttttattttta tttaactatttcatttttttaacttaattggaaacaaaaaaaatttttct attgttgACATACCCATACCTAAGGCATATTATATATCCTTACAATGTCT TCTCTCATTTTATGTCAATTTTAAAACAGATAATTGTTTGTGTATTATTT GTTGCAGTGGTATATGGCATGAAATCTGCTTATTTTTCAGTGTTAAAAGT TCCCTTCcaacggatttccgtctcagcgAAGTATATGAAGAtgcttttta cgtttttttgtcgTTGACGTAGGCTTTGACCGTAGCATGAatgtagagca tccagctacggtgcgcaagggtgtgagttcgatccccagccgggccatac caaagattctcaaaatggtacttgatgcctctctgcttgatgctcagcaa ctaaagagacggatcaaggttaagtggagaaatccagggaaaggagtgtc gccctcccctaccttcgggtagacagctatacggaAAGGGAGTCTTCGGG TCGCcgtcgactgcggtcgcaaacttacttactttttttaCTTAGGCTTT GCTTTAATCACTGCTTATTTATTCCACAGGTCTTGATTCGCCGGAAAAAA CACCGCAGAAAGATCAAGATGGTCGTTTCTACTGTCCGCTGTGTCCGAAA AGTTTCAAACACCGTTATGATTACATCATGCATCAGAAGACTCACAGCGG CACAAACCCCTATTTCTGCAAAACCTGTGATATATATTTCCCAAGGAAAT CAAAGTTAACGAAACATTTGAAAACGAAAAGCCACCAAAGGAAGTGTTCC AACCAGACTATGGAGGATTCTACTGAGGAAAGTTGTTTGGATGATACCAC TGATGAACCACCTGCCAAACGGAATCGCCAGGACTTCGAGCAATCTGTGG ATGAAAACCAAAAGCCTTTGGAATGTCAACATTGCTGCCAGAGGTTTTCA AATCTAcacttttcttcttttaaaggccgatctccactttcgcgcgaaaa tgAGCGAAAACCTTTTCTTAATCATTTTTGCCAGCAGAAAAAATTACGTC ATTAAAAAGTTTCGAGCGAAAAAATAAACCGTTACGTCATATTtgcccaa tggaattgcttcattttttaaaccGACAAATGGCCTTGGTCAAAATCTTT CACTCATtttgcgcgaaagtggagaccggccatAAGGTGAACTATTTTCA TGACACTCCTTAAAAATTGTTGGGAACTGGACCTCTGCATTCTATtcgaa agaaattaaatttgttgttctacgggcccgatcGACTTTTTTTTCACTGG AATTCCAAAATATACTCAGGTTTCAACAGCTGTAAATGTtgcagccaatt cgattgacttccaaatttgccatactcaccaactttgccaaatctacaat ttcaatgtcaaaagatcatagcttcatggcaaatttgtacatcgctacgc cgccattatgatttccgttttgtgatgcttagtcagcagttttctgtcgg cgtttgtaaagtgaacgattttttaaccaatcaaattgccgatcggtatt gttttgctttagcattggaaggtcttctatttttaaaatctttggcaaaa gtggcaaaattggaacgaaaagaacacaggtctcgtgggaatattgtttt gtatggagacgtatggaggtaagttccaaaaatgccaagaatgccaagaa tgccagattcaccacatcttttttatttggcatttatggcactcaaattt tgccacatttgccaaatttttgtcaagtcgaatgcaaaataattggcaat cagggcaaaaatggcatattttgaagtcaatcgaattggctgttgCATAT CAAGTTTTTCGAAAAATCGCATACCAGgcgcaaaatgccattttagtGAG CAACCGGACCAAATTACCCGACGATCTGCCTAACTGCTTAGTTTTTATGT TTAACATCATGACTAATGTTCCGGTTCGAGTTGCAGAAAGATTCGAGATA TAGAGATTCTCGACTGTACATTGTAAAACATTTTCcaataaagggataat cagatggctTAAGATATTTGACCTTCTGTATGAGGTCCCAGTGTCTTTCG AAGTCGAGAtatcataatttgaaatttttaaagatggGTTCTTACATGTT CCgtcaaatttctattgttttcttgtCAAAAACTTGTTACTATAGAATCT GATTATTCGTTATTTTACATGTACACTGGCCACTAATTACTAATTACTTA TGATATTTTGAGGTCTTGCTCTGGTTAATAGAAGGAATCCATTTTCCAAA TATCTCAAATCAATTGATCATCcttttagaccatgttcacacgttactgt tccgttgcCCTCCTGTATGATTTTTGTTGCGGATCGAGTGTATTCATATA GTATTCATATGTATTCatagttccgttccgatgaaaaaagtggagcgaaa ccgtttcgatctttttttctttgtaaacgtcttctttttgacgtttagaa ttttgaattttgacgttcatTTGTTTCGGAActgtttcgtttcggaacgg aaccgtaacgtatGAACCGTAACGTATGAACATGGTCTTAAACATCAATT TTAGATTCCCCAGTGAAGAGGAGAAAAGCAGTCACCAATGTTGTCTGTTG AGAGACAAGAAACCGAAAATCCAGCCTAAAGAATATCTCAAATCGCGTGC ACATTACAAGAAGTTCGTCTGTCCGTTGTGCGACGTGGAGTATTTCTCTT ACGTCGAACTAAACCAACATTTAACAACCGAGCATACGGTTACGGAAGAG ACGACGTTCCCTTGCAAGACGTGCGACGTCACTTACCAATCGAAAGACAA ATGGGTCCAACATCTAAACGACACAAAACACATGTNGCGACGTCACTTAC CAATCAAAAGACAAATGGGTTCAACATTTAAACGACACAAAACACATGTC GTTACTACAACCTTATTTCCGCGCCACATGTTGTGAGAAGACATTCAAAA CACATAAAGCGTGTTATAATCACGAGCGTGTCCACACTCGGTCCAGTCCC TACCACTGTGCGAGGTGTGATCGATATTTCTTGAAACGACACCATCTGAC TGTTCATTTGGAGGGTTGTGTAGACAGCGAACGACCCTACCAATGTCCCT TCTGCGTGCGAACGTATAAGACAAGCAGCCAGTTACAACATCATTTAGAA GGCGGTCATTCCTTCCAATGCGCGACGTGTCTGGAAAACTTCACGTGTAA ACCGCACCTTAAGACACATTTAGAAGAATCGCCAACTTGCATCAAAAATA TTTGCTCCAGATGTAACAATTTGGAATTTGAAACCTACGAACAGCTTTTA AAACATAAAGAAGAATCTCATTCGACGAAAGGCCGTAAAACGTTTTCGTG TTCCGATTGCGGGAAAACGTACTGCGAGGCGTTCAAGTTGAAGCAACACA TGAAGTGGCACGAGACAGGTCGGTATCCGTACCAATGTACCGTGGAAGGA TGTACTATCATCTGTTACAAGAAGTCGAAACTGGATTCACACCATAAGCG GGTCCATCTGAAACTGATGGAATACGAATGCAGTGCATGTGGCGAAGagt tcaaaacaaagaaaaatttggaCGAACATTCGAGCAAAGTTCACGGTACC GAATCATTCACATGTCCAGTATGTGATAAAGAATTTTACAGTCTTCGAAC GTTCAAAGCACACGAACTAACACACTCTAAACTTCCAACGCAAACTCATT TGAGCAACACTTCAGCAATCAACAATAGTAGAAACACTACTAACGGAGAC GATGTTTTGCTTNCACTTCAGCAATCAACAATAGTAGAAACACTACTAAC GGAGATGACGTATTGCTAGATTTAAGATGTCTGACTAATTTGAGCATGGC TTTGGATGGTAGTGATTCAATGAGAGAATCGCGCGGTGATGTTGACGCGG AACAGAAGATGGATCTCAAAATCCCAGCCATTATGAAAAGCGAACACTTG ACAAACTTCTCTACTGAAGATGCCGAGGAAGTCGCCGGCACAGAAATCGA GGGTGTCGAAATCGAAGCAGAGAACGAGATGGCGGTTGATGATATTCCAC CACCCACCGCGCAATCACCGCCCATTGTTACAGAGGGCGGGGAGGAGATC GTGATTGTTGAAGGGGAGCGAGCGAAAGAATCATTACGTCAACTGTTGGC ACAGCAACAAGTCACCATCAAAATCGCTTCTTCAGAGGACCACCACAACG AAGGGGACGGCCCGCATACGACCGTTACCTCGGAAACCATGCAACAGCTC AAAAGCACATTGTCCGATCTTCTTTCCGCCACCCTGGGTGGGCAATCGTC TTCTGAAACGGCAACATCGACCACGGGTGGATTGGAGATTCAAGGTCAAC CTCACCCAGATGACGACGGTGTTGTAGAGATTGTTTTGATGCCCACCTCG TCTGACCAGGCATCTGATAATGCTGATCCCAGTGCCTCGGAAGAATGAAA GCGCTCGAATTAACTG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00055067TCONS_00055067Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00055067-proteinTCONS_00055067-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_249supercontigscaffold_249:59011..64176 +
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
ZNF10zinc finger protein 10 Homo Sapiens
ZNF548zinc finger protein 548 isoform 1 Homo Sapiens
ZNF570zinc finger protein 570 isoform 1 precursor Homo Sapiens
ZNF792zinc finger protein 792 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
30.04 27.09 12.83 8.65 43.82 34.51 25.79 28.06 13.16 17.89 15.69 12.22 11.93 12.41 11.68 13.09 16.01 14.78 9.83 8.35 11.76 12.35 29.8 27.88 19.63 20.13 6.38 5.21 23.62 27.56